RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 LTBP2Q14767 1821 aa17.46■□□□□ 0.39
CLN6-211ENST00000635754 H0YGN5 161 aa17.46■□□□□ 0.39
CLN6-211ENST00000635754 SMIM10L2AP0DMW4 78 aa17.46■□□□□ 0.39
CLN6-211ENST00000635754 SMIM10L2BP0DMW5 78 aa17.46■□□□□ 0.39
CLN6-211ENST00000635754 MARK3P27448 753 aa17.46■□□□□ 0.39
CLN6-211ENST00000635754 BECN1Q14457 450 aa17.46■□□□□ 0.39
CLN6-211ENST00000635754 ZNF174Q15697 407 aa17.46■□□□□ 0.39
CLN6-211ENST00000635754 PTGISQ16647 500 aa17.46■□□□□ 0.39
CLN6-211ENST00000635754 RILPL1Q5EBL4 403 aa17.46■□□□□ 0.39
CLN6-211ENST00000635754 MIER3Q7Z3K6 550 aa17.46■□□□□ 0.39
CLN6-211ENST00000635754 BRAPQ7Z569 592 aa17.46■□□□□ 0.39
CLN6-211ENST00000635754 CCDC60Q8IWA6 550 aaPredicted RBP17.46■□□□□ 0.39
CLN6-211ENST00000635754 RDM1Q8NG50 284 aa17.46■□□□□ 0.39
CLN6-211ENST00000635754 AFAP1L1Q8TED9 768 aa17.46■□□□□ 0.39
CLN6-211ENST00000635754 TRMT13Q9NUP7 481 aaKnown RBP17.46■□□□□ 0.39
CLN6-211ENST00000635754 PPP2R5CQ13362 524 aa17.45■□□□□ 0.38
CLN6-211ENST00000635754 GDF6Q6KF10 455 aaPredicted RBP17.45■□□□□ 0.38
CLN6-211ENST00000635754 SWSAP1Q6NVH7 229 aa17.45■□□□□ 0.38
CLN6-211ENST00000635754 PDXDC2PQ6P474 469 aa17.45■□□□□ 0.38
CLN6-211ENST00000635754 B3GNT9Q6UX72 402 aa17.45■□□□□ 0.38
CLN6-211ENST00000635754 SH3RF1Q7Z6J0 888 aa17.45■□□□□ 0.38
CLN6-211ENST00000635754 TNPO1Q92973 898 aaKnown RBP17.45■□□□□ 0.38
CLN6-211ENST00000635754 RNPEPQ9H4A4 650 aa17.45■□□□□ 0.38
CLN6-211ENST00000635754 VAV3Q9UKW4 847 aa17.45■□□□□ 0.38
CLN6-211ENST00000635754 TBX21Q9UL17 535 aa17.45■□□□□ 0.38
CLN6-211ENST00000635754 TRPC6Q9Y210 931 aa17.45■□□□□ 0.38
CLN6-211ENST00000635754 C17orf102A2RUQ5 167 aa17.44■□□□□ 0.38
CLN6-211ENST00000635754 KIAA0355O15063 1070 aa17.44■□□□□ 0.38
CLN6-211ENST00000635754 STX6O43752 255 aa17.44■□□□□ 0.38
CLN6-211ENST00000635754 GNAT1P11488 350 aa17.44■□□□□ 0.38
CLN6-211ENST00000635754 RAG1P15918 1043 aa17.44■□□□□ 0.38
CLN6-211ENST00000635754 TOB1P50616 345 aaPredicted RBP17.44■□□□□ 0.38
CLN6-211ENST00000635754 NBR1Q14596 966 aa17.44■□□□□ 0.38
CLN6-211ENST00000635754 FERMT3Q86UX7 667 aa17.44■□□□□ 0.38
CLN6-211ENST00000635754 SPRYD3Q8NCJ5 442 aa17.44■□□□□ 0.38
CLN6-211ENST00000635754 MTMR9Q96QG7 549 aa17.44■□□□□ 0.38
CLN6-211ENST00000635754 GABBR1Q9UBS5 961 aa17.44■□□□□ 0.38
CLN6-211ENST00000635754 PCDHA12Q9UN75 941 aa17.44■□□□□ 0.38
CLN6-211ENST00000635754 TRIP12Q14669 1992 aaPredicted RBP17.44■□□□□ 0.38
CLN6-211ENST00000635754 NRCAMQ92823 1304 aa17.43■□□□□ 0.38
CLN6-211ENST00000635754 IGSF9BQ9UPX0 1349 aa17.43■□□□□ 0.38
CLN6-211ENST00000635754 TRIM43BA6NCK2 446 aa17.43■□□□□ 0.38
CLN6-211ENST00000635754 OR52Z1P0C646 297 aa17.43■□□□□ 0.38
CLN6-211ENST00000635754 PDIA4P13667 645 aaKnown RBP17.43■□□□□ 0.38
CLN6-211ENST00000635754 HOXC8P31273 242 aa17.43■□□□□ 0.38
CLN6-211ENST00000635754 TXKP42681 527 aa17.43■□□□□ 0.38
CLN6-211ENST00000635754 PPFIA1Q13136 1202 aa17.43■□□□□ 0.38
CLN6-211ENST00000635754 PRPF38BQ5VTL8 546 aaKnown RBP17.43■□□□□ 0.38
CLN6-211ENST00000635754 CKAP2LQ8IYA6 745 aa17.43■□□□□ 0.38
CLN6-211ENST00000635754 TRIM43Q96BQ3 446 aaPredicted RBP17.43■□□□□ 0.38
CLN6-211ENST00000635754 TMEM60Q9H2L4 133 aa17.43■□□□□ 0.38
CLN6-211ENST00000635754 TTC12Q9H892 705 aaPredicted RBP17.43■□□□□ 0.38
CLN6-211ENST00000635754 PCDHB6Q9Y5E3 794 aa17.43■□□□□ 0.38
CLN6-211ENST00000635754 MAFBQ9Y5Q3 323 aaPredicted RBP17.43■□□□□ 0.38
CLN6-211ENST00000635754 POTEB3A0JP26 581 aa17.42■□□□□ 0.38
CLN6-211ENST00000635754 PLCB4Q15147 1175 aa17.42■□□□□ 0.38
CLN6-211ENST00000635754 NCAPH2Q6IBW4 605 aa17.42■□□□□ 0.38
CLN6-211ENST00000635754 POTEBQ6S5H4 581 aa17.42■□□□□ 0.38
CLN6-211ENST00000635754 CCDC155Q8N6L0 562 aa17.42■□□□□ 0.38
CLN6-211ENST00000635754 LMBR1Q8WVP7 490 aa17.42■□□□□ 0.38
CLN6-211ENST00000635754 ATP6V0A1Q93050 837 aa17.42■□□□□ 0.38
CLN6-211ENST00000635754 LBHD1Q9BQE6 289 aaPredicted RBP17.42■□□□□ 0.38
CLN6-211ENST00000635754 HIPK3Q9H422 1215 aa17.42■□□□□ 0.38
CLN6-211ENST00000635754 SETD4Q9NVD3 440 aa17.42■□□□□ 0.38
CLN6-211ENST00000635754 MTMR6Q9Y217 621 aa17.42■□□□□ 0.38
CLN6-211ENST00000635754 TIMP1P01033 207 aa17.41■□□□□ 0.38
CLN6-211ENST00000635754 CYP2C9P11712 490 aa17.41■□□□□ 0.38
CLN6-211ENST00000635754 SPIRE1Q08AE8 756 aa17.41■□□□□ 0.38
CLN6-211ENST00000635754 PTK7Q13308 1070 aa17.41■□□□□ 0.38
CLN6-211ENST00000635754 GRIK4Q16099 956 aa17.41■□□□□ 0.38
CLN6-211ENST00000635754 ATP8B4Q8TF62 1192 aa17.41■□□□□ 0.38
CLN6-211ENST00000635754 FAM167AQ96KS9 214 aa17.41■□□□□ 0.38
CLN6-211ENST00000635754 NOC4LQ9BVI4 516 aaKnown RBP17.41■□□□□ 0.38
CLN6-211ENST00000635754 PPP1R12CQ9BZL4 782 aa17.41■□□□□ 0.38
CLN6-211ENST00000635754 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.41■□□□□ 0.38
CLN6-211ENST00000635754 TANC1Q9C0D5 1861 aa17.41■□□□□ 0.38
CLN6-211ENST00000635754 EML1O00423 815 aa17.4■□□□□ 0.38
CLN6-211ENST00000635754 LAD1O00515 517 aa17.4■□□□□ 0.38
CLN6-211ENST00000635754 HBP1O60381 514 aa17.4■□□□□ 0.38
CLN6-211ENST00000635754 INSRRP14616 1297 aa17.4■□□□□ 0.38
CLN6-211ENST00000635754 ZNF200P98182 395 aaPredicted RBP17.4■□□□□ 0.38
CLN6-211ENST00000635754 PRKCEQ02156 737 aa17.4■□□□□ 0.38
CLN6-211ENST00000635754 PTGDRQ13258 359 aa17.4■□□□□ 0.38
CLN6-211ENST00000635754 BFSP2Q13515 415 aa17.4■□□□□ 0.38
CLN6-211ENST00000635754 HIC1Q14526 733 aa17.4■□□□□ 0.38
CLN6-211ENST00000635754 TMEM266Q2M3C6 531 aa17.4■□□□□ 0.38
CLN6-211ENST00000635754 BBXQ8WY36 941 aaPredicted RBP17.4■□□□□ 0.38
CLN6-211ENST00000635754 CTAGE1Q96RT6 745 aa17.4■□□□□ 0.38
CLN6-211ENST00000635754 TUBE1Q9UJT0 475 aa17.4■□□□□ 0.38
CLN6-211ENST00000635754 MYH15Q9Y2K3 1946 aa17.4■□□□□ 0.38
CLN6-211ENST00000635754 COL1A2P08123 1366 aa17.4■□□□□ 0.38
CLN6-211ENST00000635754 RRN3P2A6NIE6 340 aa17.39■□□□□ 0.38
CLN6-211ENST00000635754 TREHO43280 583 aa17.39■□□□□ 0.38
CLN6-211ENST00000635754 DKC1O60832 514 aaKnown RBP eCLIP17.39■□□□□ 0.38
CLN6-211ENST00000635754 OATP04181 439 aa17.39■□□□□ 0.38
CLN6-211ENST00000635754 P4HBP07237 508 aaKnown RBP17.39■□□□□ 0.38
CLN6-211ENST00000635754 ATP4AP20648 1035 aa17.39■□□□□ 0.38
CLN6-211ENST00000635754 ITGB8P26012 769 aa17.39■□□□□ 0.38
CLN6-211ENST00000635754 PSMC5P62195 406 aa17.39■□□□□ 0.38
CLN6-211ENST00000635754 IGBP1P78318 339 aa17.39■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms