RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 BOCQ9BWV1 1114 aa4.46□□□□□ -1.7
CNOT1-223ENST00000628857 CD244Q9BZW8 370 aa4.46□□□□□ -1.7
CNOT1-223ENST00000628857 XYLT2Q9H1B5 865 aa4.46□□□□□ -1.7
CNOT1-223ENST00000628857 CABP5Q9NP86 173 aa4.46□□□□□ -1.7
CNOT1-223ENST00000628857 RIC8BQ9NVN3 520 aa4.46□□□□□ -1.7
CNOT1-223ENST00000628857 SAMD15Q9P1V8 674 aa4.46□□□□□ -1.7
CNOT1-223ENST00000628857 TMA7Q9Y2S6 64 aaKnown RBP4.46□□□□□ -1.7
CNOT1-223ENST00000628857 COQ6Q9Y2Z9 468 aa4.46□□□□□ -1.7
CNOT1-223ENST00000628857 ASB1Q9Y576 335 aa4.46□□□□□ -1.7
CNOT1-223ENST00000628857 AOAHP28039 575 aa4.45□□□□□ -1.7
CNOT1-223ENST00000628857 FNTBP49356 437 aa4.45□□□□□ -1.7
CNOT1-223ENST00000628857 SMAD4Q13485 552 aaKnown RBP4.45□□□□□ -1.7
CNOT1-223ENST00000628857 SMAD2Q15796 467 aaKnown RBP4.45□□□□□ -1.7
CNOT1-223ENST00000628857 SKIDA1Q1XH10 827 aa4.45□□□□□ -1.7
CNOT1-223ENST00000628857 DALRD3Q5D0E6 543 aaKnown RBP4.45□□□□□ -1.7
CNOT1-223ENST00000628857 FAM124AQ86V42 546 aa4.45□□□□□ -1.7
CNOT1-223ENST00000628857 RBM12BQ8IXT5 1001 aaKnown RBP4.45□□□□□ -1.7
CNOT1-223ENST00000628857 CHST14Q8NCH0 376 aa4.45□□□□□ -1.7
CNOT1-223ENST00000628857 DDX1Q92499 740 aaKnown RBP4.45□□□□□ -1.7
CNOT1-223ENST00000628857 WNK4Q96J92 1243 aa4.45□□□□□ -1.7
CNOT1-223ENST00000628857 YTHDC1Q96MU7 727 aaKnown RBP4.45□□□□□ -1.7
CNOT1-223ENST00000628857 TEPSINQ96N21 525 aa4.45□□□□□ -1.7
CNOT1-223ENST00000628857 KRTAP9-9Q9BYP9 154 aa4.45□□□□□ -1.7
CNOT1-223ENST00000628857 KRTAP9-4Q9BYQ2 154 aa4.45□□□□□ -1.7
CNOT1-223ENST00000628857 ZCCHC4Q9H5U6 513 aa4.45□□□□□ -1.7
CNOT1-223ENST00000628857 ACSS2Q9NR19 701 aa4.45□□□□□ -1.7
CNOT1-223ENST00000628857 KCND1Q9NSA2 647 aa4.45□□□□□ -1.7
CNOT1-223ENST00000628857 GALNT8Q9NY28 637 aa4.45□□□□□ -1.7
CNOT1-223ENST00000628857 RTEL1Q9NZ71 1219 aa4.45□□□□□ -1.7
CNOT1-223ENST00000628857 ARHGAP20Q9P2F6 1191 aa4.45□□□□□ -1.7
CNOT1-223ENST00000628857 B4GALT6Q9UBX8 382 aa4.45□□□□□ -1.7
CNOT1-223ENST00000628857 CNOT11Q9UKZ1 510 aaKnown RBP4.45□□□□□ -1.7
CNOT1-223ENST00000628857 TNPO3Q9Y5L0 923 aaKnown RBP4.45□□□□□ -1.7
CNOT1-223ENST00000628857 ADAMTS20P59510 1910 aa4.44□□□□□ -1.7
CNOT1-223ENST00000628857 CBX4O00257 560 aa4.44□□□□□ -1.7
CNOT1-223ENST00000628857 TRAF5O00463 557 aa4.44□□□□□ -1.7
CNOT1-223ENST00000628857 HIP1RO75146 1068 aa4.44□□□□□ -1.7
CNOT1-223ENST00000628857 KNG1P01042 644 aa4.44□□□□□ -1.7
CNOT1-223ENST00000628857 CYP17A1P05093 508 aa4.44□□□□□ -1.7
CNOT1-223ENST00000628857 COL6A1P12109 1028 aa4.44□□□□□ -1.7
CNOT1-223ENST00000628857 KRT15P19012 456 aa4.44□□□□□ -1.7
CNOT1-223ENST00000628857 SDSP20132 328 aa4.44□□□□□ -1.7
CNOT1-223ENST00000628857 PTGS1P23219 599 aa4.44□□□□□ -1.7
CNOT1-223ENST00000628857 MLLT6P55198 1093 aaPredicted RBP4.44□□□□□ -1.7
CNOT1-223ENST00000628857 STILQ15468 1287 aa4.44□□□□□ -1.7
CNOT1-223ENST00000628857 CFAP100Q494V2 611 aa4.44□□□□□ -1.7
CNOT1-223ENST00000628857 CDCA2Q69YH5 1023 aaPredicted RBP4.44□□□□□ -1.7
CNOT1-223ENST00000628857 LRRTM3Q86VH5 581 aa4.44□□□□□ -1.7
CNOT1-223ENST00000628857 NME9Q86XW9 330 aa4.44□□□□□ -1.7
CNOT1-223ENST00000628857 NIM1KQ8IY84 436 aa4.44□□□□□ -1.7
CNOT1-223ENST00000628857 PPM1KQ8N3J5 372 aa4.44□□□□□ -1.7
CNOT1-223ENST00000628857 KLHL36Q8N4N3 616 aa4.44□□□□□ -1.7
CNOT1-223ENST00000628857 TXNDC5Q8NBS9 432 aaKnown RBP4.44□□□□□ -1.7
CNOT1-223ENST00000628857 LCORQ96JN0 433 aaPredicted RBP4.44□□□□□ -1.7
CNOT1-223ENST00000628857 SCYL1Q96KG9 808 aa4.44□□□□□ -1.7
CNOT1-223ENST00000628857 BTBD7Q9P203 1132 aa4.44□□□□□ -1.7
CNOT1-223ENST00000628857 FTSJ1Q9UET6 329 aa4.44□□□□□ -1.7
CNOT1-223ENST00000628857 FBXO10Q9UK96 956 aa4.44□□□□□ -1.7
CNOT1-223ENST00000628857 CD2APQ9Y5K6 639 aa4.44□□□□□ -1.7
CNOT1-223ENST00000628857 MROH6A6NGR9 719 aa4.43□□□□□ -1.7
CNOT1-223ENST00000628857 GOLGA6L22H0YM25 854 aa4.43□□□□□ -1.7
CNOT1-223ENST00000628857 M0R2C6 588 aa4.43□□□□□ -1.7
CNOT1-223ENST00000628857 DDX3XO00571 662 aaKnown RBP eCLIP4.43□□□□□ -1.71e-6■■□□□ 13.3
CNOT1-223ENST00000628857 CUTAO60888 179 aa4.43□□□□□ -1.7
CNOT1-223ENST00000628857 GLRX3O76003 335 aaKnown RBP4.43□□□□□ -1.7
CNOT1-223ENST00000628857 KLHL18O94889 574 aa4.43□□□□□ -1.7
CNOT1-223ENST00000628857 FBXO21O94952 628 aa4.43□□□□□ -1.7
CNOT1-223ENST00000628857 JMJD7P0C870 316 aa4.43□□□□□ -1.7
CNOT1-223ENST00000628857 GJA9P57773 515 aa4.43□□□□□ -1.7
CNOT1-223ENST00000628857 IRF9Q00978 393 aa4.43□□□□□ -1.7
CNOT1-223ENST00000628857 RTP5Q14D33 572 aa4.43□□□□□ -1.7
CNOT1-223ENST00000628857 SURF1Q15526 300 aa4.43□□□□□ -1.7
CNOT1-223ENST00000628857 VMACQ2NL98 169 aa4.43□□□□□ -1.7
CNOT1-223ENST00000628857 TKFCQ3LXA3 575 aa4.43□□□□□ -1.7
CNOT1-223ENST00000628857 RGL3Q3MIN7 710 aa4.43□□□□□ -1.7
CNOT1-223ENST00000628857 TM4SF20Q53R12 229 aa4.43□□□□□ -1.7
CNOT1-223ENST00000628857 PRAMEF18Q5VWM3 479 aa4.43□□□□□ -1.7
CNOT1-223ENST00000628857 PKN3Q6P5Z2 889 aa4.43□□□□□ -1.7
CNOT1-223ENST00000628857 GIMAP6Q6P9H5 292 aa4.43□□□□□ -1.7
CNOT1-223ENST00000628857 TMC5Q6UXY8 1006 aa4.43□□□□□ -1.7
CNOT1-223ENST00000628857 REXO1L1PQ8IX06 675 aa4.43□□□□□ -1.7
CNOT1-223ENST00000628857 CISD2Q8N5K1 135 aaKnown RBP4.43□□□□□ -1.7
CNOT1-223ENST00000628857 E2F7Q96AV8 911 aa4.43□□□□□ -1.7
CNOT1-223ENST00000628857 MFSD3Q96ES6 412 aa4.43□□□□□ -1.7
CNOT1-223ENST00000628857 AJUBAQ96IF1 538 aa4.43□□□□□ -1.7
CNOT1-223ENST00000628857 SYT3Q9BQG1 590 aa4.43□□□□□ -1.7
CNOT1-223ENST00000628857 SPATA25Q9BR10 227 aa4.43□□□□□ -1.7
CNOT1-223ENST00000628857 BTBD2Q9BX70 525 aa4.43□□□□□ -1.7
CNOT1-223ENST00000628857 KATNBL1Q9H079 304 aa4.43□□□□□ -1.7
CNOT1-223ENST00000628857 TMEM168Q9H0V1 697 aa4.43□□□□□ -1.7
CNOT1-223ENST00000628857 L2HGDHQ9H9P8 463 aa4.43□□□□□ -1.7
CNOT1-223ENST00000628857 ARHGAP28Q9P2N2 729 aa4.43□□□□□ -1.7
CNOT1-223ENST00000628857 A0A1B0GTL3 188 aa4.42□□□□□ -1.7
CNOT1-223ENST00000628857 FAM83GA6ND36 823 aa4.42□□□□□ -1.7
CNOT1-223ENST00000628857 OTOL1A6NHN0 477 aaPredicted RBP4.42□□□□□ -1.7
CNOT1-223ENST00000628857 FOXP2O15409 715 aa4.42□□□□□ -1.7
CNOT1-223ENST00000628857 CLSTN1O94985 981 aa4.42□□□□□ -1.7
CNOT1-223ENST00000628857 IL18BPO95998 194 aa4.42□□□□□ -1.7
CNOT1-223ENST00000628857 F2P00734 622 aa4.42□□□□□ -1.7
CNOT1-223ENST00000628857 INHBBP09529 407 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms