RNA–Protein interactions for RNA: ENST00000636898.1

CHRNA7-221, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,057 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-221ENST00000636898 TMEM179Q6ZVK1 233 aa17.65■□□□□ 0.42
CHRNA7-221ENST00000636898 SND1Q7KZF4 910 aaKnown RBP eCLIP17.65■□□□□ 0.42
CHRNA7-221ENST00000636898 LENG9Q96B70 501 aa17.65■□□□□ 0.42
CHRNA7-221ENST00000636898 ZBTB9Q96C00 473 aa17.65■□□□□ 0.42
CHRNA7-221ENST00000636898 GMCL1Q96IK5 515 aa17.65■□□□□ 0.42
CHRNA7-221ENST00000636898 RBM12Q9NTZ6 932 aaKnown RBP17.65■□□□□ 0.42
CHRNA7-221ENST00000636898 ARMCX3Q9UH62 379 aaPredicted RBP17.65■□□□□ 0.42
CHRNA7-221ENST00000636898 HDAC9Q9UKV0 1011 aa17.65■□□□□ 0.42
CHRNA7-221ENST00000636898 SPATA31C1P0DKV0 1188 aa17.65■□□□□ 0.42
CHRNA7-221ENST00000636898 KLRC1P26715 233 aa17.65■□□□□ 0.42
CHRNA7-221ENST00000636898 CIITAP33076 1130 aa17.65■□□□□ 0.42
CHRNA7-221ENST00000636898 MATR3P43243 847 aaKnown RBP eCLIP17.65■□□□□ 0.42
CHRNA7-221ENST00000636898 MEI1Q5TIA1 1274 aa17.65■□□□□ 0.42
CHRNA7-221ENST00000636898 ALS2CLQ60I27 953 aa17.65■□□□□ 0.42
CHRNA7-221ENST00000636898 GPIHBP1Q8IV16 184 aa17.65■□□□□ 0.42
CHRNA7-221ENST00000636898 SH3GL2Q99962 352 aa17.65■□□□□ 0.42
CHRNA7-221ENST00000636898 TMX4Q9H1E5 349 aaPredicted RBP17.65■□□□□ 0.42
CHRNA7-221ENST00000636898 ATP8B3O60423 1300 aa17.64■□□□□ 0.41
CHRNA7-221ENST00000636898 SPDYE3A6NKU9 549 aa17.64■□□□□ 0.41
CHRNA7-221ENST00000636898 CES2O00748 559 aa17.64■□□□□ 0.41
CHRNA7-221ENST00000636898 CALUO43852 315 aaPredicted RBP17.64■□□□□ 0.41
CHRNA7-221ENST00000636898 ANXA13P27216 316 aa17.64■□□□□ 0.41
CHRNA7-221ENST00000636898 ICA1Q05084 483 aa17.64■□□□□ 0.41
CHRNA7-221ENST00000636898 SF3B2Q13435 895 aaKnown RBP17.64■□□□□ 0.41
CHRNA7-221ENST00000636898 KIAA0753Q2KHM9 967 aa17.64■□□□□ 0.41
CHRNA7-221ENST00000636898 DPY19L2P1Q6NXN4 242 aa17.64■□□□□ 0.41
CHRNA7-221ENST00000636898 SIAH1Q8IUQ4 282 aa17.64■□□□□ 0.41
CHRNA7-221ENST00000636898 TEX2Q8IWB9 1127 aa17.64■□□□□ 0.41
CHRNA7-221ENST00000636898 FAM133AQ8N9E0 248 aa17.64■□□□□ 0.41
CHRNA7-221ENST00000636898 RIN2Q8WYP3 895 aaPredicted RBP17.64■□□□□ 0.41
CHRNA7-221ENST00000636898 FBXL5Q9UKA1 691 aa17.64■□□□□ 0.41
CHRNA7-221ENST00000636898 RAD21O60216 631 aa17.63■□□□□ 0.41
CHRNA7-221ENST00000636898 SHOX2O60902 331 aaPredicted RBP17.63■□□□□ 0.41
CHRNA7-221ENST00000636898 AFPP02771 609 aaKnown RBP17.63■□□□□ 0.41
CHRNA7-221ENST00000636898 CASP5P51878 434 aa17.63■□□□□ 0.41
CHRNA7-221ENST00000636898 SLC7A5Q01650 507 aa17.63■□□□□ 0.41
CHRNA7-221ENST00000636898 LRRC31Q6UY01 552 aa17.63■□□□□ 0.41
CHRNA7-221ENST00000636898 FBXO11Q86XK2 927 aa17.63■□□□□ 0.41
CHRNA7-221ENST00000636898 IFT20Q8IY31 132 aa17.63■□□□□ 0.41
CHRNA7-221ENST00000636898 FAM76AQ8TAV0 307 aa17.63■□□□□ 0.41
CHRNA7-221ENST00000636898 P2RX7Q99572 595 aaKnown RBP17.63■□□□□ 0.41
CHRNA7-221ENST00000636898 REEP2Q9BRK0 252 aa17.63■□□□□ 0.41
CHRNA7-221ENST00000636898 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.63■□□□□ 0.41
CHRNA7-221ENST00000636898 ZHX3Q9H4I2 956 aa17.63■□□□□ 0.41
CHRNA7-221ENST00000636898 METTL14Q9HCE5 456 aaKnown RBP17.63■□□□□ 0.41
CHRNA7-221ENST00000636898 SMARCAL1Q9NZC9 954 aa17.63■□□□□ 0.41
CHRNA7-221ENST00000636898 EHD2Q9NZN4 543 aa17.63■□□□□ 0.41
CHRNA7-221ENST00000636898 ADAMTS1Q9UHI8 967 aa17.63■□□□□ 0.41
CHRNA7-221ENST00000636898 GOLGA6CA6NDK9 693 aa17.63■□□□□ 0.41
CHRNA7-221ENST00000636898 DDTLA6NHG4 134 aaPredicted RBP17.63■□□□□ 0.41
CHRNA7-221ENST00000636898 GOLGA8KD6RF30 607 aa17.63■□□□□ 0.41
CHRNA7-221ENST00000636898 F5H6K3 240 aa17.63■□□□□ 0.41
CHRNA7-221ENST00000636898 SLC16A3O15427 465 aaKnown RBP17.63■□□□□ 0.41
CHRNA7-221ENST00000636898 OPA1O60313 960 aa17.63■□□□□ 0.41
CHRNA7-221ENST00000636898 GOLGA6DP0CG33 693 aa17.63■□□□□ 0.41
CHRNA7-221ENST00000636898 SLURP2P0DP57 97 aa17.63■□□□□ 0.41
CHRNA7-221ENST00000636898 EPB41P11171 864 aaKnown RBP17.63■□□□□ 0.41
CHRNA7-221ENST00000636898 PSMC6P62333 389 aa17.63■□□□□ 0.41
CHRNA7-221ENST00000636898 IRX5P78411 483 aaPredicted RBP17.63■□□□□ 0.41
CHRNA7-221ENST00000636898 APBA1Q02410 837 aa17.63■□□□□ 0.41
CHRNA7-221ENST00000636898 KLRC3Q07444 240 aa17.63■□□□□ 0.41
CHRNA7-221ENST00000636898 IRF2BP2Q7Z5L9 587 aa17.63■□□□□ 0.41
CHRNA7-221ENST00000636898 NLGN1Q8N2Q7 840 aa17.63■□□□□ 0.41
CHRNA7-221ENST00000636898 POLR3CQ9BUI4 534 aaPredicted RBP17.63■□□□□ 0.41
CHRNA7-221ENST00000636898 TRIM34Q9BYJ4 488 aa17.63■□□□□ 0.41
CHRNA7-221ENST00000636898 GDF3Q9NR23 364 aa17.63■□□□□ 0.41
CHRNA7-221ENST00000636898 TYW1Q9NV66 732 aaKnown RBP17.63■□□□□ 0.41
CHRNA7-221ENST00000636898 GOLGA6AQ9NYA3 693 aa17.63■□□□□ 0.41
CHRNA7-221ENST00000636898 FAM198AQ9UFP1 575 aa17.63■□□□□ 0.41
CHRNA7-221ENST00000636898 FAM86B1E9PN63 330 aa17.62■□□□□ 0.41
CHRNA7-221ENST00000636898 FAM86B2P0C5J1 330 aa17.62■□□□□ 0.41
CHRNA7-221ENST00000636898 XRCC5P13010 732 aaKnown RBP17.62■□□□□ 0.41
CHRNA7-221ENST00000636898 UCHL3P15374 230 aa17.62■□□□□ 0.41
CHRNA7-221ENST00000636898 RPL13P26373 211 aaKnown RBP17.62■□□□□ 0.41
CHRNA7-221ENST00000636898 HOXD13P35453 343 aa17.62■□□□□ 0.41
CHRNA7-221ENST00000636898 PDE6BP35913 854 aa17.62■□□□□ 0.41
CHRNA7-221ENST00000636898 PRKCIP41743 596 aa17.62■□□□□ 0.41
CHRNA7-221ENST00000636898 PPFIA1Q13136 1202 aa17.62■□□□□ 0.41
CHRNA7-221ENST00000636898 PABPC4Q13310 644 aaKnown RBP eCLIP17.62■□□□□ 0.41
CHRNA7-221ENST00000636898 SFR1Q86XK3 245 aa17.62■□□□□ 0.41
CHRNA7-221ENST00000636898 MS4A14Q96JA4 679 aa17.62■□□□□ 0.41
CHRNA7-221ENST00000636898 INPP4AQ96PE3 977 aaPredicted RBP17.62■□□□□ 0.41
CHRNA7-221ENST00000636898 UIMC1Q96RL1 719 aa17.62■□□□□ 0.41
CHRNA7-221ENST00000636898 TRPC5Q9UL62 973 aaPredicted RBP17.62■□□□□ 0.41
CHRNA7-221ENST00000636898 CYP3A4P08684 503 aa17.62■□□□□ 0.41
CHRNA7-221ENST00000636898 ARID5AQ03989 594 aa17.62■□□□□ 0.41
CHRNA7-221ENST00000636898 TCP10Q12799 353 aa17.62■□□□□ 0.41
CHRNA7-221ENST00000636898 IFI16Q16666 785 aaKnown RBP17.62■□□□□ 0.41
CHRNA7-221ENST00000636898 EXOC3L4Q17RC7 722 aa17.62■□□□□ 0.41
CHRNA7-221ENST00000636898 STRIP1Q5VSL9 837 aa17.62■□□□□ 0.41
CHRNA7-221ENST00000636898 SYDE2Q5VT97 1194 aa17.62■□□□□ 0.41
CHRNA7-221ENST00000636898 SRLQ86TD4 932 aa17.62■□□□□ 0.41
CHRNA7-221ENST00000636898 VAV3Q9UKW4 847 aa17.62■□□□□ 0.41
CHRNA7-221ENST00000636898 SYNPO2Q9UMS6 1093 aa17.62■□□□□ 0.41
CHRNA7-221ENST00000636898 PON1P27169 355 aa17.61■□□□□ 0.41
CHRNA7-221ENST00000636898 PTK2Q05397 1052 aa17.61■□□□□ 0.41
CHRNA7-221ENST00000636898 MEX3CQ5U5Q3 659 aaKnown RBP17.61■□□□□ 0.41
CHRNA7-221ENST00000636898 BTNL9Q6UXG8 535 aa17.61■□□□□ 0.41
CHRNA7-221ENST00000636898 GBP6Q6ZN66 633 aa17.61■□□□□ 0.41
CHRNA7-221ENST00000636898 SH3BP5LQ7L8J4 393 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms