RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 AGO4Q9HCK5 861 aaKnown RBP11.13□□□□□ -0.63
SOX2-OT-244ENST00000627738 BLOC1S4Q9NUP1 217 aa11.13□□□□□ -0.63
SOX2-OT-244ENST00000627738 KBTBD4Q9NVX7 518 aa11.13□□□□□ -0.63
SOX2-OT-244ENST00000627738 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.13□□□□□ -0.63
SOX2-OT-244ENST00000627738 PKD2L1Q9P0L9 805 aa11.13□□□□□ -0.63
SOX2-OT-244ENST00000627738 STK17AQ9UEE5 414 aa11.13□□□□□ -0.63
SOX2-OT-244ENST00000627738 KDM3AQ9Y4C1 1321 aa11.12□□□□□ -0.63
SOX2-OT-244ENST00000627738 DDX39AO00148 427 aaKnown RBP11.12□□□□□ -0.63
SOX2-OT-244ENST00000627738 IPO5O00410 1097 aaKnown RBP11.12□□□□□ -0.63
SOX2-OT-244ENST00000627738 CHMP2AO43633 222 aa11.12□□□□□ -0.63
SOX2-OT-244ENST00000627738 CNTN2Q02246 1040 aa11.12□□□□□ -0.63
SOX2-OT-244ENST00000627738 PPP2R5CQ13362 524 aa11.12□□□□□ -0.63
SOX2-OT-244ENST00000627738 MTMR1Q13613 665 aa11.12□□□□□ -0.63
SOX2-OT-244ENST00000627738 MORC3Q14149 939 aa11.12□□□□□ -0.63
SOX2-OT-244ENST00000627738 DHX8Q14562 1220 aaKnown RBP11.12□□□□□ -0.63
SOX2-OT-244ENST00000627738 MCM6Q14566 821 aa11.12□□□□□ -0.63
SOX2-OT-244ENST00000627738 WDR78Q5VTH9 848 aa11.12□□□□□ -0.63
SOX2-OT-244ENST00000627738 RGMBQ6NW40 437 aa11.12□□□□□ -0.63
SOX2-OT-244ENST00000627738 SV2BQ7L1I2 683 aa11.12□□□□□ -0.63
SOX2-OT-244ENST00000627738 KCNK18Q7Z418 384 aa11.12□□□□□ -0.63
SOX2-OT-244ENST00000627738 NLRX1Q86UT6 975 aa11.12□□□□□ -0.63
SOX2-OT-244ENST00000627738 CATSPER3Q86XQ3 398 aa11.12□□□□□ -0.63
SOX2-OT-244ENST00000627738 ANKRD13CQ8N6S4 541 aa11.12□□□□□ -0.63
SOX2-OT-244ENST00000627738 TRIML1Q8N9V2 468 aa11.12□□□□□ -0.63
SOX2-OT-244ENST00000627738 GPRC5AQ8NFJ5 357 aa11.12□□□□□ -0.63
SOX2-OT-244ENST00000627738 DNERQ8NFT8 737 aa11.12□□□□□ -0.63
SOX2-OT-244ENST00000627738 LARP4BQ92615 738 aaKnown RBP11.12□□□□□ -0.63
SOX2-OT-244ENST00000627738 RAD54LQ92698 747 aa11.12□□□□□ -0.63
SOX2-OT-244ENST00000627738 LRCH3Q96II8 777 aa11.12□□□□□ -0.63
SOX2-OT-244ENST00000627738 RIT2Q99578 217 aa11.12□□□□□ -0.63
SOX2-OT-244ENST00000627738 NAT10Q9H0A0 1025 aaKnown RBP11.12□□□□□ -0.63
SOX2-OT-244ENST00000627738 NT5C3AQ9H0P0 336 aa11.12□□□□□ -0.63
SOX2-OT-244ENST00000627738 UNC45AQ9H3U1 944 aa11.12□□□□□ -0.63
SOX2-OT-244ENST00000627738 KIAA1024Q9UPX6 916 aa11.12□□□□□ -0.63
SOX2-OT-244ENST00000627738 LCTP09848 1927 aa11.11□□□□□ -0.63
SOX2-OT-244ENST00000627738 MOXD2PA6NHM9 499 aa11.11□□□□□ -0.63
SOX2-OT-244ENST00000627738 E9PMD0 336 aa11.11□□□□□ -0.63
SOX2-OT-244ENST00000627738 MYL1P05976 194 aa11.11□□□□□ -0.63
SOX2-OT-244ENST00000627738 SPATA31C1P0DKV0 1188 aa11.11□□□□□ -0.63
SOX2-OT-244ENST00000627738 NDUFV2P19404 249 aa11.11□□□□□ -0.63
SOX2-OT-244ENST00000627738 BMP6P22004 513 aa11.11□□□□□ -0.63
SOX2-OT-244ENST00000627738 RPA1P27694 616 aa11.11□□□□□ -0.63
SOX2-OT-244ENST00000627738 GCLCP48506 637 aaPredicted RBP11.11□□□□□ -0.63
SOX2-OT-244ENST00000627738 ALDH5A1P51649 535 aaPredicted RBP11.11□□□□□ -0.63
SOX2-OT-244ENST00000627738 CCNA1P78396 465 aa11.11□□□□□ -0.63
SOX2-OT-244ENST00000627738 AMPD3Q01432 767 aa11.11□□□□□ -0.63
SOX2-OT-244ENST00000627738 KCNC4Q03721 635 aa11.11□□□□□ -0.63
SOX2-OT-244ENST00000627738 ITGB3BPQ13352 177 aaPredicted RBP11.11□□□□□ -0.63
SOX2-OT-244ENST00000627738 IQCB1Q15051 598 aa11.11□□□□□ -0.63
SOX2-OT-244ENST00000627738 B3GNT9Q6UX72 402 aa11.11□□□□□ -0.63
SOX2-OT-244ENST00000627738 FAM133AQ8N9E0 248 aa11.11□□□□□ -0.63
SOX2-OT-244ENST00000627738 SMC1BQ8NDV3 1235 aa11.11□□□□□ -0.63
SOX2-OT-244ENST00000627738 SHCBP1Q8NEM2 672 aa11.11□□□□□ -0.63
SOX2-OT-244ENST00000627738 GPRASP2Q96D09 838 aa11.11□□□□□ -0.63
SOX2-OT-244ENST00000627738 GSDMAQ96QA5 445 aa11.11□□□□□ -0.63
SOX2-OT-244ENST00000627738 IWS1Q96ST2 819 aa11.11□□□□□ -0.63
SOX2-OT-244ENST00000627738 PARK7Q99497 189 aaKnown RBP11.11□□□□□ -0.63
SOX2-OT-244ENST00000627738 MMP19Q99542 508 aa11.11□□□□□ -0.63
SOX2-OT-244ENST00000627738 EIF2AK1Q9BQI3 630 aaKnown RBP11.11□□□□□ -0.63
SOX2-OT-244ENST00000627738 POLR3CQ9BUI4 534 aaPredicted RBP11.11□□□□□ -0.63
SOX2-OT-244ENST00000627738 PORCNQ9H237 461 aa11.11□□□□□ -0.63
SOX2-OT-244ENST00000627738 MROH8Q9H579 483 aa11.11□□□□□ -0.63
SOX2-OT-244ENST00000627738 EFCC1Q9HA90 598 aa11.11□□□□□ -0.63
SOX2-OT-244ENST00000627738 ADD3Q9UEY8 706 aaKnown RBP11.11□□□□□ -0.63
SOX2-OT-244ENST00000627738 LIMD1Q9UGP4 676 aa11.11□□□□□ -0.63
SOX2-OT-244ENST00000627738 TLL2Q9Y6L7 1015 aa11.11□□□□□ -0.63
SOX2-OT-244ENST00000627738 ASTN1O14525 1302 aa11.1□□□□□ -0.63
SOX2-OT-244ENST00000627738 MANSC4A6NHS7 340 aaPredicted RBP11.1□□□□□ -0.63
SOX2-OT-244ENST00000627738 BECN2A8MW95 431 aa11.1□□□□□ -0.63
SOX2-OT-244ENST00000627738 MAFGO15525 162 aa11.1□□□□□ -0.63
SOX2-OT-244ENST00000627738 DHX15O43143 795 aaKnown RBP11.1□□□□□ -0.63
SOX2-OT-244ENST00000627738 ATP9AO75110 1047 aa11.1□□□□□ -0.63
SOX2-OT-244ENST00000627738 STAM2O75886 525 aa11.1□□□□□ -0.63
SOX2-OT-244ENST00000627738 RPN1P04843 607 aaKnown RBP11.1□□□□□ -0.63
SOX2-OT-244ENST00000627738 PGK2P07205 417 aa11.1□□□□□ -0.63
SOX2-OT-244ENST00000627738 CYP4A11Q02928 519 aa11.1□□□□□ -0.63
SOX2-OT-244ENST00000627738 FSTL1Q12841 308 aa11.1□□□□□ -0.63
SOX2-OT-244ENST00000627738 KCTD2Q14681 263 aa11.1□□□□□ -0.63
SOX2-OT-244ENST00000627738 EPHA7Q15375 998 aa11.1□□□□□ -0.63
SOX2-OT-244ENST00000627738 STXBP2Q15833 593 aa11.1□□□□□ -0.63
SOX2-OT-244ENST00000627738 NYAP1Q6ZVC0 841 aa11.1□□□□□ -0.63
SOX2-OT-244ENST00000627738 DHX40Q8IX18 779 aaKnown RBP11.1□□□□□ -0.63
SOX2-OT-244ENST00000627738 DYDC2Q96IM9 177 aa11.1□□□□□ -0.63
SOX2-OT-244ENST00000627738 INPP4AQ96PE3 977 aaPredicted RBP11.1□□□□□ -0.63
SOX2-OT-244ENST00000627738 C7orf25Q9BPX7 421 aa11.1□□□□□ -0.63
SOX2-OT-244ENST00000627738 BPIFA3Q9BQP9 254 aa11.1□□□□□ -0.63
SOX2-OT-244ENST00000627738 TRIM9Q9C026 710 aa11.1□□□□□ -0.63
SOX2-OT-244ENST00000627738 TBC1D22BQ9NU19 505 aa11.1□□□□□ -0.63
SOX2-OT-244ENST00000627738 RMND1Q9NWS8 449 aa11.1□□□□□ -0.63
SOX2-OT-244ENST00000627738 RGL1Q9NZL6 768 aa11.1□□□□□ -0.63
SOX2-OT-244ENST00000627738 MORF4L1Q9UBU8 362 aa11.1□□□□□ -0.63
SOX2-OT-244ENST00000627738 MYMKA6NI61 221 aa11.09□□□□□ -0.63
SOX2-OT-244ENST00000627738 GOLGA6L19H0YKK7 550 aa11.09□□□□□ -0.63
SOX2-OT-244ENST00000627738 IGF2BP3O00425 579 aaKnown RBP eCLIP11.09□□□□□ -0.63
SOX2-OT-244ENST00000627738 KLRC4O43908 158 aa11.09□□□□□ -0.63
SOX2-OT-244ENST00000627738 SLITRK3O94933 977 aa11.09□□□□□ -0.63
SOX2-OT-244ENST00000627738 CFHP08603 1231 aa11.09□□□□□ -0.63
SOX2-OT-244ENST00000627738 PLA2G4BP0C869 781 aa11.09□□□□□ -0.63
SOX2-OT-244ENST00000627738 FCER1AP12319 257 aa11.09□□□□□ -0.63
SOX2-OT-244ENST00000627738 ASIC1P78348 528 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms