RNA–Protein interactions for RNA: ENST00000637981.1

CACNA1A-256, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,346 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-256	ENST00000637981	RRP36	Q96EU6	259 aa	Known RBP	10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	FBXL18	Q96ME1	805 aa		10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	AMN	Q9BXJ7	453 aa		10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	OSBPL7	Q9BZF2	842 aa		10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	KCNH6	Q9H252	994 aa		10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	TUT1	Q9H6E5	874 aa	Known RBP	10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	RIOX1	Q9H6W3	641 aa		10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	MLXIP	Q9HAP2	919 aa		10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	SEC63	Q9UGP8	760 aa	Known RBP	10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	COL4A6	Q14031	1691 aa		10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	MUC6	Q6W4X9	2439 aa		10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	NLRC5	Q86WI3	1866 aa		10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	C19orf67	A6NJJ6	358 aa		10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	PFKFB2	O60825	505 aa		10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	CAND2	O75155	1236 aa		10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	TGFB3	P10600	412 aa		10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	RXRA	P19793	462 aa		10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	HOXA13	P31271	388 aa	Predicted RBP	10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	HOXC8	P31273	242 aa		10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	GHRHR	Q02643	423 aa		10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	TMTC3	Q6ZXV5	915 aa		10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	RPAIN	Q86UA6	219 aa		10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	VSIG10L	Q86VR7	867 aa		10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	TRIM22	Q8IYM9	498 aa		10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	IL31RA	Q8NI17	732 aa		10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	ZFP91	Q96JP5	570 aa	Predicted RBP	10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	IFIH1	Q9BYX4	1025 aa	Known RBP	10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	RNPEP	Q9H4A4	650 aa		10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	MAP3K20	Q9NYL2	800 aa	Known RBP	10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	PNMA6F	A0A0J9YX94	578 aa		10.83	□□□□□ -0.68
CACNA1A-256	ENST00000637981	ZBTB5	O15062	677 aa		10.83	□□□□□ -0.68
CACNA1A-256	ENST00000637981	NCK2	O43639	380 aa		10.83	□□□□□ -0.68
CACNA1A-256	ENST00000637981	PPP1R11	O60927	126 aa	Predicted RBP	10.83	□□□□□ -0.68
CACNA1A-256	ENST00000637981	LGALS2	P05162	132 aa		10.83	□□□□□ -0.68
CACNA1A-256	ENST00000637981	CCND2	P30279	289 aa		10.83	□□□□□ -0.68
CACNA1A-256	ENST00000637981	CTNNB1	P35222	781 aa		10.83	□□□□□ -0.68
CACNA1A-256	ENST00000637981	IRS1	P35568	1242 aa		10.83	□□□□□ -0.68
CACNA1A-256	ENST00000637981	CCT2	P78371	535 aa	Known RBP	10.83	□□□□□ -0.68
CACNA1A-256	ENST00000637981	CLUL1	Q15846	466 aa		10.83	□□□□□ -0.68
CACNA1A-256	ENST00000637981	HFE2	Q6ZVN8	426 aa		10.83	□□□□□ -0.68
CACNA1A-256	ENST00000637981	SAMD3	Q8N6K7	520 aa		10.83	□□□□□ -0.68
CACNA1A-256	ENST00000637981	APBB2	Q92870	758 aa		10.83	□□□□□ -0.68
CACNA1A-256	ENST00000637981	MTMR8	Q96EF0	704 aa		10.83	□□□□□ -0.68
CACNA1A-256	ENST00000637981	TPCN1	Q9ULQ1	816 aa		10.83	□□□□□ -0.68
CACNA1A-256	ENST00000637981	PCDHA1	Q9Y5I3	950 aa		10.83	□□□□□ -0.68
CACNA1A-256	ENST00000637981	RALGAPA2	Q2PPJ7	1873 aa		10.82	□□□□□ -0.68
CACNA1A-256	ENST00000637981	DOCK5	Q9H7D0	1870 aa		10.82	□□□□□ -0.68
CACNA1A-256	ENST00000637981	hCG_1984214	I3L0E3	225 aa		10.82	□□□□□ -0.68
CACNA1A-256	ENST00000637981	NOP56	O00567	594 aa	Known RBP	10.82	□□□□□ -0.68
CACNA1A-256	ENST00000637981	GNAT1	P11488	350 aa		10.82	□□□□□ -0.68
CACNA1A-256	ENST00000637981	IFNAR1	P17181	557 aa		10.82	□□□□□ -0.68
CACNA1A-256	ENST00000637981	CDC27	P30260	824 aa		10.82	□□□□□ -0.68
CACNA1A-256	ENST00000637981	ADD1	P35611	737 aa	Known RBP	10.82	□□□□□ -0.68
CACNA1A-256	ENST00000637981	LTBR	P36941	435 aa		10.82	□□□□□ -0.68
CACNA1A-256	ENST00000637981	STK3	Q13188	491 aa		10.82	□□□□□ -0.68
CACNA1A-256	ENST00000637981	CTC1	Q2NKJ3	1217 aa		10.82	□□□□□ -0.68
CACNA1A-256	ENST00000637981	RAB11FIP4	Q86YS3	637 aa		10.82	□□□□□ -0.68
CACNA1A-256	ENST00000637981	FIBCD1	Q8N539	461 aa		10.82	□□□□□ -0.68
CACNA1A-256	ENST00000637981	SRBD1	Q8N5C6	995 aa	Known RBP	10.82	□□□□□ -0.68
CACNA1A-256	ENST00000637981	ZNF713	Q8N859	430 aa	Predicted RBP	10.82	□□□□□ -0.68
CACNA1A-256	ENST00000637981	POP1	Q99575	1024 aa	Known RBP	10.82	□□□□□ -0.68
CACNA1A-256	ENST00000637981	C11orf84	Q9BUA3	381 aa	Predicted RBP	10.82	□□□□□ -0.68
CACNA1A-256	ENST00000637981	RNF26	Q9BY78	433 aa	Predicted RBP	10.82	□□□□□ -0.68
CACNA1A-256	ENST00000637981	BCAS3	Q9H6U6	928 aa		10.82	□□□□□ -0.68
CACNA1A-256	ENST00000637981	SETD4	Q9NVD3	440 aa		10.82	□□□□□ -0.68
CACNA1A-256	ENST00000637981	MUTYH	Q9UIF7	546 aa		10.82	□□□□□ -0.68
CACNA1A-256	ENST00000637981	C5orf67	F2Z3F1	127 aa		10.81	□□□□□ -0.68
CACNA1A-256	ENST00000637981	GCOM1	H8Y6P7	765 aa	Predicted RBP	10.81	□□□□□ -0.68
CACNA1A-256	ENST00000637981	MBTPS2	O43462	519 aa		10.81	□□□□□ -0.68
CACNA1A-256	ENST00000637981	CSPG5	O95196	566 aa		10.81	□□□□□ -0.68
CACNA1A-256	ENST00000637981	PLEKHA8P1	O95397	391 aa		10.81	□□□□□ -0.68
CACNA1A-256	ENST00000637981	RB1	P06400	928 aa		10.81	□□□□□ -0.68
CACNA1A-256	ENST00000637981	POLR2M	P0CAP2	368 aa		10.81	□□□□□ -0.68
CACNA1A-256	ENST00000637981	BMPR1A	P36894	532 aa		10.81	□□□□□ -0.68
CACNA1A-256	ENST00000637981	DLX2	Q07687	328 aa	Predicted RBP	10.81	□□□□□ -0.68
CACNA1A-256	ENST00000637981	SSRP1	Q08945	709 aa	Known RBP	10.81	□□□□□ -0.68
CACNA1A-256	ENST00000637981	HYAL1	Q12794	435 aa		10.81	□□□□□ -0.68
CACNA1A-256	ENST00000637981	SMAD2	Q15796	467 aa	Known RBP	10.81	□□□□□ -0.68
CACNA1A-256	ENST00000637981	ME3	Q16798	604 aa		10.81	□□□□□ -0.68
CACNA1A-256	ENST00000637981	FCHSD1	Q86WN1	690 aa		10.81	□□□□□ -0.68
CACNA1A-256	ENST00000637981	HOMER1	Q86YM7	354 aa		10.81	□□□□□ -0.68
CACNA1A-256	ENST00000637981	CCDC82	Q8N4S0	544 aa		10.81	□□□□□ -0.68
CACNA1A-256	ENST00000637981	WASF1	Q92558	559 aa		10.81	□□□□□ -0.68
CACNA1A-256	ENST00000637981	GTF3C6	Q969F1	213 aa		10.81	□□□□□ -0.68
CACNA1A-256	ENST00000637981	MFSD14A	Q96MC6	490 aa		10.81	□□□□□ -0.68
CACNA1A-256	ENST00000637981	PIGS	Q96S52	555 aa		10.81	□□□□□ -0.68
CACNA1A-256	ENST00000637981	LARP6	Q9BRS8	491 aa	Known RBP	10.81	□□□□□ -0.68
CACNA1A-256	ENST00000637981	LMAN2L	Q9H0V9	348 aa		10.81	□□□□□ -0.68
CACNA1A-256	ENST00000637981	FAM217B	Q9NTX9	383 aa	Predicted RBP	10.81	□□□□□ -0.68
CACNA1A-256	ENST00000637981	RWDD3	Q9Y3V2	267 aa		10.81	□□□□□ -0.68
CACNA1A-256	ENST00000637981	GRM6	O15303	877 aa		10.8	□□□□□ -0.68
CACNA1A-256	ENST00000637981	PRPF3	O43395	683 aa	Known RBP	10.8	□□□□□ -0.68
CACNA1A-256	ENST00000637981	CYTH3	O43739	400 aa		10.8	□□□□□ -0.68
CACNA1A-256	ENST00000637981	LINC00271	P0C7V0	271 aa		10.8	□□□□□ -0.68
CACNA1A-256	ENST00000637981	XBP1	P17861	261 aa		10.8	□□□□□ -0.68
CACNA1A-256	ENST00000637981	GTF2F1	P35269	517 aa	Known RBP eCLIP	10.8	□□□□□ -0.68
CACNA1A-256	ENST00000637981	ARHGAP4	P98171	946 aa		10.8	□□□□□ -0.68
CACNA1A-256	ENST00000637981	SCRN1	Q12765	414 aa		10.8	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms