RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 PSMD2Q13200 908 aa20.83■□□□□ 0.93
CLN5-216ENST00000636780 CPXCR1Q8N123 301 aa20.83■□□□□ 0.93
CLN5-216ENST00000636780 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.83■□□□□ 0.93
CLN5-216ENST00000636780 AJAP1Q9UKB5 411 aaPredicted RBP20.83■□□□□ 0.93
CLN5-216ENST00000636780 COL4A5P29400 1685 aa20.83■□□□□ 0.93
CLN5-216ENST00000636780 GREB1LQ9C091 1923 aaPredicted RBP20.83■□□□□ 0.93
CLN5-216ENST00000636780 DPEP1P16444 411 aa20.83■□□□□ 0.92
CLN5-216ENST00000636780 RXRBP28702 533 aa20.83■□□□□ 0.92
CLN5-216ENST00000636780 PDXDC1Q6P996 788 aa20.83■□□□□ 0.92
CLN5-216ENST00000636780 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.83■□□□□ 0.92
CLN5-216ENST00000636780 PPP1R1BQ9UD71 204 aaPredicted RBP20.83■□□□□ 0.92
CLN5-216ENST00000636780 ADAMTS1Q9UHI8 967 aa20.83■□□□□ 0.92
CLN5-216ENST00000636780 ZBTB21Q9ULJ3 1066 aa20.83■□□□□ 0.92
CLN5-216ENST00000636780 KDM3AQ9Y4C1 1321 aa20.83■□□□□ 0.92
CLN5-216ENST00000636780 IGLV3-22A0A075B6J6 115 aa20.82■□□□□ 0.92
CLN5-216ENST00000636780 AKAP3O75969 853 aa20.82■□□□□ 0.92
CLN5-216ENST00000636780 RPA1P27694 616 aa20.82■□□□□ 0.92
CLN5-216ENST00000636780 HDLBPQ00341 1268 aaKnown RBP20.82■□□□□ 0.92
CLN5-216ENST00000636780 SLC7A5Q01650 507 aa20.82■□□□□ 0.92
CLN5-216ENST00000636780 RSBN1LQ6PCB5 846 aaPredicted RBP20.82■□□□□ 0.92
CLN5-216ENST00000636780 SLFN12Q8IYM2 578 aa20.82■□□□□ 0.92
CLN5-216ENST00000636780 MBOAT7Q96N66 472 aa20.82■□□□□ 0.92
CLN5-216ENST00000636780 MRIQ9BWK5 157 aa20.82■□□□□ 0.92
CLN5-216ENST00000636780 CNTNAP1P78357 1384 aa20.82■□□□□ 0.92
CLN5-216ENST00000636780 TMEM150BA6NC51 233 aa20.82■□□□□ 0.92
CLN5-216ENST00000636780 WHAMMP3Q1A5X7 153 aa20.82■□□□□ 0.92
CLN5-216ENST00000636780 TRIM59Q8IWR1 403 aa20.82■□□□□ 0.92
CLN5-216ENST00000636780 CCDC170Q8IYT3 715 aa20.82■□□□□ 0.92
CLN5-216ENST00000636780 RDH13Q8NBN7 331 aa20.82■□□□□ 0.92
CLN5-216ENST00000636780 ASTN2O75129 1339 aaPredicted RBP20.82■□□□□ 0.92
CLN5-216ENST00000636780 A0A1W2PQJ5 194 aa20.81■□□□□ 0.92
CLN5-216ENST00000636780 INPP5BP32019 993 aa20.81■□□□□ 0.92
CLN5-216ENST00000636780 AP3B2Q13367 1082 aa20.81■□□□□ 0.92
CLN5-216ENST00000636780 BANK1Q8NDB2 785 aa20.81■□□□□ 0.92
CLN5-216ENST00000636780 ENTPD3O75355 529 aa20.81■□□□□ 0.92
CLN5-216ENST00000636780 SLITRK3O94933 977 aa20.81■□□□□ 0.92
CLN5-216ENST00000636780 SYT2Q8N9I0 419 aaPredicted RBP20.81■□□□□ 0.92
CLN5-216ENST00000636780 ABCB11O95342 1321 aa20.81■□□□□ 0.92
CLN5-216ENST00000636780 A0A087X0T9 212 aa20.81■□□□□ 0.92
CLN5-216ENST00000636780 LRRIQ3A6PVS8 624 aaPredicted RBP20.81■□□□□ 0.92
CLN5-216ENST00000636780 FAM228BP0C875 321 aa20.81■□□□□ 0.92
CLN5-216ENST00000636780 PPP1R2P41236 205 aa20.81■□□□□ 0.92
CLN5-216ENST00000636780 PRAMEF18Q5VWM3 479 aa20.81■□□□□ 0.92
CLN5-216ENST00000636780 OGFOD1Q8N543 542 aa20.81■□□□□ 0.92
CLN5-216ENST00000636780 PROCA1Q8NCQ7 364 aaPredicted RBP20.81■□□□□ 0.92
CLN5-216ENST00000636780 MYO1AQ9UBC5 1043 aa20.81■□□□□ 0.92
CLN5-216ENST00000636780 CCDC151A5D8V7 595 aa20.8■□□□□ 0.92
CLN5-216ENST00000636780 FTCDO95954 541 aa20.8■□□□□ 0.92
CLN5-216ENST00000636780 EPS15P42566 896 aa20.8■□□□□ 0.92
CLN5-216ENST00000636780 Q4G0T1 1027 aa20.8■□□□□ 0.92
CLN5-216ENST00000636780 FIGNQ5HY92 759 aa20.8■□□□□ 0.92
CLN5-216ENST00000636780 LRCH2Q5VUJ6 765 aa20.8■□□□□ 0.92
CLN5-216ENST00000636780 LRRC27Q9C0I9 530 aa20.8■□□□□ 0.92
CLN5-216ENST00000636780 SH2D4AQ9H788 454 aa20.8■□□□□ 0.92
CLN5-216ENST00000636780 TMOD2Q9NZR1 351 aa20.8■□□□□ 0.92
CLN5-216ENST00000636780 HDAC9Q9UKV0 1011 aa20.8■□□□□ 0.92
CLN5-216ENST00000636780 RABGAP1Q9Y3P9 1069 aa20.8■□□□□ 0.92
CLN5-216ENST00000636780 TISP43B9A030 160 aa20.8■□□□□ 0.92
CLN5-216ENST00000636780 FGFR1OPO95684 399 aaKnown RBP20.8■□□□□ 0.92
CLN5-216ENST00000636780 PAPD7Q5XG87 772 aaKnown RBP20.8■□□□□ 0.92
CLN5-216ENST00000636780 HAUS3Q68CZ6 603 aa20.8■□□□□ 0.92
CLN5-216ENST00000636780 RINT1Q6NUQ1 792 aa20.8■□□□□ 0.92
CLN5-216ENST00000636780 OTOP1Q7RTM1 612 aa20.8■□□□□ 0.92
CLN5-216ENST00000636780 MSANTD4Q8NCY6 345 aa20.8■□□□□ 0.92
CLN5-216ENST00000636780 IL31RAQ8NI17 732 aa20.8■□□□□ 0.92
CLN5-216ENST00000636780 LRRN2O75325 713 aa20.79■□□□□ 0.92
CLN5-216ENST00000636780 MYCT1Q8N699 235 aa20.79■□□□□ 0.92
CLN5-216ENST00000636780 RIN2Q8WYP3 895 aaPredicted RBP20.79■□□□□ 0.92
CLN5-216ENST00000636780 GTPBP4Q9BZE4 634 aaKnown RBP20.79■□□□□ 0.92
CLN5-216ENST00000636780 COL20A1Q9P218 1284 aa20.79■□□□□ 0.92
CLN5-216ENST00000636780 TMX2Q9Y320 296 aa20.79■□□□□ 0.92
CLN5-216ENST00000636780 NFIBO00712 420 aa20.79■□□□□ 0.92
CLN5-216ENST00000636780 KCNA3P22001 575 aa20.79■□□□□ 0.92
CLN5-216ENST00000636780 SEMA3FQ13275 785 aa20.79■□□□□ 0.92
CLN5-216ENST00000636780 KNOP1Q1ED39 458 aaKnown RBP20.79■□□□□ 0.92
CLN5-216ENST00000636780 ASTE1Q2TB18 679 aaPredicted RBP20.79■□□□□ 0.92
CLN5-216ENST00000636780 TTLL6Q8N841 843 aa20.79■□□□□ 0.92
CLN5-216ENST00000636780 L1RE1Q9UN81 338 aa20.79■□□□□ 0.92
CLN5-216ENST00000636780 CETN3O15182 167 aa20.78■□□□□ 0.92
CLN5-216ENST00000636780 SFMBT2Q5VUG0 894 aa20.78■□□□□ 0.92
CLN5-216ENST00000636780 ARHGEF10LQ9HCE6 1279 aa20.78■□□□□ 0.92
CLN5-216ENST00000636780 ATRNL1Q5VV63 1379 aa20.78■□□□□ 0.92
CLN5-216ENST00000636780 KLRC1P26715 233 aa20.78■□□□□ 0.92
CLN5-216ENST00000636780 HNRNPH3P31942 346 aaKnown RBP20.78■□□□□ 0.92
CLN5-216ENST00000636780 LDHDQ86WU2 507 aa20.78■□□□□ 0.92
CLN5-216ENST00000636780 CREG2Q8IUH2 290 aa20.78■□□□□ 0.92
CLN5-216ENST00000636780 RAB21Q9UL25 225 aa20.78■□□□□ 0.92
CLN5-216ENST00000636780 ASTN1O14525 1302 aa20.77■□□□□ 0.92
CLN5-216ENST00000636780 BTNL9Q6UXG8 535 aa20.77■□□□□ 0.92
CLN5-216ENST00000636780 ERMNQ8TAM6 284 aa20.77■□□□□ 0.92
CLN5-216ENST00000636780 ELMO3Q96BJ8 720 aa20.77■□□□□ 0.92
CLN5-216ENST00000636780 UNC45AQ9H3U1 944 aa20.77■□□□□ 0.92
CLN5-216ENST00000636780 FRMD3A2A2Y4 597 aa20.77■□□□□ 0.92
CLN5-216ENST00000636780 GCOM1H8Y6P7 765 aaPredicted RBP20.77■□□□□ 0.92
CLN5-216ENST00000636780 SORBS3O60504 671 aa20.77■□□□□ 0.92
CLN5-216ENST00000636780 POLR2MP0CAP2 368 aa20.77■□□□□ 0.92
CLN5-216ENST00000636780 FKBP1AP62942 108 aaKnown RBP20.77■□□□□ 0.92
CLN5-216ENST00000636780 GABPB1Q06547 395 aaPredicted RBP20.77■□□□□ 0.92
CLN5-216ENST00000636780 ZNF772Q68DY9 489 aaPredicted RBP20.77■□□□□ 0.92
CLN5-216ENST00000636780 POTEAQ6S8J7 498 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms