RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 MUM1L1Q5H9M0 696 aa18.09■□□□□ 0.49
LDB3-208ENST00000623007 RINT1Q6NUQ1 792 aa18.09■□□□□ 0.49
LDB3-208ENST00000623007 ZC3H3Q8IXZ2 948 aaKnown RBP18.09■□□□□ 0.49
LDB3-208ENST00000623007 ANKRD13AQ8IZ07 590 aa18.09■□□□□ 0.49
LDB3-208ENST00000623007 OR8K1Q8NGG5 319 aa18.09■□□□□ 0.49
LDB3-208ENST00000623007 DYDC2Q96IM9 177 aa18.09■□□□□ 0.49
LDB3-208ENST00000623007 IWS1Q96ST2 819 aa18.09■□□□□ 0.49
LDB3-208ENST00000623007 REEP2Q9BRK0 252 aa18.09■□□□□ 0.49
LDB3-208ENST00000623007 UNC45AQ9H3U1 944 aa18.09■□□□□ 0.49
LDB3-208ENST00000623007 ABHD10Q9NUJ1 306 aa18.09■□□□□ 0.49
LDB3-208ENST00000623007 ZNHIT6Q9NWK9 470 aaKnown RBP18.09■□□□□ 0.49
LDB3-208ENST00000623007 ZNF214Q9UL59 606 aaPredicted RBP18.09■□□□□ 0.49
LDB3-208ENST00000623007 DYNC1I1O14576 645 aa18.09■□□□□ 0.49
LDB3-208ENST00000623007 CETN3O15182 167 aa18.09■□□□□ 0.49
LDB3-208ENST00000623007 FAM13AO94988 1023 aa18.09■□□□□ 0.49
LDB3-208ENST00000623007 MAPTP10636 758 aaKnown RBP18.09■□□□□ 0.49
LDB3-208ENST00000623007 TAL1P17542 331 aaPredicted RBP18.09■□□□□ 0.49
LDB3-208ENST00000623007 NFIL3Q16649 462 aa18.09■□□□□ 0.49
LDB3-208ENST00000623007 KNOP1Q1ED39 458 aaKnown RBP18.09■□□□□ 0.49
LDB3-208ENST00000623007 GNPTABQ3T906 1256 aa18.09■□□□□ 0.49
LDB3-208ENST00000623007 LRRC55Q6ZSA7 311 aa18.09■□□□□ 0.49
LDB3-208ENST00000623007 DNERQ8NFT8 737 aa18.09■□□□□ 0.49
LDB3-208ENST00000623007 GOLGA5Q8TBA6 731 aa18.09■□□□□ 0.49
LDB3-208ENST00000623007 NUCKS1Q9H1E3 243 aaKnown RBP18.09■□□□□ 0.49
LDB3-208ENST00000623007 PARVGQ9HBI0 331 aa18.09■□□□□ 0.49
LDB3-208ENST00000623007 COL20A1Q9P218 1284 aa18.09■□□□□ 0.49
LDB3-208ENST00000623007 RLFQ13129 1914 aa18.08■□□□□ 0.49
LDB3-208ENST00000623007 IQCA1LA6NCM1 817 aa18.08■□□□□ 0.48
LDB3-208ENST00000623007 TRAF5O00463 557 aa18.08■□□□□ 0.48
LDB3-208ENST00000623007 TRIM21P19474 475 aaKnown RBP18.08■□□□□ 0.48
LDB3-208ENST00000623007 VGLL4Q14135 290 aa18.08■□□□□ 0.48
LDB3-208ENST00000623007 ZNF746Q6NUN9 644 aaPredicted RBP18.08■□□□□ 0.48
LDB3-208ENST00000623007 NSMFQ6X4W1 530 aa18.08■□□□□ 0.48
LDB3-208ENST00000623007 C1orf186Q6ZWK4 172 aa18.08■□□□□ 0.48
LDB3-208ENST00000623007 EPM2AIP1Q7L775 607 aaPredicted RBP18.08■□□□□ 0.48
LDB3-208ENST00000623007 VSIG10LQ86VR7 867 aa18.08■□□□□ 0.48
LDB3-208ENST00000623007 ERO1BQ86YB8 467 aa18.08■□□□□ 0.48
LDB3-208ENST00000623007 MPHOSPH6Q99547 160 aaKnown RBP18.08■□□□□ 0.48
LDB3-208ENST00000623007 SENP7Q9BQF6 1050 aa18.08■□□□□ 0.48
LDB3-208ENST00000623007 LXNQ9BS40 222 aa18.08■□□□□ 0.48
LDB3-208ENST00000623007 NDST4Q9H3R1 872 aa18.08■□□□□ 0.48
LDB3-208ENST00000623007 METTL14Q9HCE5 456 aaKnown RBP18.08■□□□□ 0.48
LDB3-208ENST00000623007 HOMER2Q9NSB8 354 aa18.08■□□□□ 0.48
LDB3-208ENST00000623007 SNCAIPQ9Y6H5 919 aa18.08■□□□□ 0.48
LDB3-208ENST00000623007 PFASO15067 1338 aa18.08■□□□□ 0.48
LDB3-208ENST00000623007 WDR90Q96KV7 1748 aa18.07■□□□□ 0.48
LDB3-208ENST00000623007 PAPPA2Q9BXP8 1791 aa18.07■□□□□ 0.48
LDB3-208ENST00000623007 ARHGEF35A5YM69 484 aa18.07■□□□□ 0.48
LDB3-208ENST00000623007 WDR64B1ANS9 1081 aa18.07■□□□□ 0.48
LDB3-208ENST00000623007 CHMP2AO43633 222 aa18.07■□□□□ 0.48
LDB3-208ENST00000623007 KRT9P35527 623 aa18.07■□□□□ 0.48
LDB3-208ENST00000623007 QARSP47897 775 aaKnown RBP18.07■□□□□ 0.48
LDB3-208ENST00000623007 ZNF131P52739 623 aa18.07■□□□□ 0.48
LDB3-208ENST00000623007 PSMC6P62333 389 aa18.07■□□□□ 0.48
LDB3-208ENST00000623007 UBXN2AP68543 259 aa18.07■□□□□ 0.48
LDB3-208ENST00000623007 ZBED6P86452 979 aa18.07■□□□□ 0.48
LDB3-208ENST00000623007 C9orf131Q5VYM1 1079 aa18.07■□□□□ 0.48
LDB3-208ENST00000623007 LBX2Q6XYB7 198 aa18.07■□□□□ 0.48
LDB3-208ENST00000623007 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.07■□□□□ 0.48
LDB3-208ENST00000623007 SMAP1Q8IYB5 467 aaPredicted RBP18.07■□□□□ 0.48
LDB3-208ENST00000623007 SCFD1Q8WVM8 642 aa18.07■□□□□ 0.48
LDB3-208ENST00000623007 TAAR1Q96RJ0 339 aa18.07■□□□□ 0.48
LDB3-208ENST00000623007 DNAJC7Q99615 494 aa18.07■□□□□ 0.48
LDB3-208ENST00000623007 KCTD10Q9H3F6 313 aa18.07■□□□□ 0.48
LDB3-208ENST00000623007 ZHX3Q9H4I2 956 aa18.07■□□□□ 0.48
LDB3-208ENST00000623007 TYW1Q9NV66 732 aaKnown RBP18.07■□□□□ 0.48
LDB3-208ENST00000623007 RGL1Q9NZL6 768 aa18.07■□□□□ 0.48
LDB3-208ENST00000623007 KCNG1Q9UIX4 513 aa18.07■□□□□ 0.48
LDB3-208ENST00000623007 PPP2R2CQ9Y2T4 447 aa18.07■□□□□ 0.48
LDB3-208ENST00000623007 PHLPP2Q6ZVD8 1323 aa18.07■□□□□ 0.48
LDB3-208ENST00000623007 LOC285556D6RIA3 1793 aa18.07■□□□□ 0.48
LDB3-208ENST00000623007 SLC16A3O15427 465 aaKnown RBP18.06■□□□□ 0.48
LDB3-208ENST00000623007 MRPS9P82933 396 aaKnown RBP18.06■□□□□ 0.48
LDB3-208ENST00000623007 CDK17Q00537 523 aa18.06■□□□□ 0.48
LDB3-208ENST00000623007 BAATQ14032 418 aaPredicted RBP18.06■□□□□ 0.48
LDB3-208ENST00000623007 CTTNQ14247 550 aaKnown RBP18.06■□□□□ 0.48
LDB3-208ENST00000623007 CCDC40Q4G0X9 1142 aa18.06■□□□□ 0.48
LDB3-208ENST00000623007 FRMD5Q7Z6J6 570 aa18.06■□□□□ 0.48
LDB3-208ENST00000623007 C4orf19Q8IY42 314 aa18.06■□□□□ 0.48
LDB3-208ENST00000623007 HPS3Q969F9 1004 aa18.06■□□□□ 0.48
LDB3-208ENST00000623007 MRPL44Q9H9J2 332 aaKnown RBP18.06■□□□□ 0.48
LDB3-208ENST00000623007 TRMT1Q9NXH9 659 aaKnown RBP18.06■□□□□ 0.48
LDB3-208ENST00000623007 CGNQ9P2M7 1197 aaKnown RBP18.06■□□□□ 0.48
LDB3-208ENST00000623007 PCDHB13Q9Y5F0 798 aa18.06■□□□□ 0.48
LDB3-208ENST00000623007 NFASCO94856 1347 aa18.06■□□□□ 0.48
LDB3-208ENST00000623007 SPDYE16A6NNV3 312 aaPredicted RBP18.06■□□□□ 0.48
LDB3-208ENST00000623007 DHX15O43143 795 aaKnown RBP18.06■□□□□ 0.48
LDB3-208ENST00000623007 EIF2AK2P19525 551 aaKnown RBP18.06■□□□□ 0.48
LDB3-208ENST00000623007 ABCD1P33897 745 aa18.06■□□□□ 0.48
LDB3-208ENST00000623007 ETF1P62495 437 aaKnown RBP18.06■□□□□ 0.48
LDB3-208ENST00000623007 MIIPQ5JXC2 388 aa18.06■□□□□ 0.48
LDB3-208ENST00000623007 PRAMEF18Q5VWM3 479 aa18.06■□□□□ 0.48
LDB3-208ENST00000623007 SLC30A10Q6XR72 485 aa18.06■□□□□ 0.48
LDB3-208ENST00000623007 SFR1Q86XK3 245 aa18.06■□□□□ 0.48
LDB3-208ENST00000623007 CCDC43Q96MW1 224 aaKnown RBP18.06■□□□□ 0.48
LDB3-208ENST00000623007 INPP4AQ96PE3 977 aaPredicted RBP18.06■□□□□ 0.48
LDB3-208ENST00000623007 ANKEF1Q9NU02 776 aa18.06■□□□□ 0.48
LDB3-208ENST00000623007 LARSQ9P2J5 1176 aaKnown RBP18.06■□□□□ 0.48
LDB3-208ENST00000623007 COL11A1P12107 1806 aaPredicted RBP18.05■□□□□ 0.48
LDB3-208ENST00000623007 SCN4AP35499 1836 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms