RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 MCTP1Q6DN14 999 aa16.64■□□□□ 0.25
CDC42BPB-209ENST00000634889 CCDC60Q8IWA6 550 aaPredicted RBP16.64■□□□□ 0.25
CDC42BPB-209ENST00000634889 CCDC155Q8N6L0 562 aa16.64■□□□□ 0.25
CDC42BPB-209ENST00000634889 HAS1Q92839 578 aa16.64■□□□□ 0.25
CDC42BPB-209ENST00000634889 GJA10Q969M2 543 aa16.64■□□□□ 0.25
CDC42BPB-209ENST00000634889 CTAGE1Q96RT6 745 aa16.64■□□□□ 0.25
CDC42BPB-209ENST00000634889 GDF15Q99988 308 aa16.64■□□□□ 0.25
CDC42BPB-209ENST00000634889 NOC4LQ9BVI4 516 aaKnown RBP16.64■□□□□ 0.25
CDC42BPB-209ENST00000634889 UNC45AQ9H3U1 944 aa16.64■□□□□ 0.25
CDC42BPB-209ENST00000634889 ZNF302Q9NR11 478 aa16.64■□□□□ 0.25
CDC42BPB-209ENST00000634889 MAFBQ9Y5Q3 323 aaPredicted RBP16.64■□□□□ 0.25
CDC42BPB-209ENST00000634889 WDR81Q562E7 1941 aa16.63■□□□□ 0.25
CDC42BPB-209ENST00000634889 PITPNM1O00562 1244 aa16.63■□□□□ 0.25
CDC42BPB-209ENST00000634889 WNT7AO00755 349 aa16.63■□□□□ 0.25
CDC42BPB-209ENST00000634889 CYP2C9P11712 490 aa16.63■□□□□ 0.25
CDC42BPB-209ENST00000634889 ITGB8P26012 769 aa16.63■□□□□ 0.25
CDC42BPB-209ENST00000634889 RBL2Q08999 1139 aa16.63■□□□□ 0.25
CDC42BPB-209ENST00000634889 PTK7Q13308 1070 aa16.63■□□□□ 0.25
CDC42BPB-209ENST00000634889 TTC38Q5R3I4 469 aa16.63■□□□□ 0.25
CDC42BPB-209ENST00000634889 SWSAP1Q6NVH7 229 aa16.63■□□□□ 0.25
CDC42BPB-209ENST00000634889 CAGE1Q8TC20 777 aa16.63■□□□□ 0.25
CDC42BPB-209ENST00000634889 VAV3Q9UKW4 847 aa16.63■□□□□ 0.25
CDC42BPB-209ENST00000634889 IGSF9BQ9UPX0 1349 aa16.63■□□□□ 0.25
CDC42BPB-209ENST00000634889 TANC1Q9C0D5 1861 aa16.63■□□□□ 0.25
CDC42BPB-209ENST00000634889 POTEB3A0JP26 581 aa16.62■□□□□ 0.25
CDC42BPB-209ENST00000634889 CHMP2AO43633 222 aa16.62■□□□□ 0.25
CDC42BPB-209ENST00000634889 MCM7P33993 719 aa16.62■□□□□ 0.25
CDC42BPB-209ENST00000634889 BMP8BP34820 402 aa16.62■□□□□ 0.25
CDC42BPB-209ENST00000634889 ADAM17P78536 824 aa16.62■□□□□ 0.25
CDC42BPB-209ENST00000634889 PPFIA1Q13136 1202 aa16.62■□□□□ 0.25
CDC42BPB-209ENST00000634889 BFSP2Q13515 415 aa16.62■□□□□ 0.25
CDC42BPB-209ENST00000634889 HIC1Q14526 733 aa16.62■□□□□ 0.25
CDC42BPB-209ENST00000634889 PLCB4Q15147 1175 aa16.62■□□□□ 0.25
CDC42BPB-209ENST00000634889 RILPL1Q5EBL4 403 aa16.62■□□□□ 0.25
CDC42BPB-209ENST00000634889 MFSD5Q6N075 450 aa16.62■□□□□ 0.25
CDC42BPB-209ENST00000634889 PDXDC2PQ6P474 469 aa16.62■□□□□ 0.25
CDC42BPB-209ENST00000634889 POTEBQ6S5H4 581 aa16.62■□□□□ 0.25
CDC42BPB-209ENST00000634889 MIER3Q7Z3K6 550 aa16.62■□□□□ 0.25
CDC42BPB-209ENST00000634889 SERINC5Q86VE9 423 aa16.62■□□□□ 0.25
CDC42BPB-209ENST00000634889 ATP8B4Q8TF62 1192 aa16.62■□□□□ 0.25
CDC42BPB-209ENST00000634889 LMBR1Q8WVP7 490 aa16.62■□□□□ 0.25
CDC42BPB-209ENST00000634889 BADQ92934 168 aa16.62■□□□□ 0.25
CDC42BPB-209ENST00000634889 ATP6V0A1Q93050 837 aa16.62■□□□□ 0.25
CDC42BPB-209ENST00000634889 MTMR9Q96QG7 549 aa16.62■□□□□ 0.25
CDC42BPB-209ENST00000634889 PPP1R12CQ9BZL4 782 aa16.62■□□□□ 0.25
CDC42BPB-209ENST00000634889 PRO3102Q9H379 93 aa16.62■□□□□ 0.25
CDC42BPB-209ENST00000634889 SETD4Q9NVD3 440 aa16.62■□□□□ 0.25
CDC42BPB-209ENST00000634889 TRPC6Q9Y210 931 aa16.62■□□□□ 0.25
CDC42BPB-209ENST00000634889 MYH9P35579 1960 aaKnown RBP16.62■□□□□ 0.25
CDC42BPB-209ENST00000634889 RRN3P2A6NIE6 340 aa16.61■□□□□ 0.25
CDC42BPB-209ENST00000634889 HBP1O60381 514 aa16.61■□□□□ 0.25
CDC42BPB-209ENST00000634889 HSP90AA1P07900 732 aaKnown RBP16.61■□□□□ 0.25
CDC42BPB-209ENST00000634889 ATP2B1P20020 1258 aa16.61■□□□□ 0.25
CDC42BPB-209ENST00000634889 MDM2Q00987 491 aaPredicted RBP16.61■□□□□ 0.25
CDC42BPB-209ENST00000634889 SPIRE1Q08AE8 756 aa16.61■□□□□ 0.25
CDC42BPB-209ENST00000634889 GRIK4Q16099 956 aa16.61■□□□□ 0.25
CDC42BPB-209ENST00000634889 CHRDL2Q6WN34 429 aa16.61■□□□□ 0.25
CDC42BPB-209ENST00000634889 TMEM199Q8N511 208 aa16.61■□□□□ 0.25
CDC42BPB-209ENST00000634889 BBXQ8WY36 941 aaPredicted RBP16.61■□□□□ 0.25
CDC42BPB-209ENST00000634889 FAM167AQ96KS9 214 aa16.61■□□□□ 0.25
CDC42BPB-209ENST00000634889 GABBR1Q9UBS5 961 aa16.61■□□□□ 0.25
CDC42BPB-209ENST00000634889 PCDHA12Q9UN75 941 aa16.61■□□□□ 0.25
CDC42BPB-209ENST00000634889 COL1A2P08123 1366 aa16.61■□□□□ 0.25
CDC42BPB-209ENST00000634889 MBLAC1A4D2B0 266 aaPredicted RBP16.6■□□□□ 0.25
CDC42BPB-209ENST00000634889 CAND2O75155 1236 aa16.6■□□□□ 0.25
CDC42BPB-209ENST00000634889 OR52Z1P0C646 297 aa16.6■□□□□ 0.25
CDC42BPB-209ENST00000634889 PDIA4P13667 645 aaKnown RBP16.6■□□□□ 0.25
CDC42BPB-209ENST00000634889 SYT1P21579 422 aa16.6■□□□□ 0.25
CDC42BPB-209ENST00000634889 CYP2C18P33260 490 aa16.6■□□□□ 0.25
CDC42BPB-209ENST00000634889 TOB1P50616 345 aaPredicted RBP16.6■□□□□ 0.25
CDC42BPB-209ENST00000634889 ZNF200P98182 395 aaPredicted RBP16.6■□□□□ 0.25
CDC42BPB-209ENST00000634889 FPGSQ05932 587 aa16.6■□□□□ 0.25
CDC42BPB-209ENST00000634889 BRAPQ7Z569 592 aa16.6■□□□□ 0.25
CDC42BPB-209ENST00000634889 CKAP2LQ8IYA6 745 aa16.6■□□□□ 0.25
CDC42BPB-209ENST00000634889 DHX38Q92620 1227 aaKnown RBP16.6■□□□□ 0.25
CDC42BPB-209ENST00000634889 WNT8AQ9H1J5 351 aa16.6■□□□□ 0.25
CDC42BPB-209ENST00000634889 TMEM60Q9H2L4 133 aa16.6■□□□□ 0.25
CDC42BPB-209ENST00000634889 TTC12Q9H892 705 aaPredicted RBP16.6■□□□□ 0.25
CDC42BPB-209ENST00000634889 TUBE1Q9UJT0 475 aa16.6■□□□□ 0.25
CDC42BPB-209ENST00000634889 KAT6AQ92794 2004 aa16.6■□□□□ 0.25
CDC42BPB-209ENST00000634889 CEP290O15078 2479 aa16.59■□□□□ 0.25
CDC42BPB-209ENST00000634889 TRIP12Q14669 1992 aaPredicted RBP16.59■□□□□ 0.25
CDC42BPB-209ENST00000634889 A0A1W2PPC1 479 aa16.59■□□□□ 0.25
CDC42BPB-209ENST00000634889 VPS37CA5D8V6 355 aaPredicted RBP16.59■□□□□ 0.25
CDC42BPB-209ENST00000634889 LAD1O00515 517 aa16.59■□□□□ 0.25
CDC42BPB-209ENST00000634889 TREHO43280 583 aa16.59■□□□□ 0.25
CDC42BPB-209ENST00000634889 RPLP2P05387 115 aaKnown RBP16.59■□□□□ 0.25
CDC42BPB-209ENST00000634889 INSRRP14616 1297 aa16.59■□□□□ 0.25
CDC42BPB-209ENST00000634889 ATP4AP20648 1035 aa16.59■□□□□ 0.25
CDC42BPB-209ENST00000634889 ZNF174Q15697 407 aa16.59■□□□□ 0.25
CDC42BPB-209ENST00000634889 TRIM71Q2Q1W2 868 aaKnown RBP16.59■□□□□ 0.25
CDC42BPB-209ENST00000634889 TAF2Q6P1X5 1199 aa16.59■□□□□ 0.25
CDC42BPB-209ENST00000634889 RETREG2Q8NC44 543 aa16.59■□□□□ 0.25
CDC42BPB-209ENST00000634889 UBE2OQ9C0C9 1292 aaKnown RBP16.59■□□□□ 0.25
CDC42BPB-209ENST00000634889 FOXD4L1Q9NU39 408 aa16.59■□□□□ 0.25
CDC42BPB-209ENST00000634889 CEP131Q9UPN4 1083 aa16.59■□□□□ 0.25
CDC42BPB-209ENST00000634889 PCDHB6Q9Y5E3 794 aa16.59■□□□□ 0.25
CDC42BPB-209ENST00000634889 UMODL1Q5DID0 1318 aa16.59■□□□□ 0.25
CDC42BPB-209ENST00000634889 EML1O00423 815 aa16.58■□□□□ 0.24
CDC42BPB-209ENST00000634889 DKC1O60832 514 aaKnown RBP eCLIP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms