RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 KLHDC9Q8NEP7 349 aa7.39□□□□□ -1.23
TCF4-249ENST00000625716 MORC4Q8TE76 937 aa7.39□□□□□ -1.23
TCF4-249ENST00000625716 PIBF1Q8WXW3 757 aa7.39□□□□□ -1.23
TCF4-249ENST00000625716 TAAR1Q96RJ0 339 aa7.39□□□□□ -1.23
TCF4-249ENST00000625716 IWS1Q96ST2 819 aa7.39□□□□□ -1.23
TCF4-249ENST00000625716 RMDN3Q96TC7 470 aa7.39□□□□□ -1.23
TCF4-249ENST00000625716 WDR11Q9BZH6 1224 aa7.39□□□□□ -1.23
TCF4-249ENST00000625716 UBE2OQ9C0C9 1292 aaKnown RBP7.39□□□□□ -1.23
TCF4-249ENST00000625716 UPF3AQ9H1J1 476 aaKnown RBP7.39□□□□□ -1.23
TCF4-249ENST00000625716 RIOX1Q9H6W3 641 aa7.39□□□□□ -1.23
TCF4-249ENST00000625716 LY9Q9HBG7 655 aa7.39□□□□□ -1.23
TCF4-249ENST00000625716 PDGFCQ9NRA1 345 aa7.39□□□□□ -1.23
TCF4-249ENST00000625716 MAP3K20Q9NYL2 800 aaKnown RBP7.39□□□□□ -1.23
TCF4-249ENST00000625716 NAP1L2Q9ULW6 460 aaPredicted RBP7.39□□□□□ -1.23
TCF4-249ENST00000625716 DNMT3AQ9Y6K1 912 aaPredicted RBP7.39□□□□□ -1.23
TCF4-249ENST00000625716 PLXNA1Q9UIW2 1896 aa7.38□□□□□ -1.23
TCF4-249ENST00000625716 PDE4DIPQ5VU43 2346 aa7.38□□□□□ -1.23
TCF4-249ENST00000625716 ASTN1O14525 1302 aa7.38□□□□□ -1.23
TCF4-249ENST00000625716 ELP1O95163 1332 aa7.38□□□□□ -1.23
TCF4-249ENST00000625716 MROH7Q68CQ1 1323 aa7.38□□□□□ -1.23
TCF4-249ENST00000625716 A0A0U1RQG5 324 aaPredicted RBP7.38□□□□□ -1.23
TCF4-249ENST00000625716 A0A1B0GTH6 734 aa7.38□□□□□ -1.23
TCF4-249ENST00000625716 A0A1W2PPC1 479 aa7.38□□□□□ -1.23
TCF4-249ENST00000625716 GCOM1H8Y6P7 765 aaPredicted RBP7.38□□□□□ -1.23
TCF4-249ENST00000625716 NKRFO15226 690 aaKnown RBP eCLIP7.38□□□□□ -1.23
TCF4-249ENST00000625716 TLR3O15455 904 aaKnown RBP7.38□□□□□ -1.23
TCF4-249ENST00000625716 ADCY6O43306 1168 aa7.38□□□□□ -1.23
TCF4-249ENST00000625716 PQBP1O60828 265 aaKnown RBP7.38□□□□□ -1.23
TCF4-249ENST00000625716 CABYRO75952 493 aa7.38□□□□□ -1.23
TCF4-249ENST00000625716 POLR2MP0CAP2 368 aa7.38□□□□□ -1.23
TCF4-249ENST00000625716 TXNP10599 105 aaKnown RBP7.38□□□□□ -1.23
TCF4-249ENST00000625716 MSX1P28360 303 aa7.38□□□□□ -1.23
TCF4-249ENST00000625716 SMARCA1P28370 1054 aa7.38□□□□□ -1.23
TCF4-249ENST00000625716 BMP8BP34820 402 aa7.38□□□□□ -1.23
TCF4-249ENST00000625716 MAGEA10P43363 369 aaPredicted RBP7.38□□□□□ -1.23
TCF4-249ENST00000625716 CPT1AP50416 773 aa7.38□□□□□ -1.23
TCF4-249ENST00000625716 BEX3Q00994 111 aa7.38□□□□□ -1.23
TCF4-249ENST00000625716 TLE2Q04725 743 aa7.38□□□□□ -1.23
TCF4-249ENST00000625716 TTLL4Q14679 1199 aa7.38□□□□□ -1.23
TCF4-249ENST00000625716 PPP2R5BQ15173 497 aa7.38□□□□□ -1.23
TCF4-249ENST00000625716 FSCN1Q16658 493 aaKnown RBP7.38□□□□□ -1.23
TCF4-249ENST00000625716 DUSP28Q4G0W2 176 aa7.38□□□□□ -1.23
TCF4-249ENST00000625716 TAPT1Q6NXT6 567 aa7.38□□□□□ -1.23
TCF4-249ENST00000625716 DHX32Q7L7V1 743 aaKnown RBP7.38□□□□□ -1.23
TCF4-249ENST00000625716 RNF135Q8IUD6 432 aa7.38□□□□□ -1.23
TCF4-249ENST00000625716 OR6J1Q8NGC5 347 aa7.38□□□□□ -1.23
TCF4-249ENST00000625716 SYTL5Q8TDW5 730 aaPredicted RBP7.38□□□□□ -1.23
TCF4-249ENST00000625716 SCFD2Q8WU76 684 aa7.38□□□□□ -1.23
TCF4-249ENST00000625716 TBC1D5Q92609 795 aa7.38□□□□□ -1.23
TCF4-249ENST00000625716 CUL5Q93034 780 aa7.38□□□□□ -1.23
TCF4-249ENST00000625716 MYL10Q9BUA6 226 aa7.38□□□□□ -1.23
TCF4-249ENST00000625716 LRRC2Q9BYS8 371 aa7.38□□□□□ -1.23
TCF4-249ENST00000625716 KATNBL1Q9H079 304 aa7.38□□□□□ -1.23
TCF4-249ENST00000625716 RUBCNLQ9H714 662 aa7.38□□□□□ -1.23
TCF4-249ENST00000625716 TMEM39AQ9NV64 488 aa7.38□□□□□ -1.23
TCF4-249ENST00000625716 GNEQ9Y223 722 aaKnown RBP7.38□□□□□ -1.23
TCF4-249ENST00000625716 DDX49Q9Y6V7 483 aaKnown RBP7.38□□□□□ -1.23
TCF4-249ENST00000625716 RBM47A0AV96 593 aaKnown RBP7.37□□□□□ -1.23
TCF4-249ENST00000625716 MYADML2A6NDP7 307 aa7.37□□□□□ -1.23
TCF4-249ENST00000625716 C2CD2LO14523 706 aa7.37□□□□□ -1.23
TCF4-249ENST00000625716 MYL3P08590 195 aa7.37□□□□□ -1.23
TCF4-249ENST00000625716 CLTBP09497 229 aa7.37□□□□□ -1.23
TCF4-249ENST00000625716 MYCLP12524 364 aaPredicted RBP7.37□□□□□ -1.23
TCF4-249ENST00000625716 RAG1P15918 1043 aa7.37□□□□□ -1.23
TCF4-249ENST00000625716 EIF2AK2P19525 551 aaKnown RBP7.37□□□□□ -1.23
TCF4-249ENST00000625716 PSMA5P28066 241 aa7.37□□□□□ -1.23
TCF4-249ENST00000625716 HOXA13P31271 388 aaPredicted RBP7.37□□□□□ -1.23
TCF4-249ENST00000625716 ABL2P42684 1182 aa7.37□□□□□ -1.23
TCF4-249ENST00000625716 SNX17Q15036 470 aa7.37□□□□□ -1.23
TCF4-249ENST00000625716 OXLD1Q5BKU9 147 aa7.37□□□□□ -1.23
TCF4-249ENST00000625716 CCSAPQ6IQ19 270 aaPredicted RBP7.37□□□□□ -1.23
TCF4-249ENST00000625716 TMEM214Q6NUQ4 689 aaKnown RBP7.37□□□□□ -1.23
TCF4-249ENST00000625716 SEPT14Q6ZU15 432 aa7.37□□□□□ -1.23
TCF4-249ENST00000625716 FCHSD1Q86WN1 690 aa7.37□□□□□ -1.23
TCF4-249ENST00000625716 MICU3Q86XE3 530 aa7.37□□□□□ -1.23
TCF4-249ENST00000625716 FANCBQ8NB91 859 aa7.37□□□□□ -1.23
TCF4-249ENST00000625716 SMARCC2Q8TAQ2 1214 aa7.37□□□□□ -1.23
TCF4-249ENST00000625716 MTMR8Q96EF0 704 aa7.37□□□□□ -1.23
TCF4-249ENST00000625716 JAKMIP1Q96N16 626 aaKnown RBP7.37□□□□□ -1.23
TCF4-249ENST00000625716 TOX2Q96NM4 488 aa7.37□□□□□ -1.23
TCF4-249ENST00000625716 GDF15Q99988 308 aa7.37□□□□□ -1.23
TCF4-249ENST00000625716 SPZ1Q9BXG8 430 aa7.37□□□□□ -1.23
TCF4-249ENST00000625716 SEZ6LQ9BYH1 1024 aa7.37□□□□□ -1.23
TCF4-249ENST00000625716 PXMP2Q9NR77 195 aa7.37□□□□□ -1.23
TCF4-249ENST00000625716 ENAMQ9NRM1 1142 aa7.37□□□□□ -1.23
TCF4-249ENST00000625716 NDFIP2Q9NV92 336 aa7.37□□□□□ -1.23
TCF4-249ENST00000625716 RBM28Q9NW13 759 aaKnown RBP7.37□□□□□ -1.23
TCF4-249ENST00000625716 CENPFP49454 3210 aa7.37□□□□□ -1.23
TCF4-249ENST00000625716 ARVCFO00192 962 aa7.36□□□□□ -1.23
TCF4-249ENST00000625716 ZBTB43O43298 467 aa7.36□□□□□ -1.23
TCF4-249ENST00000625716 OIP5O43482 229 aa7.36□□□□□ -1.23
TCF4-249ENST00000625716 CYTH3O43739 400 aa7.36□□□□□ -1.23
TCF4-249ENST00000625716 KPNA6O60684 536 aa7.36□□□□□ -1.23
TCF4-249ENST00000625716 EIF5BO60841 1220 aaKnown RBP7.36□□□□□ -1.23
TCF4-249ENST00000625716 PPP1R11O60927 126 aaPredicted RBP7.36□□□□□ -1.23
TCF4-249ENST00000625716 EIF3JO75822 258 aaKnown RBP7.36□□□□□ -1.23
TCF4-249ENST00000625716 GH1P01241 217 aa7.36□□□□□ -1.23
TCF4-249ENST00000625716 RXRAP19793 462 aa7.36□□□□□ -1.23
TCF4-249ENST00000625716 EDNRBP24530 442 aa7.36□□□□□ -1.23
TCF4-249ENST00000625716 CCND2P30279 289 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms