RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 POLD1P28340 1107 aa13.19□□□□□ -0.3
TP53-227ENST00000622645 C2orf54Q08AI8 447 aa13.19□□□□□ -0.3
TP53-227ENST00000622645 MAPK8IP2Q13387 824 aaPredicted RBP13.19□□□□□ -0.3
TP53-227ENST00000622645 ZYXQ15942 572 aaKnown RBP13.19□□□□□ -0.3
TP53-227ENST00000622645 KNOP1Q1ED39 458 aaKnown RBP13.19□□□□□ -0.3
TP53-227ENST00000622645 EDRF1Q3B7T1 1238 aa13.19□□□□□ -0.3
TP53-227ENST00000622645 CCDC174Q6PII3 467 aa13.19□□□□□ -0.3
TP53-227ENST00000622645 CDAN1Q8IWY9 1227 aa13.19□□□□□ -0.3
TP53-227ENST00000622645 PIGOQ8TEQ8 1089 aa13.19□□□□□ -0.3
TP53-227ENST00000622645 EIF2AK1Q9BQI3 630 aaKnown RBP13.19□□□□□ -0.3
TP53-227ENST00000622645 IGLV3-22A0A075B6J6 115 aa13.18□□□□□ -0.3
TP53-227ENST00000622645 LRRIQ3A6PVS8 624 aaPredicted RBP13.18□□□□□ -0.3
TP53-227ENST00000622645 NCK2O43639 380 aa13.18□□□□□ -0.3
TP53-227ENST00000622645 TUBBP07437 444 aa13.18□□□□□ -0.3
TP53-227ENST00000622645 EPS15P42566 896 aa13.18□□□□□ -0.3
TP53-227ENST00000622645 KCNA1Q09470 495 aa13.18□□□□□ -0.3
TP53-227ENST00000622645 RAPGEF1Q13905 1077 aa13.18□□□□□ -0.3
TP53-227ENST00000622645 CTTNQ14247 550 aaKnown RBP13.18□□□□□ -0.3
TP53-227ENST00000622645 NFRKBQ6P4R8 1299 aa13.18□□□□□ -0.3
TP53-227ENST00000622645 ZC3H3Q8IXZ2 948 aaKnown RBP13.18□□□□□ -0.3
TP53-227ENST00000622645 GBP3Q9H0R5 595 aa13.18□□□□□ -0.3
TP53-227ENST00000622645 SPDYE2BA6NHP3 402 aa13.18□□□□□ -0.3
TP53-227ENST00000622645 ZBTB39O15060 712 aa13.18□□□□□ -0.3
TP53-227ENST00000622645 CHMP2AO43633 222 aa13.18□□□□□ -0.3
TP53-227ENST00000622645 SERPING1P05155 500 aa13.18□□□□□ -0.3
TP53-227ENST00000622645 SPDYE6P0CI01 402 aa13.18□□□□□ -0.3
TP53-227ENST00000622645 ACTN1P12814 892 aa13.18□□□□□ -0.3
TP53-227ENST00000622645 CYP2C19P33261 490 aa13.18□□□□□ -0.3
TP53-227ENST00000622645 PPP4R3CPQ6ZMV5 832 aa13.18□□□□□ -0.3
TP53-227ENST00000622645 EPM2AIP1Q7L775 607 aaPredicted RBP13.18□□□□□ -0.3
TP53-227ENST00000622645 FAM133AQ8N9E0 248 aa13.18□□□□□ -0.3
TP53-227ENST00000622645 RPGRIP1Q96KN7 1286 aa13.18□□□□□ -0.3
TP53-227ENST00000622645 GDAP1L1Q96MZ0 367 aa13.18□□□□□ -0.3
TP53-227ENST00000622645 WDR18Q9BV38 432 aa13.18□□□□□ -0.3
TP53-227ENST00000622645 SMARCAL1Q9NZC9 954 aa13.18□□□□□ -0.3
TP53-227ENST00000622645 FAM184BQ9ULE4 1060 aa13.18□□□□□ -0.3
TP53-227ENST00000622645 TRAF3IP3Q9Y228 551 aa13.18□□□□□ -0.3
TP53-227ENST00000622645 ZBTB12Q9Y330 459 aaPredicted RBP13.18□□□□□ -0.3
TP53-227ENST00000622645 PIK3CDO00329 1044 aa13.17□□□□□ -0.3
TP53-227ENST00000622645 PJA2O43164 708 aa13.17□□□□□ -0.3
TP53-227ENST00000622645 CYP3A4P08684 503 aa13.17□□□□□ -0.3
TP53-227ENST00000622645 SLC9A1P19634 815 aa13.17□□□□□ -0.3
TP53-227ENST00000622645 NAP1L1P55209 391 aaKnown RBP13.17□□□□□ -0.3
TP53-227ENST00000622645 ALS2CR12Q96Q35 445 aa13.17□□□□□ -0.3
TP53-227ENST00000622645 IKZF4Q9H2S9 585 aa13.17□□□□□ -0.3
TP53-227ENST00000622645 ARHGEF10LQ9HCE6 1279 aa13.17□□□□□ -0.3
TP53-227ENST00000622645 EHD2Q9NZN4 543 aa13.17□□□□□ -0.3
TP53-227ENST00000622645 TMOD2Q9NZR1 351 aa13.17□□□□□ -0.3
TP53-227ENST00000622645 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.17□□□□□ -0.3
TP53-227ENST00000622645 HERC5Q9UII4 1024 aaKnown RBP13.17□□□□□ -0.3
TP53-227ENST00000622645 HDAC9Q9UKV0 1011 aa13.17□□□□□ -0.3
TP53-227ENST00000622645 RABGAP1Q9Y3P9 1069 aa13.17□□□□□ -0.3
TP53-227ENST00000622645 ZNF646O15015 1829 aaPredicted RBP13.17□□□□□ -0.3
TP53-227ENST00000622645 AKAP3O75969 853 aa13.17□□□□□ -0.3
TP53-227ENST00000622645 MRPS25P82663 173 aaKnown RBP13.17□□□□□ -0.3
TP53-227ENST00000622645 MIGA2Q7L4E1 593 aa13.17□□□□□ -0.3
TP53-227ENST00000622645 OTOP1Q7RTM1 612 aa13.17□□□□□ -0.3
TP53-227ENST00000622645 TPH2Q8IWU9 490 aa13.17□□□□□ -0.3
TP53-227ENST00000622645 GSPT2Q8IYD1 628 aaKnown RBP13.17□□□□□ -0.3
TP53-227ENST00000622645 SYN2Q92777 582 aaPredicted RBP13.17□□□□□ -0.3
TP53-227ENST00000622645 OSBPL9Q96SU4 736 aa13.17□□□□□ -0.3
TP53-227ENST00000622645 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.17□□□□□ -0.3
TP53-227ENST00000622645 NUCKS1Q9H1E3 243 aaKnown RBP13.17□□□□□ -0.3
TP53-227ENST00000622645 ARMCX3Q9UH62 379 aaPredicted RBP13.17□□□□□ -0.3
TP53-227ENST00000622645 ADAMTS1Q9UHI8 967 aa13.17□□□□□ -0.3
TP53-227ENST00000622645 TMX2Q9Y320 296 aa13.17□□□□□ -0.3
TP53-227ENST00000622645 A0A087X0T9 212 aa13.16□□□□□ -0.3
TP53-227ENST00000622645 RBAK-RBAKDNI3L0D1 243 aa13.16□□□□□ -0.3
TP53-227ENST00000622645 GCNT3O95395 438 aa13.16□□□□□ -0.3
TP53-227ENST00000622645 FAM228BP0C875 321 aa13.16□□□□□ -0.3
TP53-227ENST00000622645 MATR3P43243 847 aaKnown RBP eCLIP13.16□□□□□ -0.3
TP53-227ENST00000622645 CASP4P49662 377 aa13.16□□□□□ -0.3
TP53-227ENST00000622645 ARHGAP27Q6ZUM4 889 aa13.16□□□□□ -0.3
TP53-227ENST00000622645 HSD17B14Q9BPX1 270 aa13.16□□□□□ -0.3
TP53-227ENST00000622645 POLR3CQ9BUI4 534 aaPredicted RBP13.16□□□□□ -0.3
TP53-227ENST00000622645 GANQ9H2C0 597 aa13.16□□□□□ -0.3
TP53-227ENST00000622645 ZNF70Q9UC06 446 aaPredicted RBP13.16□□□□□ -0.3
TP53-227ENST00000622645 MYH10P35580 1976 aa13.16□□□□□ -0.3
TP53-227ENST00000622645 CLIC2O15247 247 aa13.16□□□□□ -0.3
TP53-227ENST00000622645 TBCAO75347 108 aaKnown RBP13.16□□□□□ -0.3
TP53-227ENST00000622645 SLITRK3O94933 977 aa13.16□□□□□ -0.3
TP53-227ENST00000622645 EYA4O95677 639 aa13.16□□□□□ -0.3
TP53-227ENST00000622645 MYBL2P10244 700 aa13.16□□□□□ -0.3
TP53-227ENST00000622645 FAM193AP78312 1265 aa13.16□□□□□ -0.3
TP53-227ENST00000622645 EZH2Q15910 746 aaKnown RBP13.16□□□□□ -0.3
TP53-227ENST00000622645 DCAF17Q5H9S7 520 aaPredicted RBP13.16□□□□□ -0.3
TP53-227ENST00000622645 RINT1Q6NUQ1 792 aa13.16□□□□□ -0.3
TP53-227ENST00000622645 NOX5Q96PH1 765 aa13.16□□□□□ -0.3
TP53-227ENST00000622645 TLR10Q9BXR5 811 aa13.16□□□□□ -0.3
TP53-227ENST00000622645 VEZTQ9HBM0 779 aa13.16□□□□□ -0.3
TP53-227ENST00000622645 ADAM21Q9UKJ8 722 aa13.16□□□□□ -0.3
TP53-227ENST00000622645 ZBTB21Q9ULJ3 1066 aa13.16□□□□□ -0.3
TP53-227ENST00000622645 PDXKO00764 312 aa13.16□□□□□ -0.3
TP53-227ENST00000622645 EIF3JO75822 258 aaKnown RBP13.16□□□□□ -0.3
TP53-227ENST00000622645 KLHL30Q0D2K2 578 aa13.16□□□□□ -0.3
TP53-227ENST00000622645 DLGAP5Q15398 846 aa13.16□□□□□ -0.3
TP53-227ENST00000622645 KLHDC7AQ5VTJ3 777 aa13.16□□□□□ -0.3
TP53-227ENST00000622645 LRCH2Q5VUJ6 765 aa13.16□□□□□ -0.3
TP53-227ENST00000622645 RSBN1LQ6PCB5 846 aaPredicted RBP13.16□□□□□ -0.3
TP53-227ENST00000622645 FRMD5Q7Z6J6 570 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms