RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 KCNJ6P48051 423 aa17.74■□□□□ 0.43
LINC00339-209ENST00000635450 ADAM17P78536 824 aa17.74■□□□□ 0.43
LINC00339-209ENST00000635450 MTMR1Q13613 665 aa17.74■□□□□ 0.43
LINC00339-209ENST00000635450 FAM117BQ6P1L5 589 aa17.74■□□□□ 0.43
LINC00339-209ENST00000635450 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.74■□□□□ 0.43
LINC00339-209ENST00000635450 RUFY4Q6ZNE9 571 aa17.74■□□□□ 0.43
LINC00339-209ENST00000635450 REXO1Q8N1G1 1221 aaKnown RBP17.74■□□□□ 0.43
LINC00339-209ENST00000635450 MICALL1Q8N3F8 863 aa17.74■□□□□ 0.43
LINC00339-209ENST00000635450 PHOSPHO2Q8TCD6 241 aa17.74■□□□□ 0.43
LINC00339-209ENST00000635450 VPS54Q9P1Q0 977 aa17.74■□□□□ 0.43
LINC00339-209ENST00000635450 RSPH10B2B2RC85 870 aa17.73■□□□□ 0.43
LINC00339-209ENST00000635450 TLL1O43897 1013 aa17.73■□□□□ 0.43
LINC00339-209ENST00000635450 LGR5O75473 907 aa17.73■□□□□ 0.43
LINC00339-209ENST00000635450 RSPH10BP0C881 870 aa17.73■□□□□ 0.43
LINC00339-209ENST00000635450 CLK2P49760 499 aaKnown RBP17.73■□□□□ 0.43
LINC00339-209ENST00000635450 NLRP5P59047 1200 aa17.73■□□□□ 0.43
LINC00339-209ENST00000635450 ARHGAP4P98171 946 aa17.73■□□□□ 0.43
LINC00339-209ENST00000635450 JAKMIP3Q5VZ66 844 aa17.73■□□□□ 0.43
LINC00339-209ENST00000635450 GIMAP8Q8ND71 665 aaPredicted RBP17.73■□□□□ 0.43
LINC00339-209ENST00000635450 DBF4BQ8NFT6 615 aa17.73■□□□□ 0.43
LINC00339-209ENST00000635450 ARNTL2Q8WYA1 636 aa17.73■□□□□ 0.43
LINC00339-209ENST00000635450 PCYT2Q99447 389 aa17.73■□□□□ 0.43
LINC00339-209ENST00000635450 JADE2Q9NQC1 790 aa17.73■□□□□ 0.43
LINC00339-209ENST00000635450 ZNF215Q9UL58 517 aaPredicted RBP17.73■□□□□ 0.43
LINC00339-209ENST00000635450 ARP10275 920 aa17.72■□□□□ 0.43
LINC00339-209ENST00000635450 XBP1P17861 261 aa17.72■□□□□ 0.43
LINC00339-209ENST00000635450 ZNF76P36508 570 aa17.72■□□□□ 0.43
LINC00339-209ENST00000635450 RBM25P49756 843 aaKnown RBP17.72■□□□□ 0.43
LINC00339-209ENST00000635450 ITGB3BPQ13352 177 aaPredicted RBP17.72■□□□□ 0.43
LINC00339-209ENST00000635450 ME3Q16798 604 aa17.72■□□□□ 0.43
LINC00339-209ENST00000635450 GTF3C6Q969F1 213 aa17.72■□□□□ 0.43
LINC00339-209ENST00000635450 UIMC1Q96RL1 719 aa17.72■□□□□ 0.43
LINC00339-209ENST00000635450 KCNH7Q9NS40 1196 aa17.72■□□□□ 0.43
LINC00339-209ENST00000635450 STK36Q9NRP7 1315 aa17.72■□□□□ 0.43
LINC00339-209ENST00000635450 COL4A6Q14031 1691 aa17.71■□□□□ 0.43
LINC00339-209ENST00000635450 ABHD14A-ACY1A0A1B0GW23 586 aa17.71■□□□□ 0.43
LINC00339-209ENST00000635450 MAFGO15525 162 aa17.71■□□□□ 0.43
LINC00339-209ENST00000635450 LPXNO60711 386 aa17.71■□□□□ 0.43
LINC00339-209ENST00000635450 GJB5O95377 273 aa17.71■□□□□ 0.43
LINC00339-209ENST00000635450 PARNO95453 639 aaKnown RBP17.71■□□□□ 0.43
LINC00339-209ENST00000635450 SREBF1P36956 1147 aa17.71■□□□□ 0.43
LINC00339-209ENST00000635450 PLEKHG4Q58EX7 1191 aa17.71■□□□□ 0.43
LINC00339-209ENST00000635450 FAM177A1Q8N128 213 aaPredicted RBP17.71■□□□□ 0.43
LINC00339-209ENST00000635450 NECAB1Q8N987 351 aa17.71■□□□□ 0.43
LINC00339-209ENST00000635450 GDPD5Q8WTR4 605 aa17.71■□□□□ 0.43
LINC00339-209ENST00000635450 MXRA8Q9BRK3 442 aa17.71■□□□□ 0.43
LINC00339-209ENST00000635450 MTUS1Q9ULD2 1270 aa17.71■□□□□ 0.43
LINC00339-209ENST00000635450 NCOR1O75376 2440 aa17.71■□□□□ 0.43
LINC00339-209ENST00000635450 EVPLQ92817 2033 aa17.71■□□□□ 0.42
LINC00339-209ENST00000635450 KIAA1671Q9BY89 1806 aa17.7■□□□□ 0.42
LINC00339-209ENST00000635450 MYH9P35579 1960 aaKnown RBP17.7■□□□□ 0.42
LINC00339-209ENST00000635450 PPFIA1Q13136 1202 aa17.7■□□□□ 0.42
LINC00339-209ENST00000635450 WASF1Q92558 559 aa17.7■□□□□ 0.42
LINC00339-209ENST00000635450 JPH1Q9HDC5 661 aaPredicted RBP17.7■□□□□ 0.42
LINC00339-209ENST00000635450 ORC3Q9UBD5 711 aaPredicted RBP17.7■□□□□ 0.42
LINC00339-209ENST00000635450 LIMCH1Q9UPQ0 1083 aa17.7■□□□□ 0.42
LINC00339-209ENST00000635450 MTCH2Q9Y6C9 303 aa17.7■□□□□ 0.42
LINC00339-209ENST00000635450 EMSYQ7Z589 1322 aa17.7■□□□□ 0.42
LINC00339-209ENST00000635450 LARGE1O95461 756 aa17.69■□□□□ 0.42
LINC00339-209ENST00000635450 GRB10Q13322 594 aa17.69■□□□□ 0.42
LINC00339-209ENST00000635450 IKBKEQ14164 716 aa17.69■□□□□ 0.42
LINC00339-209ENST00000635450 RABEP1Q15276 862 aa17.69■□□□□ 0.42
LINC00339-209ENST00000635450 GRIK4Q16099 956 aa17.69■□□□□ 0.42
LINC00339-209ENST00000635450 CEP55Q53EZ4 464 aa17.69■□□□□ 0.42
LINC00339-209ENST00000635450 MARCH8Q5T0T0 291 aa17.69■□□□□ 0.42
LINC00339-209ENST00000635450 GALNT17Q6IS24 598 aa17.69■□□□□ 0.42
LINC00339-209ENST00000635450 MYOCDQ8IZQ8 938 aa17.69■□□□□ 0.42
LINC00339-209ENST00000635450 RASGRP4Q8TDF6 673 aa17.69■□□□□ 0.42
LINC00339-209ENST00000635450 TRAPPC12Q8WVT3 735 aa17.69■□□□□ 0.42
LINC00339-209ENST00000635450 SEPT1Q8WYJ6 367 aa17.69■□□□□ 0.42
LINC00339-209ENST00000635450 KIF2CQ99661 725 aa17.69■□□□□ 0.42
LINC00339-209ENST00000635450 ZBED2Q9BTP6 218 aa17.69■□□□□ 0.42
LINC00339-209ENST00000635450 AGO4Q9HCK5 861 aaKnown RBP17.69■□□□□ 0.42
LINC00339-209ENST00000635450 THEGQ9P2T0 379 aa17.69■□□□□ 0.42
LINC00339-209ENST00000635450 SLC9A2Q9UBY0 812 aa17.69■□□□□ 0.42
LINC00339-209ENST00000635450 PCDHA4Q9UN74 947 aa17.69■□□□□ 0.42
LINC00339-209ENST00000635450 RALGAPA2Q2PPJ7 1873 aa17.69■□□□□ 0.42
LINC00339-209ENST00000635450 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.68■□□□□ 0.42
LINC00339-209ENST00000635450 LINC01553A4QN01 128 aa17.68■□□□□ 0.42
LINC00339-209ENST00000635450 KIF28PB7ZC32 967 aa17.68■□□□□ 0.42
LINC00339-209ENST00000635450 FAM86B1E9PN63 330 aa17.68■□□□□ 0.42
LINC00339-209ENST00000635450 DDX39AO00148 427 aaKnown RBP17.68■□□□□ 0.42
LINC00339-209ENST00000635450 CCNE2O96020 404 aa17.68■□□□□ 0.42
LINC00339-209ENST00000635450 CHRNA1P02708 482 aa17.68■□□□□ 0.42
LINC00339-209ENST00000635450 FAM86B2P0C5J1 330 aa17.68■□□□□ 0.42
LINC00339-209ENST00000635450 ACTR2P61160 394 aa17.68■□□□□ 0.42
LINC00339-209ENST00000635450 IGBP1P78318 339 aa17.68■□□□□ 0.42
LINC00339-209ENST00000635450 TFF2Q03403 129 aa17.68■□□□□ 0.42
LINC00339-209ENST00000635450 CRYGNQ8WXF5 182 aa17.68■□□□□ 0.42
LINC00339-209ENST00000635450 GLG1Q92896 1179 aa17.68■□□□□ 0.42
LINC00339-209ENST00000635450 ZSCAN31Q96LW9 406 aaPredicted RBP17.68■□□□□ 0.42
LINC00339-209ENST00000635450 AIFM3Q96NN9 605 aa17.68■□□□□ 0.42
LINC00339-209ENST00000635450 TUBE1Q9UJT0 475 aa17.68■□□□□ 0.42
LINC00339-209ENST00000635450 NRCAMQ92823 1304 aa17.68■□□□□ 0.42
LINC00339-209ENST00000635450 IGLV3-22A0A075B6J6 115 aa17.67■□□□□ 0.42
LINC00339-209ENST00000635450 MBLAC1A4D2B0 266 aaPredicted RBP17.67■□□□□ 0.42
LINC00339-209ENST00000635450 ST18O60284 1047 aa17.67■□□□□ 0.42
LINC00339-209ENST00000635450 CTDNEP1O95476 244 aa17.67■□□□□ 0.42
LINC00339-209ENST00000635450 CYP3A4P08684 503 aa17.67■□□□□ 0.42
LINC00339-209ENST00000635450 GHRP10912 638 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms