RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 LACRTQ9GZZ8 138 aa14□□□□□ -0.17
MSH6-215ENST00000622629 RNF14Q9UBS8 474 aa14□□□□□ -0.17
MSH6-215ENST00000622629 LTN1O94822 1766 aa14□□□□□ -0.17
MSH6-215ENST00000622629 NR3C1P04150 777 aa14□□□□□ -0.17
MSH6-215ENST00000622629 GAP43P17677 238 aa14□□□□□ -0.17
MSH6-215ENST00000622629 PDIA5Q14554 519 aa14□□□□□ -0.17
MSH6-215ENST00000622629 SUPT20HQ8NEM7 779 aa14□□□□□ -0.17
MSH6-215ENST00000622629 MAGOHBQ96A72 148 aaKnown RBP14□□□□□ -0.17
MSH6-215ENST00000622629 CEP63Q96MT8 703 aa14□□□□□ -0.17
MSH6-215ENST00000622629 SNX12Q9UMY4 172 aa14□□□□□ -0.17
MSH6-215ENST00000622629 ATP8A1Q9Y2Q0 1164 aa14□□□□□ -0.17
MSH6-215ENST00000622629 FAM208AQ9UK61 1670 aaKnown RBP14□□□□□ -0.17
MSH6-215ENST00000622629 A0A0U1RQJ8 604 aa13.99□□□□□ -0.17
MSH6-215ENST00000622629 FAM237AA0A1B0GTK4 181 aa13.99□□□□□ -0.17
MSH6-215ENST00000622629 SLC37A4O43826 429 aa13.99□□□□□ -0.17
MSH6-215ENST00000622629 ZBED4O75132 1171 aa13.99□□□□□ -0.17
MSH6-215ENST00000622629 TBX2Q13207 712 aaPredicted RBP13.99□□□□□ -0.17
MSH6-215ENST00000622629 RGL1Q9NZL6 768 aa13.99□□□□□ -0.17
MSH6-215ENST00000622629 BCS1LQ9Y276 419 aa13.99□□□□□ -0.17
MSH6-215ENST00000622629 PDS5AQ29RF7 1337 aaKnown RBP13.99□□□□□ -0.17
MSH6-215ENST00000622629 GPR75-ASB3A0A0A6YYF3 556 aa13.99□□□□□ -0.17
MSH6-215ENST00000622629 N4BP1O75113 896 aaKnown RBP13.99□□□□□ -0.17
MSH6-215ENST00000622629 LMNB1P20700 586 aa13.99□□□□□ -0.17
MSH6-215ENST00000622629 TTI2Q6NXR4 508 aa13.99□□□□□ -0.17
MSH6-215ENST00000622629 MGARPQ8TDB4 240 aa13.99□□□□□ -0.17
MSH6-215ENST00000622629 COG1Q8WTW3 980 aa13.99□□□□□ -0.17
MSH6-215ENST00000622629 MS4A14Q96JA4 679 aa13.99□□□□□ -0.17
MSH6-215ENST00000622629 KBTBD4Q9NVX7 518 aa13.99□□□□□ -0.17
MSH6-215ENST00000622629 STRN3Q13033 797 aa13.99□□□□□ -0.17
MSH6-215ENST00000622629 KNOP1Q1ED39 458 aaKnown RBP13.99□□□□□ -0.17
MSH6-215ENST00000622629 SLC10A5Q5PT55 438 aa13.99□□□□□ -0.17
MSH6-215ENST00000622629 PDXDC1Q6P996 788 aa13.99□□□□□ -0.17
MSH6-215ENST00000622629 PPP4R3CPQ6ZMV5 832 aa13.99□□□□□ -0.17
MSH6-215ENST00000622629 NIM1KQ8IY84 436 aa13.99□□□□□ -0.17
MSH6-215ENST00000622629 IKBKGQ9Y6K9 419 aa13.99□□□□□ -0.17
MSH6-215ENST00000622629 RGS16O15492 202 aaPredicted RBP13.99□□□□□ -0.17
MSH6-215ENST00000622629 PLTPP55058 493 aa13.99□□□□□ -0.17
MSH6-215ENST00000622629 PPP4CP60510 307 aa13.99□□□□□ -0.17
MSH6-215ENST00000622629 AP3B2Q13367 1082 aa13.99□□□□□ -0.17
MSH6-215ENST00000622629 EMBQ6PCB8 327 aa13.99□□□□□ -0.17
MSH6-215ENST00000622629 WDR11Q9BZH6 1224 aa13.99□□□□□ -0.17
MSH6-215ENST00000622629 UBE2TQ9NPD8 197 aaPredicted RBP13.99□□□□□ -0.17
MSH6-215ENST00000622629 PICK1Q9NRD5 415 aa13.99□□□□□ -0.17
MSH6-215ENST00000622629 PTPN22Q9Y2R2 807 aa13.99□□□□□ -0.17
MSH6-215ENST00000622629 PDCLQ13371 301 aa13.98□□□□□ -0.17
MSH6-215ENST00000622629 ORC2Q13416 577 aaPredicted RBP13.98□□□□□ -0.17
MSH6-215ENST00000622629 EZH2Q15910 746 aaKnown RBP13.98□□□□□ -0.17
MSH6-215ENST00000622629 ARHGEF16Q5VV41 709 aa13.98□□□□□ -0.17
MSH6-215ENST00000622629 FUT8Q9BYC5 575 aa13.98□□□□□ -0.17
MSH6-215ENST00000622629 JMJD4Q9H9V9 463 aa13.98□□□□□ -0.17
MSH6-215ENST00000622629 ATP2A1O14983 1001 aa13.98□□□□□ -0.17
MSH6-215ENST00000622629 KCNA4P22459 653 aa13.98□□□□□ -0.17
MSH6-215ENST00000622629 CYP2C19P33261 490 aa13.98□□□□□ -0.17
MSH6-215ENST00000622629 HOOK2Q96ED9 719 aa13.98□□□□□ -0.17
MSH6-215ENST00000622629 CEP83Q9Y592 693 aa13.98□□□□□ -0.17
MSH6-215ENST00000622629 CAPN7Q9Y6W3 813 aa13.98□□□□□ -0.17
MSH6-215ENST00000622629 GOLGA8IPA6NC78 632 aa13.98□□□□□ -0.17
MSH6-215ENST00000622629 GOLGA8JA6NMD2 632 aa13.98□□□□□ -0.17
MSH6-215ENST00000622629 ACTN1P12814 892 aa13.98□□□□□ -0.17
MSH6-215ENST00000622629 ADRA2BP18089 450 aa13.98□□□□□ -0.17
MSH6-215ENST00000622629 DHX9Q08211 1270 aaKnown RBP13.98□□□□□ -0.17
MSH6-215ENST00000622629 IWS1Q96ST2 819 aa13.98□□□□□ -0.17
MSH6-215ENST00000622629 ECM2O94769 699 aaPredicted RBP13.97□□□□□ -0.17
MSH6-215ENST00000622629 SEMA3FQ13275 785 aa13.97□□□□□ -0.17
MSH6-215ENST00000622629 RCSD1Q6JBY9 416 aa13.97□□□□□ -0.17
MSH6-215ENST00000622629 POMGNT1Q8WZA1 660 aa13.97□□□□□ -0.17
MSH6-215ENST00000622629 DAAM1Q9Y4D1 1078 aa13.97□□□□□ -0.17
MSH6-215ENST00000622629 CYTH3O43739 400 aa13.97□□□□□ -0.17
MSH6-215ENST00000622629 NAALADL2Q58DX5 795 aa13.97□□□□□ -0.17
MSH6-215ENST00000622629 PODNQ7Z5L7 613 aa13.97□□□□□ -0.17
MSH6-215ENST00000622629 DCAF4Q8WV16 495 aa13.97□□□□□ -0.17
MSH6-215ENST00000622629 EHD2Q9NZN4 543 aa13.97□□□□□ -0.17
MSH6-215ENST00000622629 DNAJC12Q9UKB3 198 aa13.97□□□□□ -0.17
MSH6-215ENST00000622629 CNTNAP4Q9C0A0 1308 aa13.97□□□□□ -0.17
MSH6-215ENST00000622629 RNF10Q8N5U6 811 aaKnown RBP13.97□□□□□ -0.17
MSH6-215ENST00000622629 DYDC2Q96IM9 177 aa13.97□□□□□ -0.17
MSH6-215ENST00000622629 DDX47Q9H0S4 455 aaKnown RBP13.97□□□□□ -0.17
MSH6-215ENST00000622629 FGGP02679 453 aa13.96□□□□□ -0.17
MSH6-215ENST00000622629 EIF2AK2P19525 551 aaKnown RBP13.96□□□□□ -0.17
MSH6-215ENST00000622629 PPP1R18Q6NYC8 613 aa13.96□□□□□ -0.17
MSH6-215ENST00000622629 MASTLQ96GX5 879 aa13.96□□□□□ -0.17
MSH6-215ENST00000622629 NKIRAS1Q9NYS0 192 aa13.96□□□□□ -0.17
MSH6-215ENST00000622629 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.96□□□□□ -0.17
MSH6-215ENST00000622629 KIF1AQ12756 1690 aa13.96□□□□□ -0.17
MSH6-215ENST00000622629 MYO1CO00159 1063 aa13.96□□□□□ -0.17
MSH6-215ENST00000622629 PSMD14O00487 310 aa13.96□□□□□ -0.17
MSH6-215ENST00000622629 HNRNPDLO14979 420 aaKnown RBP13.96□□□□□ -0.17
MSH6-215ENST00000622629 TRIM49P0CI25 452 aa13.96□□□□□ -0.17
MSH6-215ENST00000622629 TRIM49CP0CI26 452 aa13.96□□□□□ -0.17
MSH6-215ENST00000622629 GRB10Q13322 594 aa13.96□□□□□ -0.17
MSH6-215ENST00000622629 LIN9Q5TKA1 542 aa13.96□□□□□ -0.17
MSH6-215ENST00000622629 DCUN1D2Q6PH85 259 aa13.96□□□□□ -0.17
MSH6-215ENST00000622629 PHLDB2Q86SQ0 1253 aa13.96□□□□□ -0.17
MSH6-215ENST00000622629 KSR1Q8IVT5 923 aa13.96□□□□□ -0.17
MSH6-215ENST00000622629 ANKRD42Q8N9B4 389 aa13.96□□□□□ -0.17
MSH6-215ENST00000622629 FBXO41Q8TF61 875 aa13.96□□□□□ -0.17
MSH6-215ENST00000622629 SH2D3AQ9BRG2 576 aa13.96□□□□□ -0.17
MSH6-215ENST00000622629 CDC42EP5Q6NZY7 148 aa13.96□□□□□ -0.17
MSH6-215ENST00000622629 CCDC91Q7Z6B0 441 aa13.96□□□□□ -0.17
MSH6-215ENST00000622629 SH3RF1Q7Z6J0 888 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms