RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 ATP2A1O14983 1001 aa7.82□□□□□ -1.16
CDKL5-204ENST00000623364 GBP2P32456 591 aaPredicted RBP7.82□□□□□ -1.16
CDKL5-204ENST00000623364 PDE4BQ07343 736 aa7.82□□□□□ -1.16
CDKL5-204ENST00000623364 ADCY1Q08828 1119 aa7.82□□□□□ -1.16
CDKL5-204ENST00000623364 RASGRF1Q13972 1273 aa7.82□□□□□ -1.16
CDKL5-204ENST00000623364 MLF2Q15773 248 aaPredicted RBP7.82□□□□□ -1.16
CDKL5-204ENST00000623364 CACNA1EQ15878 2313 aa7.82□□□□□ -1.16
CDKL5-204ENST00000623364 PAN2Q504Q3 1202 aaKnown RBP7.82□□□□□ -1.16
CDKL5-204ENST00000623364 SPOUT1Q5T280 376 aaKnown RBP7.82□□□□□ -1.16
CDKL5-204ENST00000623364 RSPO2Q6UXX9 243 aaPredicted RBP7.82□□□□□ -1.16
CDKL5-204ENST00000623364 RASGRP2Q7LDG7 609 aa7.82□□□□□ -1.16
CDKL5-204ENST00000623364 THNSL1Q8IYQ7 743 aa7.82□□□□□ -1.16
CDKL5-204ENST00000623364 CHCHD4Q8N4Q1 142 aa7.82□□□□□ -1.16
CDKL5-204ENST00000623364 DEFB124Q8NES8 71 aa7.82□□□□□ -1.16
CDKL5-204ENST00000623364 NSUN4Q96CB9 384 aaKnown RBP7.82□□□□□ -1.16
CDKL5-204ENST00000623364 LIN37Q96GY3 246 aaPredicted RBP7.82□□□□□ -1.16
CDKL5-204ENST00000623364 ARID3AQ99856 593 aa7.82□□□□□ -1.16
CDKL5-204ENST00000623364 SLC32A1Q9H598 525 aa7.82□□□□□ -1.16
CDKL5-204ENST00000623364 LTB4R2Q9NPC1 389 aa7.82□□□□□ -1.16
CDKL5-204ENST00000623364 VPS45Q9NRW7 570 aa7.82□□□□□ -1.16
CDKL5-204ENST00000623364 LZTS1Q9Y250 596 aa7.82□□□□□ -1.16
CDKL5-204ENST00000623364 TMX2Q9Y320 296 aa7.82□□□□□ -1.16
CDKL5-204ENST00000623364 PCNX2A6NKB5 2137 aa7.82□□□□□ -1.16
CDKL5-204ENST00000623364 KIAA1217Q5T5P2 1943 aa7.82□□□□□ -1.16
CDKL5-204ENST00000623364 TTC3P53804 2025 aa7.81□□□□□ -1.16
CDKL5-204ENST00000623364 GRM8O00222 908 aa7.81□□□□□ -1.16
CDKL5-204ENST00000623364 EPN2O95208 641 aa7.81□□□□□ -1.16
CDKL5-204ENST00000623364 SIM1P81133 766 aaPredicted RBP7.81□□□□□ -1.16
CDKL5-204ENST00000623364 APOBRQ0VD83 1088 aa7.81□□□□□ -1.16
CDKL5-204ENST00000623364 SRSF5Q13243 272 aaKnown RBP7.81□□□□□ -1.16
CDKL5-204ENST00000623364 PPP2R5BQ15173 497 aa7.81□□□□□ -1.16
CDKL5-204ENST00000623364 LETM2Q2VYF4 491 aa7.81□□□□□ -1.16
CDKL5-204ENST00000623364 PLA2G2CQ5R387 149 aa7.81□□□□□ -1.16
CDKL5-204ENST00000623364 KANK3Q6NY19 840 aa7.81□□□□□ -1.16
CDKL5-204ENST00000623364 TMC5Q6UXY8 1006 aa7.81□□□□□ -1.16
CDKL5-204ENST00000623364 SCUBE3Q8IX30 993 aa7.81□□□□□ -1.16
CDKL5-204ENST00000623364 PIP4K2CQ8TBX8 421 aa7.81□□□□□ -1.16
CDKL5-204ENST00000623364 AATFQ9NY61 560 aaKnown RBP eCLIP7.81□□□□□ -1.16
CDKL5-204ENST00000623364 C9orf78Q9NZ63 289 aaPredicted RBP7.81□□□□□ -1.16
CDKL5-204ENST00000623364 RAI14Q9P0K7 980 aa7.81□□□□□ -1.16
CDKL5-204ENST00000623364 DDX49Q9Y6V7 483 aaKnown RBP7.81□□□□□ -1.16
CDKL5-204ENST00000623364 CACNA1FO60840 1977 aa7.8□□□□□ -1.16
CDKL5-204ENST00000623364 SPAG17Q6Q759 2223 aa7.8□□□□□ -1.16
CDKL5-204ENST00000623364 ZBED4O75132 1171 aa7.8□□□□□ -1.16
CDKL5-204ENST00000623364 PPP2R1AP30153 589 aa7.8□□□□□ -1.16
CDKL5-204ENST00000623364 SHMT1P34896 483 aa7.8□□□□□ -1.16
CDKL5-204ENST00000623364 CCR3P51677 355 aa7.8□□□□□ -1.16
CDKL5-204ENST00000623364 ATP2B3Q16720 1220 aa7.8□□□□□ -1.16
CDKL5-204ENST00000623364 SLC44A4Q53GD3 710 aa7.8□□□□□ -1.16
CDKL5-204ENST00000623364 GPR149Q86SP6 731 aa7.8□□□□□ -1.16
CDKL5-204ENST00000623364 TTC6Q86TZ1 520 aa7.8□□□□□ -1.16
CDKL5-204ENST00000623364 DHX37Q8IY37 1157 aaKnown RBP7.8□□□□□ -1.16
CDKL5-204ENST00000623364 BBXQ8WY36 941 aaPredicted RBP7.8□□□□□ -1.16
CDKL5-204ENST00000623364 SLF1Q9BQI6 1058 aa7.8□□□□□ -1.16
CDKL5-204ENST00000623364 SMOC1Q9H4F8 434 aa7.8□□□□□ -1.16
CDKL5-204ENST00000623364 PRORYQ9H606 182 aa7.8□□□□□ -1.16
CDKL5-204ENST00000623364 HOMER2Q9NSB8 354 aa7.8□□□□□ -1.16
CDKL5-204ENST00000623364 FAM217BQ9NTX9 383 aaPredicted RBP7.8□□□□□ -1.16
CDKL5-204ENST00000623364 EPS15L1Q9UBC2 864 aa7.8□□□□□ -1.16
CDKL5-204ENST00000623364 PCDHGA5Q9Y5G8 931 aa7.8□□□□□ -1.16
CDKL5-204ENST00000623364 DOCK8Q8NF50 2099 aa7.8□□□□□ -1.16
CDKL5-204ENST00000623364 USP9YO00507 2555 aaPredicted RBP7.79□□□□□ -1.16
CDKL5-204ENST00000623364 TEX51A0A1B0GUA7 166 aa7.79□□□□□ -1.16
CDKL5-204ENST00000623364 SPAARA0A1B0GVQ0 90 aa7.79□□□□□ -1.16
CDKL5-204ENST00000623364 CHURC1-FNTBB4DL54 471 aa7.79□□□□□ -1.16
CDKL5-204ENST00000623364 ENPP3O14638 875 aa7.79□□□□□ -1.16
CDKL5-204ENST00000623364 CLASP2O75122 1294 aaKnown RBP7.79□□□□□ -1.16
CDKL5-204ENST00000623364 CAND2O75155 1236 aa7.79□□□□□ -1.16
CDKL5-204ENST00000623364 CASTP20810 708 aaKnown RBP7.79□□□□□ -1.16
CDKL5-204ENST00000623364 CD72P21854 359 aa7.79□□□□□ -1.16
CDKL5-204ENST00000623364 MPLP40238 635 aa7.79□□□□□ -1.16
CDKL5-204ENST00000623364 FNTBP49356 437 aa7.79□□□□□ -1.16
CDKL5-204ENST00000623364 FKBP5Q13451 457 aaPredicted RBP7.79□□□□□ -1.16
CDKL5-204ENST00000623364 ZNF423Q2M1K9 1284 aa7.79□□□□□ -1.16
CDKL5-204ENST00000623364 CCDC27Q2M243 656 aa7.79□□□□□ -1.16
CDKL5-204ENST00000623364 CCDC102BQ68D86 513 aa7.79□□□□□ -1.16
CDKL5-204ENST00000623364 ZNF574Q6ZN55 896 aaPredicted RBP7.79□□□□□ -1.16
CDKL5-204ENST00000623364 TMEM179Q6ZVK1 233 aa7.79□□□□□ -1.16
CDKL5-204ENST00000623364 G2E3Q7L622 706 aa7.79□□□□□ -1.16
CDKL5-204ENST00000623364 TMC7Q7Z402 723 aa7.79□□□□□ -1.16
CDKL5-204ENST00000623364 CABP7Q86V35 215 aa7.79□□□□□ -1.16
CDKL5-204ENST00000623364 SERINC5Q86VE9 423 aa7.79□□□□□ -1.16
CDKL5-204ENST00000623364 LONP2Q86WA8 852 aa7.79□□□□□ -1.16
CDKL5-204ENST00000623364 TMEM87AQ8NBN3 555 aa7.79□□□□□ -1.16
CDKL5-204ENST00000623364 MRPS27Q92552 414 aaKnown RBP7.79□□□□□ -1.16
CDKL5-204ENST00000623364 STAMQ92783 540 aa7.79□□□□□ -1.16
CDKL5-204ENST00000623364 KAT2BQ92831 832 aa7.79□□□□□ -1.16
CDKL5-204ENST00000623364 ALG1Q9BT22 464 aa7.79□□□□□ -1.16
CDKL5-204ENST00000623364 IER2Q9BTL4 223 aa7.79□□□□□ -1.16
CDKL5-204ENST00000623364 KATNAL1Q9BW62 490 aa7.79□□□□□ -1.16
CDKL5-204ENST00000623364 USP26Q9BXU7 913 aa7.79□□□□□ -1.16
CDKL5-204ENST00000623364 ACAD9Q9H845 621 aa7.79□□□□□ -1.16
CDKL5-204ENST00000623364 RAVER2Q9HCJ3 691 aaKnown RBP7.79□□□□□ -1.16
CDKL5-204ENST00000623364 DKK4Q9UBT3 224 aa7.79□□□□□ -1.16
CDKL5-204ENST00000623364 MRPS17Q9Y2R5 130 aaKnown RBP7.79□□□□□ -1.16
CDKL5-204ENST00000623364 TSC2P49815 1807 aa7.78□□□□□ -1.16
CDKL5-204ENST00000623364 FOCADQ5VW36 1801 aa7.78□□□□□ -1.16
CDKL5-204ENST00000623364 FLNCQ14315 2725 aa7.78□□□□□ -1.16
CDKL5-204ENST00000623364 RBM47A0AV96 593 aaKnown RBP7.78□□□□□ -1.16
CDKL5-204ENST00000623364 N4BP1O75113 896 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms