RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 TSGA10IPQ3SY00 556 aa14.4□□□□□ -0.1
CTSD-208ENST00000636843 TIGD5Q53EQ6 642 aa14.4□□□□□ -0.1
CTSD-208ENST00000636843 RSPH3Q86UC2 560 aa14.4□□□□□ -0.1
CTSD-208ENST00000636843 TMEM192Q8IY95 271 aa14.4□□□□□ -0.1
CTSD-208ENST00000636843 LIMCH1Q9UPQ0 1083 aa14.4□□□□□ -0.1
CTSD-208ENST00000636843 UBIAD1Q9Y5Z9 338 aa14.4□□□□□ -0.1
CTSD-208ENST00000636843 RBAK-RBAKDNI3L0D1 243 aa14.39□□□□□ -0.11
CTSD-208ENST00000636843 SLC27A2O14975 620 aa14.39□□□□□ -0.11
CTSD-208ENST00000636843 ATP9AO75110 1047 aa14.39□□□□□ -0.11
CTSD-208ENST00000636843 CHRNA1P02708 482 aa14.39□□□□□ -0.11
CTSD-208ENST00000636843 RPLP2P05387 115 aaKnown RBP14.39□□□□□ -0.11
CTSD-208ENST00000636843 PPFIA1Q13136 1202 aa14.39□□□□□ -0.11
CTSD-208ENST00000636843 ZSCAN31Q96LW9 406 aaPredicted RBP14.39□□□□□ -0.11
CTSD-208ENST00000636843 JAKMIP1Q96N16 626 aaKnown RBP14.39□□□□□ -0.11
CTSD-208ENST00000636843 SMARCAD1Q9H4L7 1026 aa14.39□□□□□ -0.11
CTSD-208ENST00000636843 EPHX3Q9H6B9 360 aa14.39□□□□□ -0.11
CTSD-208ENST00000636843 EHMT1Q9H9B1 1298 aa14.39□□□□□ -0.11
CTSD-208ENST00000636843 ERAP1Q9NZ08 941 aa14.39□□□□□ -0.11
CTSD-208ENST00000636843 SLC12A7Q9Y666 1083 aa14.39□□□□□ -0.11
CTSD-208ENST00000636843 GSTTP1A0A1W2PQM5 241 aa14.38□□□□□ -0.11
CTSD-208ENST00000636843 SPDYE3A6NKU9 549 aa14.38□□□□□ -0.11
CTSD-208ENST00000636843 BAG4O95429 457 aaKnown RBP14.38□□□□□ -0.11
CTSD-208ENST00000636843 ITGB5P18084 799 aa14.38□□□□□ -0.11
CTSD-208ENST00000636843 KCNA5P22460 613 aa14.38□□□□□ -0.11
CTSD-208ENST00000636843 AK2P54819 239 aa14.38□□□□□ -0.11
CTSD-208ENST00000636843 GPM6BQ13491 265 aa14.38□□□□□ -0.11
CTSD-208ENST00000636843 MTMR1Q13613 665 aa14.38□□□□□ -0.11
CTSD-208ENST00000636843 KRT32Q14532 448 aa14.38□□□□□ -0.11
CTSD-208ENST00000636843 PUS10Q3MIT2 529 aaKnown RBP14.38□□□□□ -0.11
CTSD-208ENST00000636843 RUFY3Q7L099 469 aa14.38□□□□□ -0.11
CTSD-208ENST00000636843 CMTR1Q8N1G2 835 aaKnown RBP14.38□□□□□ -0.11
CTSD-208ENST00000636843 GLG1Q92896 1179 aa14.38□□□□□ -0.11
CTSD-208ENST00000636843 PDRG1Q9NUG6 133 aa14.38□□□□□ -0.11
CTSD-208ENST00000636843 TUBE1Q9UJT0 475 aa14.38□□□□□ -0.11
CTSD-208ENST00000636843 COL4A6Q14031 1691 aa14.38□□□□□ -0.11
CTSD-208ENST00000636843 MBLAC1A4D2B0 266 aaPredicted RBP14.37□□□□□ -0.11
CTSD-208ENST00000636843 GHRP10912 638 aa14.37□□□□□ -0.11
CTSD-208ENST00000636843 RXRAP19793 462 aa14.37□□□□□ -0.11
CTSD-208ENST00000636843 MGAT3Q09327 533 aa14.37□□□□□ -0.11
CTSD-208ENST00000636843 GRIK4Q16099 956 aa14.37□□□□□ -0.11
CTSD-208ENST00000636843 UBE2SQ16763 222 aa14.37□□□□□ -0.11
CTSD-208ENST00000636843 TMEM31Q5JXX7 168 aa14.37□□□□□ -0.11
CTSD-208ENST00000636843 RUFY4Q6ZNE9 571 aa14.37□□□□□ -0.11
CTSD-208ENST00000636843 TMTC3Q6ZXV5 915 aa14.37□□□□□ -0.11
CTSD-208ENST00000636843 TEX2Q8IWB9 1127 aa14.37□□□□□ -0.11
CTSD-208ENST00000636843 FAM178BQ8IXR5 827 aa14.37□□□□□ -0.11
CTSD-208ENST00000636843 FIBCD1Q8N539 461 aa14.37□□□□□ -0.11
CTSD-208ENST00000636843 FANCBQ8NB91 859 aa14.37□□□□□ -0.11
CTSD-208ENST00000636843 BANK1Q8NDB2 785 aa14.37□□□□□ -0.11
CTSD-208ENST00000636843 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.37□□□□□ -0.11
CTSD-208ENST00000636843 LRFN3Q9BTN0 628 aa14.37□□□□□ -0.11
CTSD-208ENST00000636843 JADE2Q9NQC1 790 aa14.37□□□□□ -0.11
CTSD-208ENST00000636843 SH2B1Q9NRF2 756 aaPredicted RBP14.37□□□□□ -0.11
CTSD-208ENST00000636843 PCDHA6Q9UN73 950 aa14.37□□□□□ -0.11
CTSD-208ENST00000636843 RWDD3Q9Y3V2 267 aa14.37□□□□□ -0.11
CTSD-208ENST00000636843 PCDHA8Q9Y5H6 950 aa14.37□□□□□ -0.11
CTSD-208ENST00000636843 RRN3P2A6NIE6 340 aa14.36□□□□□ -0.11
CTSD-208ENST00000636843 RB1P06400 928 aa14.36□□□□□ -0.11
CTSD-208ENST00000636843 MARK3P27448 753 aa14.36□□□□□ -0.11
CTSD-208ENST00000636843 PLA2G5P39877 138 aa14.36□□□□□ -0.11
CTSD-208ENST00000636843 LPIN1Q14693 890 aa14.36□□□□□ -0.11
CTSD-208ENST00000636843 ANKRD1Q15327 319 aa14.36□□□□□ -0.11
CTSD-208ENST00000636843 SYNE3Q6ZMZ3 975 aa14.36□□□□□ -0.11
CTSD-208ENST00000636843 SGMS1Q86VZ5 419 aa14.36□□□□□ -0.11
CTSD-208ENST00000636843 CCDC82Q8N4S0 544 aa14.36□□□□□ -0.11
CTSD-208ENST00000636843 ARIH1Q9Y4X5 557 aaPredicted RBP14.36□□□□□ -0.11
CTSD-208ENST00000636843 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.36□□□□□ -0.11
CTSD-208ENST00000636843 KAT6AQ92794 2004 aa14.36□□□□□ -0.11
CTSD-208ENST00000636843 hCG_1642624A0A1W2PR95 340 aa14.36□□□□□ -0.11
CTSD-208ENST00000636843 GRXCR2A6NFK2 248 aa14.36□□□□□ -0.11
CTSD-208ENST00000636843 C5orf67F2Z3F1 127 aa14.36□□□□□ -0.11
CTSD-208ENST00000636843 PI4K2BG5E9Z4 385 aa14.36□□□□□ -0.11
CTSD-208ENST00000636843 ENPP3O14638 875 aa14.36□□□□□ -0.11
CTSD-208ENST00000636843 GPR37L1O60883 481 aa14.36□□□□□ -0.11
CTSD-208ENST00000636843 COL19A1Q14993 1142 aa14.36□□□□□ -0.11
CTSD-208ENST00000636843 ADCK5Q3MIX3 580 aa14.36□□□□□ -0.11
CTSD-208ENST00000636843 TCEAL5Q5H9L2 206 aa14.36□□□□□ -0.11
CTSD-208ENST00000636843 FBXO47Q5MNV8 452 aa14.36□□□□□ -0.11
CTSD-208ENST00000636843 PTCRAQ6ISU1 281 aaPredicted RBP14.36□□□□□ -0.11
CTSD-208ENST00000636843 HEATR3Q7Z4Q2 680 aa14.36□□□□□ -0.11
CTSD-208ENST00000636843 NEK9Q8TD19 979 aa14.36□□□□□ -0.11
CTSD-208ENST00000636843 DNAJB3Q8WWF6 145 aa14.36□□□□□ -0.11
CTSD-208ENST00000636843 PABPC5Q96DU9 382 aaKnown RBP14.36□□□□□ -0.11
CTSD-208ENST00000636843 FAM122AQ96E09 287 aa14.36□□□□□ -0.11
CTSD-208ENST00000636843 NSUN3Q9H649 340 aaKnown RBP14.36□□□□□ -0.11
CTSD-208ENST00000636843 DOCK5Q9H7D0 1870 aa14.36□□□□□ -0.11
CTSD-208ENST00000636843 NCK2O43639 380 aa14.35□□□□□ -0.11
CTSD-208ENST00000636843 BRD1O95696 1058 aa14.35□□□□□ -0.11
CTSD-208ENST00000636843 CTNNB1P35222 781 aa14.35□□□□□ -0.11
CTSD-208ENST00000636843 BMPR1AP36894 532 aa14.35□□□□□ -0.11
CTSD-208ENST00000636843 COL9A3Q14050 684 aaPredicted RBP14.35□□□□□ -0.11
CTSD-208ENST00000636843 MARCH8Q5T0T0 291 aa14.35□□□□□ -0.11
CTSD-208ENST00000636843 BLOC1S2Q6QNY1 142 aa14.35□□□□□ -0.11
CTSD-208ENST00000636843 TSHZ1Q6ZSZ6 1077 aa14.35□□□□□ -0.11
CTSD-208ENST00000636843 MICU3Q86XE3 530 aa14.35□□□□□ -0.11
CTSD-208ENST00000636843 RAB11FIP4Q86YS3 637 aa14.35□□□□□ -0.11
CTSD-208ENST00000636843 GJD3Q8N144 294 aa14.35□□□□□ -0.11
CTSD-208ENST00000636843 MXRA8Q9BRK3 442 aa14.35□□□□□ -0.11
CTSD-208ENST00000636843 C11orf84Q9BUA3 381 aaPredicted RBP14.35□□□□□ -0.11
CTSD-208ENST00000636843 LRRC2Q9BYS8 371 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms