RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 FOXE3Q13461 319 aa4.49□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 NTRK3Q16288 839 aa4.49□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 PAN2Q504Q3 1202 aaKnown RBP4.49□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 FIGNQ5HY92 759 aa4.49□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 IGFL4Q6B9Z1 124 aa4.49□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 KCTD1Q719H9 257 aa4.49□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.49□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 DTX3Q8N9I9 347 aa4.49□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 PIP4K2CQ8TBX8 421 aa4.49□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 CDC6Q99741 560 aa4.49□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 DSEQ9UL01 958 aa4.49□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 ARVCFO00192 962 aa4.48□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 NPTXRO95502 500 aa4.48□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 CYP1A1P04798 512 aaPredicted RBP4.48□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 ABHD18Q0P651 414 aa4.48□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 RASA3Q14644 834 aa4.48□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 SMAD2Q15796 467 aaKnown RBP4.48□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 FAM47CQ5HY64 1035 aa4.48□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 DNAJC10Q8IXB1 793 aa4.48□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 JMYQ8N9B5 988 aa4.48□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 CUTAO60888 179 aa4.47□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 IL13P35225 146 aa4.47□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 ATXN1P54253 815 aaKnown RBP4.47□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 EPHB4P54760 987 aa4.47□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 PPP2CBP62714 309 aa4.47□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 PPP2CAP67775 309 aa4.47□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 TUSC3Q13454 348 aa4.47□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 GPR19Q15760 415 aa4.47□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 MIIPQ5JXC2 388 aa4.47□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 KCNT2Q6UVM3 1135 aa4.47□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 DPP8Q6V1X1 898 aaPredicted RBP4.47□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 C16orf59Q7L2K0 433 aa4.47□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 STK32CQ86UX6 486 aa4.47□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 AMER2Q8N7J2 671 aa4.47□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 FBXW5Q969U6 566 aa4.47□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 PTPN18Q99952 460 aa4.47□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 JAM3Q9BX67 310 aa4.47□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 TRIM8Q9BZR9 551 aa4.47□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 SEC61A2Q9H9S3 476 aa4.47□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 JADE2Q9NQC1 790 aa4.47□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 PPP1R1BQ9UD71 204 aaPredicted RBP4.47□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 FBXO10Q9UK96 956 aa4.47□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 ADAM29Q9UKF5 820 aa4.47□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 SRPK3Q9UPE1 567 aa4.47□□□□□ -1.69
NPHP3-ACAD11-202ENST00000632629 ZNF839A8K0R7 811 aa4.46□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 SLC27A2O14975 620 aa4.46□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 FBXO21O94952 628 aa4.46□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 HERVK_113P62684 666 aa4.46□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 NFATC3Q12968 1075 aa4.46□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 TRIM61Q5EBN2 209 aa4.46□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 CD276Q5ZPR3 534 aa4.46□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 ARHGEF18Q6ZSZ5 1173 aa4.46□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 SPATC1Q76KD6 591 aa4.46□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 CXXC5Q7LFL8 322 aaKnown RBP4.46□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 MTDHQ86UE4 582 aaKnown RBP4.46□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 PROSER1Q86XN7 944 aa4.46□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 ZSWIM2Q8NEG5 633 aa4.46□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 Q8TCH9 128 aa4.46□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 ZCCHC14Q8WYQ9 949 aaKnown RBP4.46□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 MBD6Q96DN6 1003 aa4.46□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 ZNF503Q96F45 646 aa4.46□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 AJUBAQ96IF1 538 aa4.46□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 DEPDC7Q96QD5 511 aa4.46□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 DHRS4Q9BTZ2 278 aa4.46□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 IPPKQ9H8X2 491 aa4.46□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 PPARGC1AQ9UBK2 798 aaKnown RBP4.46□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 ZFR2Q9UPR6 939 aaKnown RBP4.46□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 KCNQ2O43526 872 aa4.45□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 CLASP2O75122 1294 aaKnown RBP4.45□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 PPFIA2O75334 1257 aa4.45□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 ZNF202O95125 648 aa4.45□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 C6orf222P0C671 652 aaPredicted RBP4.45□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 COL6A1P12109 1028 aa4.45□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 LMO1P25800 156 aa4.45□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 KRTAP15-1Q3LI76 137 aa4.45□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 SLFN13Q68D06 897 aa4.45□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 TRMT10BQ6PF06 316 aaKnown RBP4.45□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 RALYLQ86SE5 291 aaKnown RBP4.45□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 IFNL2Q8IZJ0 200 aa4.45□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 CLEC4DQ8WXI8 215 aa4.45□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 MRPL4Q9BYD3 311 aaKnown RBP4.45□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 KCND1Q9NSA2 647 aa4.45□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 ARHGAP20Q9P2F6 1191 aa4.45□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 CROTQ9UKG9 612 aa4.45□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 MRPS23Q9Y3D9 190 aaKnown RBP4.45□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 A0A087X1B8 175 aa4.44□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 NKRFO15226 690 aaKnown RBP eCLIP4.44□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 NARSO43776 548 aaKnown RBP4.44□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 MAFO75444 373 aaPredicted RBP4.44□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 KNG1P01042 644 aa4.44□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 GTF2F1P35269 517 aaKnown RBP eCLIP4.44□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 MLLT6P55198 1093 aaPredicted RBP4.44□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 ST5P78524 1137 aa4.44□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 LACTBP83111 547 aaPredicted RBP4.44□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 GUCY1A3Q02108 690 aa4.44□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 CRY1Q16526 586 aa4.44□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 SKIDA1Q1XH10 827 aa4.44□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 EP400NLQ6ZTU2 488 aa4.44□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 GSTCDQ8NEC7 633 aa4.44□□□□□ -1.7
NPHP3-ACAD11-202ENST00000632629 THAP3Q8WTV1 239 aaPredicted RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms