RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 PLCG1P19174 1290 aa12.66□□□□□ -0.38
SHPRH-211ENST00000629427 ATP6V1E1P36543 226 aa12.66□□□□□ -0.38
SHPRH-211ENST00000629427 PTPN21Q16825 1174 aa12.66□□□□□ -0.38
SHPRH-211ENST00000629427 ANKRD20A4Q4UJ75 823 aa12.66□□□□□ -0.38
SHPRH-211ENST00000629427 ANKRD20A8PQ5CZ79 823 aa12.66□□□□□ -0.38
SHPRH-211ENST00000629427 ANKRD20A2Q5SQ80 823 aa12.66□□□□□ -0.38
SHPRH-211ENST00000629427 ANKRD20A1Q5TYW2 823 aa12.66□□□□□ -0.38
SHPRH-211ENST00000629427 TRIM67Q6ZTA4 783 aa12.66□□□□□ -0.38
SHPRH-211ENST00000629427 CATSPER4Q7RTX7 472 aa12.66□□□□□ -0.38
SHPRH-211ENST00000629427 PCDHA5Q9Y5H7 936 aa12.66□□□□□ -0.38
SHPRH-211ENST00000629427 NR5A1Q13285 461 aa12.66□□□□□ -0.38
SHPRH-211ENST00000629427 ADCK5Q3MIX3 580 aa12.66□□□□□ -0.38
SHPRH-211ENST00000629427 N4BP2L2Q92802 583 aaPredicted RBP12.66□□□□□ -0.38
SHPRH-211ENST00000629427 COPRSQ9NQ92 184 aa12.66□□□□□ -0.38
SHPRH-211ENST00000629427 ITM2BQ9Y287 266 aa12.66□□□□□ -0.38
SHPRH-211ENST00000629427 MMP1P03956 469 aa12.66□□□□□ -0.38
SHPRH-211ENST00000629427 NOP14P78316 857 aaKnown RBP12.66□□□□□ -0.38
SHPRH-211ENST00000629427 ZKSCAN8Q15776 578 aaPredicted RBP12.66□□□□□ -0.38
SHPRH-211ENST00000629427 TCP11Q8WWU5 503 aa12.66□□□□□ -0.38
SHPRH-211ENST00000629427 LSG1Q9H089 658 aaKnown RBP12.66□□□□□ -0.38
SHPRH-211ENST00000629427 TCP11X2Q5H9J9 407 aa12.66□□□□□ -0.38
SHPRH-211ENST00000629427 C10orf76Q5T2E6 689 aa12.66□□□□□ -0.38
SHPRH-211ENST00000629427 CCDC138Q96M89 665 aa12.66□□□□□ -0.38
SHPRH-211ENST00000629427 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.66□□□□□ -0.38
SHPRH-211ENST00000629427 PAMP19021 973 aa12.65□□□□□ -0.38
SHPRH-211ENST00000629427 MXI1P50539 228 aa12.65□□□□□ -0.38
SHPRH-211ENST00000629427 SCN4BQ8IWT1 228 aa12.65□□□□□ -0.38
SHPRH-211ENST00000629427 SMAP1Q8IYB5 467 aaPredicted RBP12.65□□□□□ -0.38
SHPRH-211ENST00000629427 RECQLP46063 649 aaPredicted RBP12.65□□□□□ -0.38
SHPRH-211ENST00000629427 HABP4Q5JVS0 413 aaKnown RBP12.65□□□□□ -0.38
SHPRH-211ENST00000629427 URGCPQ8TCY9 931 aa12.65□□□□□ -0.38
SHPRH-211ENST00000629427 CCDC124Q96CT7 223 aaKnown RBP12.65□□□□□ -0.38
SHPRH-211ENST00000629427 PPP1R9AQ9ULJ8 1098 aa12.65□□□□□ -0.38
SHPRH-211ENST00000629427 ZBED1O96006 694 aa12.65□□□□□ -0.38
SHPRH-211ENST00000629427 MT-ND3P03897 115 aa12.65□□□□□ -0.38
SHPRH-211ENST00000629427 PSMA2P25787 234 aa12.65□□□□□ -0.38
SHPRH-211ENST00000629427 SLC39A14Q15043 492 aa12.65□□□□□ -0.38
SHPRH-211ENST00000629427 PPP1R13BQ96KQ4 1090 aa12.65□□□□□ -0.38
SHPRH-211ENST00000629427 ANTXR1Q9H6X2 564 aa12.65□□□□□ -0.38
SHPRH-211ENST00000629427 SERPING1P05155 500 aa12.65□□□□□ -0.38
SHPRH-211ENST00000629427 HSPA8P11142 646 aaKnown RBP12.65□□□□□ -0.38
SHPRH-211ENST00000629427 NSUN2Q08J23 767 aaKnown RBP eCLIP12.65□□□□□ -0.38
SHPRH-211ENST00000629427 SLC27A3Q5K4L6 730 aa12.65□□□□□ -0.38
SHPRH-211ENST00000629427 ERICH1Q86X53 443 aa12.65□□□□□ -0.38
SHPRH-211ENST00000629427 KRT82Q9NSB4 513 aa12.65□□□□□ -0.38
SHPRH-211ENST00000629427 PEG3Q9GZU2 1588 aa12.65□□□□□ -0.38
SHPRH-211ENST00000629427 TTI1O43156 1089 aa12.65□□□□□ -0.38
SHPRH-211ENST00000629427 DRP2Q13474 957 aa12.65□□□□□ -0.38
SHPRH-211ENST00000629427 TWF2Q6IBS0 349 aaKnown RBP12.65□□□□□ -0.38
SHPRH-211ENST00000629427 FASTKD5Q7L8L6 764 aaKnown RBP12.65□□□□□ -0.38
SHPRH-211ENST00000629427 FBXL13Q8NEE6 735 aa12.65□□□□□ -0.38
SHPRH-211ENST00000629427 CCHCR1Q8TD31 782 aa12.65□□□□□ -0.38
SHPRH-211ENST00000629427 KIF19Q2TAC6 998 aa12.65□□□□□ -0.39
SHPRH-211ENST00000629427 PIGOQ8TEQ8 1089 aa12.65□□□□□ -0.39
SHPRH-211ENST00000629427 PUS7LQ9H0K6 701 aaKnown RBP12.65□□□□□ -0.39
SHPRH-211ENST00000629427 BCL2L12Q9HB09 334 aa12.65□□□□□ -0.39
SHPRH-211ENST00000629427 GDAQ9Y2T3 454 aa12.65□□□□□ -0.39
SHPRH-211ENST00000629427 RGS12O14924 1447 aa12.64□□□□□ -0.39
SHPRH-211ENST00000629427 TMEM94Q12767 1356 aa12.64□□□□□ -0.39
SHPRH-211ENST00000629427 LRRD1A4D1F6 860 aa12.64□□□□□ -0.39
SHPRH-211ENST00000629427 NEMP1O14524 444 aa12.64□□□□□ -0.39
SHPRH-211ENST00000629427 FTCDO95954 541 aa12.64□□□□□ -0.39
SHPRH-211ENST00000629427 MMP10P09238 476 aa12.64□□□□□ -0.39
SHPRH-211ENST00000629427 GABPB1Q06547 395 aaPredicted RBP12.64□□□□□ -0.39
SHPRH-211ENST00000629427 PDCD2Q16342 344 aaPredicted RBP12.64□□□□□ -0.39
SHPRH-211ENST00000629427 SLFN12LQ6IEE8 588 aa12.64□□□□□ -0.39
SHPRH-211ENST00000629427 BZW1Q7L1Q6 419 aaKnown RBP12.64□□□□□ -0.39
SHPRH-211ENST00000629427 PIM2Q9P1W9 311 aa12.64□□□□□ -0.39
SHPRH-211ENST00000629427 PLS3P13797 630 aa12.64□□□□□ -0.39
SHPRH-211ENST00000629427 PKP1Q13835 747 aa12.64□□□□□ -0.39
SHPRH-211ENST00000629427 GIMAP8Q8ND71 665 aaPredicted RBP12.64□□□□□ -0.39
SHPRH-211ENST00000629427 AFG1LQ8WV93 481 aa12.64□□□□□ -0.39
SHPRH-211ENST00000629427 MASTLQ96GX5 879 aa12.64□□□□□ -0.39
SHPRH-211ENST00000629427 KDM5CP41229 1560 aa12.64□□□□□ -0.39
SHPRH-211ENST00000629427 HNRNPCL2B2RXH8 293 aa12.64□□□□□ -0.39
SHPRH-211ENST00000629427 HNRNPCL1O60812 293 aaKnown RBP12.64□□□□□ -0.39
SHPRH-211ENST00000629427 GH2P01242 217 aa12.64□□□□□ -0.39
SHPRH-211ENST00000629427 ASNSP08243 561 aa12.64□□□□□ -0.39
SHPRH-211ENST00000629427 MTMR1Q13613 665 aa12.64□□□□□ -0.39
SHPRH-211ENST00000629427 MAP4K1Q92918 833 aa12.64□□□□□ -0.39
SHPRH-211ENST00000629427 IFT43Q96FT9 208 aa12.64□□□□□ -0.39
SHPRH-211ENST00000629427 COA1Q9GZY4 146 aa12.64□□□□□ -0.39
SHPRH-211ENST00000629427 PIDD1Q9HB75 910 aa12.64□□□□□ -0.39
SHPRH-211ENST00000629427 G3BP2Q9UN86 482 aaKnown RBP12.64□□□□□ -0.39
SHPRH-211ENST00000629427 KDM5DQ9BY66 1539 aa12.64□□□□□ -0.39
SHPRH-211ENST00000629427 GPT2Q8TD30 523 aa12.64□□□□□ -0.39
SHPRH-211ENST00000629427 SNX19Q92543 992 aa12.64□□□□□ -0.39
SHPRH-211ENST00000629427 NGRNQ9NPE2 291 aaKnown RBP12.64□□□□□ -0.39
SHPRH-211ENST00000629427 PRAMEF22A3QJZ6 481 aa12.64□□□□□ -0.39
SHPRH-211ENST00000629427 hCG_1984214I3L0E3 225 aa12.64□□□□□ -0.39
SHPRH-211ENST00000629427 PGRMC1O00264 195 aaKnown RBP12.64□□□□□ -0.39
SHPRH-211ENST00000629427 CHEK2O96017 543 aa12.64□□□□□ -0.39
SHPRH-211ENST00000629427 OCRLQ01968 901 aa12.64□□□□□ -0.39
SHPRH-211ENST00000629427 GRAPQ13588 217 aa12.64□□□□□ -0.39
SHPRH-211ENST00000629427 SKIV2LQ15477 1246 aaKnown RBP12.64□□□□□ -0.39
SHPRH-211ENST00000629427 ZBTB41Q5SVQ8 909 aa12.64□□□□□ -0.39
SHPRH-211ENST00000629427 ZNF713Q8N859 430 aaPredicted RBP12.64□□□□□ -0.39
SHPRH-211ENST00000629427 GRAPLQ8TC17 118 aaPredicted RBP12.64□□□□□ -0.39
SHPRH-211ENST00000629427 PDE11AQ9HCR9 933 aa12.64□□□□□ -0.39
SHPRH-211ENST00000629427 SEPT2Q15019 361 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms