RNA–Protein interactions for RNA: ENST00000637881.1

CDKL5-211, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 1,782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-211ENST00000637881 PAFAH1B1P43034 410 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 C1QTNF8P60827 252 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 PDE1BQ01064 536 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 TCIRG1Q13488 830 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 PNOCQ13519 176 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 INAQ16352 499 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 CNPY1Q3B7I2 92 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 SLC44A4Q53GD3 710 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 WASHC2DQ5SRD0 308 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 FOXB2Q5VYV0 432 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 THOC7Q6I9Y2 204 aaKnown RBP8.58□□□□□ -1.04
CDKL5-211ENST00000637881 KANK3Q6NY19 840 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 RBBP8NLQ8NC74 664 aaPredicted RBP8.58□□□□□ -1.04
CDKL5-211ENST00000637881 KLHL29Q96CT2 875 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 HIC2Q96JB3 615 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 PBKQ96KB5 322 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 NEK1Q96PY6 1258 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 CENPKQ9BS16 269 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 METTL22Q9BUU2 404 aaPredicted RBP8.58□□□□□ -1.04
CDKL5-211ENST00000637881 SPATA16Q9BXB7 569 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 ECHDC1Q9NTX5 307 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 SUCLA2Q9P2R7 463 aaPredicted RBP8.58□□□□□ -1.04
CDKL5-211ENST00000637881 PPP1R1BQ9UD71 204 aaPredicted RBP8.58□□□□□ -1.04
CDKL5-211ENST00000637881 MAN1B1Q9UKM7 699 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 ECM29Q5VYK3 1845 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 TMEM247A6NEH6 219 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 ERVV-1B6SEH8 477 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 ENC1O14682 589 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 CETN3O15182 167 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 RAD21O60216 631 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 DTNBO60941 627 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 CTDNEP1O95476 244 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 OAS1P00973 400 aaKnown RBP8.58□□□□□ -1.04
CDKL5-211ENST00000637881 CHGBP05060 677 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 CCNB1P14635 433 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 TRIM21P19474 475 aaKnown RBP8.58□□□□□ -1.04
CDKL5-211ENST00000637881 HPDP32754 393 aaPredicted RBP8.58□□□□□ -1.04
CDKL5-211ENST00000637881 SARSP49591 514 aaKnown RBP8.58□□□□□ -1.04
CDKL5-211ENST00000637881 FXR1P51114 621 aaKnown RBP eCLIP8.58□□□□□ -1.04
CDKL5-211ENST00000637881 RAB15P59190 212 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 KCNJ2P63252 427 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 CDK17Q00537 523 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 OCRLQ01968 901 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 GSTM4Q03013 218 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 FMR1Q06787 632 aaKnown RBP eCLIP8.58□□□□□ -1.04
CDKL5-211ENST00000637881 MCL1Q07820 350 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 PLS1Q14651 629 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 CFAP157Q5JU67 520 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 C16orf87Q6PH81 154 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 C3orf62Q6ZUJ4 267 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 ALDH16A1Q8IZ83 802 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 SYNE4Q8N205 404 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 CXorf38Q8TB03 319 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 ZNF274Q96GC6 653 aaPredicted RBP8.58□□□□□ -1.04
CDKL5-211ENST00000637881 ARHGEF10LQ9HCE6 1279 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 HELLSQ9NRZ9 838 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 NDUFA13Q9P0J0 144 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 LIMA1Q9UHB6 759 aaKnown RBP8.58□□□□□ -1.04
CDKL5-211ENST00000637881 TRMT112Q9UI30 125 aaKnown RBP8.58□□□□□ -1.04
CDKL5-211ENST00000637881 LUC7L2Q9Y383 392 aaKnown RBP8.58□□□□□ -1.04
CDKL5-211ENST00000637881 PCDHA5Q9Y5H7 936 aa8.58□□□□□ -1.04
CDKL5-211ENST00000637881 TAF1LQ8IZX4 1826 aa8.57□□□□□ -1.04
CDKL5-211ENST00000637881 GRID2IPA4D2P6 1211 aa8.57□□□□□ -1.04
CDKL5-211ENST00000637881 H0YGN5 161 aa8.57□□□□□ -1.04
CDKL5-211ENST00000637881 P4HA2O15460 535 aa8.57□□□□□ -1.04
CDKL5-211ENST00000637881 TEX33O43247 280 aa8.57□□□□□ -1.04
CDKL5-211ENST00000637881 STRNO43815 780 aa8.57□□□□□ -1.04
CDKL5-211ENST00000637881 SRGAP2O75044 1071 aa8.57□□□□□ -1.04
CDKL5-211ENST00000637881 TACC1O75410 805 aa8.57□□□□□ -1.04
CDKL5-211ENST00000637881 ABL1P00519 1130 aa8.57□□□□□ -1.04
CDKL5-211ENST00000637881 IGKV5-2P06315 115 aa8.57□□□□□ -1.04
CDKL5-211ENST00000637881 ITGA2BP08514 1039 aa8.57□□□□□ -1.04
CDKL5-211ENST00000637881 PDHA1P08559 390 aa8.57□□□□□ -1.04
CDKL5-211ENST00000637881 KRT16P08779 473 aa8.57□□□□□ -1.04
CDKL5-211ENST00000637881 MMP10P09238 476 aa8.57□□□□□ -1.04
CDKL5-211ENST00000637881 TPBGLP0DKB5 382 aa8.57□□□□□ -1.04
CDKL5-211ENST00000637881 TMOD1P28289 359 aa8.57□□□□□ -1.04
CDKL5-211ENST00000637881 USP11P51784 963 aa8.57□□□□□ -1.04
CDKL5-211ENST00000637881 CACNA2D1P54289 1103 aa8.57□□□□□ -1.04
CDKL5-211ENST00000637881 RAD23BP54727 409 aa8.57□□□□□ -1.04
CDKL5-211ENST00000637881 EIF3BP55884 814 aaKnown RBP8.57□□□□□ -1.04
CDKL5-211ENST00000637881 HERVK_113P62684 666 aa8.57□□□□□ -1.04
CDKL5-211ENST00000637881 HPCAP84074 193 aa8.57□□□□□ -1.04
CDKL5-211ENST00000637881 MDM2Q00987 491 aaPredicted RBP8.57□□□□□ -1.04
CDKL5-211ENST00000637881 SLC7A5Q01650 507 aa8.57□□□□□ -1.04
CDKL5-211ENST00000637881 CUL1Q13616 776 aa8.57□□□□□ -1.04
CDKL5-211ENST00000637881 NFIXQ14938 502 aa8.57□□□□□ -1.04
CDKL5-211ENST00000637881 BCL2A1Q16548 175 aa8.57□□□□□ -1.04
CDKL5-211ENST00000637881 PTPN21Q16825 1174 aa8.57□□□□□ -1.04
CDKL5-211ENST00000637881 NLGN1Q8N2Q7 840 aa8.57□□□□□ -1.04
CDKL5-211ENST00000637881 AGGF1Q8N302 714 aaeCLIP8.57□□□□□ -1.04
CDKL5-211ENST00000637881 ARL10Q8N8L6 244 aa8.57□□□□□ -1.04
CDKL5-211ENST00000637881 TLCD1Q96CP7 247 aa8.57□□□□□ -1.04
CDKL5-211ENST00000637881 FAM89AQ96GI7 184 aa8.57□□□□□ -1.04
CDKL5-211ENST00000637881 ABHD8Q96I13 439 aa8.57□□□□□ -1.04
CDKL5-211ENST00000637881 ZNF333Q96JL9 665 aa8.57□□□□□ -1.04
CDKL5-211ENST00000637881 CLMNQ96JQ2 1002 aa8.57□□□□□ -1.04
CDKL5-211ENST00000637881 TUBGCP5Q96RT8 1024 aa8.57□□□□□ -1.04
CDKL5-211ENST00000637881 DNAJC7Q99615 494 aa8.57□□□□□ -1.04
CDKL5-211ENST00000637881 CGREF1Q99674 301 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms