RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 CEP55Q53EZ4 464 aa20.95■□□□□ 0.94
CLN6-214ENST00000636314 MCTP2Q6DN12 878 aa20.95■□□□□ 0.94
CLN6-214ENST00000636314 FAM117BQ6P1L5 589 aa20.95■□□□□ 0.94
CLN6-214ENST00000636314 ATP6V0A1Q93050 837 aa20.95■□□□□ 0.94
CLN6-214ENST00000636314 ZNF274Q96GC6 653 aaPredicted RBP20.95■□□□□ 0.94
CLN6-214ENST00000636314 LARP6Q9BRS8 491 aaKnown RBP20.95■□□□□ 0.94
CLN6-214ENST00000636314 JPH1Q9HDC5 661 aaPredicted RBP20.95■□□□□ 0.94
CLN6-214ENST00000636314 KCNH7Q9NS40 1196 aa20.95■□□□□ 0.94
CLN6-214ENST00000636314 HCN4Q9Y3Q4 1203 aa20.95■□□□□ 0.94
CLN6-214ENST00000636314 BRWD1Q9NSI6 2320 aa20.94■□□□□ 0.94
CLN6-214ENST00000636314 KAT6AQ92794 2004 aa20.94■□□□□ 0.94
CLN6-214ENST00000636314 EIF5BO60841 1220 aaKnown RBP20.94■□□□□ 0.94
CLN6-214ENST00000636314 CXCL10P02778 98 aa20.94■□□□□ 0.94
CLN6-214ENST00000636314 ANAPC15P60006 121 aa20.94■□□□□ 0.94
CLN6-214ENST00000636314 STK3Q13188 491 aa20.94■□□□□ 0.94
CLN6-214ENST00000636314 TCTN1Q2MV58 587 aa20.94■□□□□ 0.94
CLN6-214ENST00000636314 CPLX2Q6PUV4 134 aaKnown RBP20.94■□□□□ 0.94
CLN6-214ENST00000636314 CYP2W1Q8TAV3 490 aa20.94■□□□□ 0.94
CLN6-214ENST00000636314 BICD2Q8TD16 824 aa20.94■□□□□ 0.94
CLN6-214ENST00000636314 SEPT1Q8WYJ6 367 aa20.94■□□□□ 0.94
CLN6-214ENST00000636314 WNT8BQ93098 351 aa20.94■□□□□ 0.94
CLN6-214ENST00000636314 RAD9AQ99638 391 aa20.94■□□□□ 0.94
CLN6-214ENST00000636314 SDF4Q9BRK5 362 aa20.94■□□□□ 0.94
CLN6-214ENST00000636314 LMCD1Q9NZU5 365 aa20.94■□□□□ 0.94
CLN6-214ENST00000636314 VPS54Q9P1Q0 977 aa20.94■□□□□ 0.94
CLN6-214ENST00000636314 ABHD14A-ACY1A0A1B0GW23 586 aa20.93■□□□□ 0.94
CLN6-214ENST00000636314 GJB5O95377 273 aa20.93■□□□□ 0.94
CLN6-214ENST00000636314 GNAT1P11488 350 aa20.93■□□□□ 0.94
CLN6-214ENST00000636314 HOXC8P31273 242 aa20.93■□□□□ 0.94
CLN6-214ENST00000636314 SSRP1Q08945 709 aaKnown RBP20.93■□□□□ 0.94
CLN6-214ENST00000636314 IKBKEQ14164 716 aa20.93■□□□□ 0.94
CLN6-214ENST00000636314 TRIM71Q2Q1W2 868 aaKnown RBP20.93■□□□□ 0.94
CLN6-214ENST00000636314 TMEM31Q5JXX7 168 aa20.93■□□□□ 0.94
CLN6-214ENST00000636314 SERINC5Q86VE9 423 aa20.93■□□□□ 0.94
CLN6-214ENST00000636314 TGS1Q96RS0 853 aaKnown RBP20.93■□□□□ 0.94
CLN6-214ENST00000636314 RNPEPQ9H4A4 650 aa20.93■□□□□ 0.94
CLN6-214ENST00000636314 SLC9A2Q9UBY0 812 aa20.93■□□□□ 0.94
CLN6-214ENST00000636314 GSTTP1A0A1W2PQM5 241 aa20.92■□□□□ 0.94
CLN6-214ENST00000636314 RBAK-RBAKDNI3L0D1 243 aa20.92■□□□□ 0.94
CLN6-214ENST00000636314 EFCAB14O75071 495 aa20.92■□□□□ 0.94
CLN6-214ENST00000636314 ARP10275 920 aa20.92■□□□□ 0.94
CLN6-214ENST00000636314 GLG1Q92896 1179 aa20.92■□□□□ 0.94
CLN6-214ENST00000636314 SUGCTQ9HAC7 445 aa20.92■□□□□ 0.94
CLN6-214ENST00000636314 AGO4Q9HCK5 861 aaKnown RBP20.92■□□□□ 0.94
CLN6-214ENST00000636314 SETD4Q9NVD3 440 aa20.92■□□□□ 0.94
CLN6-214ENST00000636314 ERAP1Q9NZ08 941 aa20.92■□□□□ 0.94
CLN6-214ENST00000636314 NFASCO94856 1347 aa20.92■□□□□ 0.94
CLN6-214ENST00000636314 LINC01553A4QN01 128 aa20.91■□□□□ 0.94
CLN6-214ENST00000636314 MEIS1O00470 390 aa20.91■□□□□ 0.94
CLN6-214ENST00000636314 ADAMTS3O15072 1205 aa20.91■□□□□ 0.94
CLN6-214ENST00000636314 TREHO43280 583 aa20.91■□□□□ 0.94
CLN6-214ENST00000636314 DEXIO95424 95 aa20.91■□□□□ 0.94
CLN6-214ENST00000636314 MARK3P27448 753 aa20.91■□□□□ 0.94
CLN6-214ENST00000636314 THPOP40225 353 aa20.91■□□□□ 0.94
CLN6-214ENST00000636314 ERVK-21P61565 698 aa20.91■□□□□ 0.94
CLN6-214ENST00000636314 ZNF618Q5T7W0 954 aa20.91■□□□□ 0.94
CLN6-214ENST00000636314 NIPA1Q7RTP0 329 aa20.91■□□□□ 0.94
CLN6-214ENST00000636314 EMSYQ7Z589 1322 aa20.91■□□□□ 0.94
CLN6-214ENST00000636314 RASGRP4Q8TDF6 673 aa20.91■□□□□ 0.94
CLN6-214ENST00000636314 KHSRPQ92945 711 aaKnown RBP eCLIP20.91■□□□□ 0.948e-8■□□□□ 8.3
CLN6-214ENST00000636314 SH3GLB2Q9NR46 395 aa20.91■□□□□ 0.94
CLN6-214ENST00000636314 NLRC5Q86WI3 1866 aa20.9■□□□□ 0.94
CLN6-214ENST00000636314 FAM86C2PA6NEL3 165 aa20.9■□□□□ 0.94
CLN6-214ENST00000636314 FAM86B1E9PN63 330 aa20.9■□□□□ 0.94
CLN6-214ENST00000636314 CYP3A4P08684 503 aa20.9■□□□□ 0.94
CLN6-214ENST00000636314 FAM86B2P0C5J1 330 aa20.9■□□□□ 0.94
CLN6-214ENST00000636314 NLRP5P59047 1200 aa20.9■□□□□ 0.94
CLN6-214ENST00000636314 ITGB3BPQ13352 177 aaPredicted RBP20.9■□□□□ 0.94
CLN6-214ENST00000636314 PLA2G4DQ86XP0 818 aa20.9■□□□□ 0.94
CLN6-214ENST00000636314 LMBR1Q8WVP7 490 aa20.9■□□□□ 0.94
CLN6-214ENST00000636314 CRYGNQ8WXF5 182 aa20.9■□□□□ 0.94
CLN6-214ENST00000636314 SMARCAD1Q9H4L7 1026 aa20.9■□□□□ 0.94
CLN6-214ENST00000636314 AZI2Q9H6S1 392 aa20.9■□□□□ 0.94
CLN6-214ENST00000636314 UBE2ZQ9H832 354 aaPredicted RBP20.9■□□□□ 0.94
CLN6-214ENST00000636314 NRCAMQ92823 1304 aa20.89■□□□□ 0.93
CLN6-214ENST00000636314 CDKL5O76039 1030 aa20.89■□□□□ 0.93
CLN6-214ENST00000636314 ACTR2P61160 394 aa20.89■□□□□ 0.93
CLN6-214ENST00000636314 SETQ01105 290 aaPredicted RBP20.89■□□□□ 0.93
CLN6-214ENST00000636314 PPFIA1Q13136 1202 aa20.89■□□□□ 0.93
CLN6-214ENST00000636314 ANKRD1Q15327 319 aa20.89■□□□□ 0.93
CLN6-214ENST00000636314 TRAF7Q6Q0C0 670 aa20.89■□□□□ 0.93
CLN6-214ENST00000636314 SLKQ9H2G2 1235 aaPredicted RBP20.89■□□□□ 0.93
CLN6-214ENST00000636314 RSPH10B2B2RC85 870 aa20.88■□□□□ 0.93
CLN6-214ENST00000636314 DDX39AO00148 427 aaKnown RBP20.88■□□□□ 0.93
CLN6-214ENST00000636314 CAND2O75155 1236 aa20.88■□□□□ 0.93
CLN6-214ENST00000636314 LGR5O75473 907 aa20.88■□□□□ 0.93
CLN6-214ENST00000636314 RSPH10BP0C881 870 aa20.88■□□□□ 0.93
CLN6-214ENST00000636314 SCRN1Q12765 414 aa20.88■□□□□ 0.93
CLN6-214ENST00000636314 MBTPS1Q14703 1052 aa20.88■□□□□ 0.93
CLN6-214ENST00000636314 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.88■□□□□ 0.93
CLN6-214ENST00000636314 FBXO22Q8NEZ5 403 aa20.88■□□□□ 0.93
CLN6-214ENST00000636314 IGLV3-22A0A075B6J6 115 aa20.87■□□□□ 0.93
CLN6-214ENST00000636314 AMHP03971 560 aa20.87■□□□□ 0.93
CLN6-214ENST00000636314 CTSHP09668 335 aa20.87■□□□□ 0.93
CLN6-214ENST00000636314 HOXD11P31277 338 aaPredicted RBP20.87■□□□□ 0.93
CLN6-214ENST00000636314 ADAM17P78536 824 aa20.87■□□□□ 0.93
CLN6-214ENST00000636314 GRIK4Q16099 956 aa20.87■□□□□ 0.93
CLN6-214ENST00000636314 MYOCDQ8IZQ8 938 aa20.87■□□□□ 0.93
CLN6-214ENST00000636314 C17orf80Q9BSJ5 609 aa20.87■□□□□ 0.93
CLN6-214ENST00000636314 CD320Q9NPF0 282 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms