RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 ERCC3P19447 782 aa10.39□□□□□ -0.75
PDPN-212ENST00000621990 NR2F2P24468 414 aa10.39□□□□□ -0.75
PDPN-212ENST00000621990 PABPC4Q13310 644 aaKnown RBP eCLIP10.39□□□□□ -0.75
PDPN-212ENST00000621990 SLC18A3Q16572 532 aa10.39□□□□□ -0.75
PDPN-212ENST00000621990 MAP9Q49MG5 647 aa10.39□□□□□ -0.75
PDPN-212ENST00000621990 SUPT20HQ8NEM7 779 aa10.39□□□□□ -0.75
PDPN-212ENST00000621990 EXOC4Q96A65 974 aa10.39□□□□□ -0.75
PDPN-212ENST00000621990 UIMC1Q96RL1 719 aa10.39□□□□□ -0.75
PDPN-212ENST00000621990 OSBPL9Q96SU4 736 aa10.39□□□□□ -0.75
PDPN-212ENST00000621990 HSD17B14Q9BPX1 270 aa10.39□□□□□ -0.75
PDPN-212ENST00000621990 OLFML3Q9NRN5 406 aa10.39□□□□□ -0.75
PDPN-212ENST00000621990 TMX2Q9Y320 296 aa10.39□□□□□ -0.75
PDPN-212ENST00000621990 LRRIQ3A6PVS8 624 aaPredicted RBP10.38□□□□□ -0.75
PDPN-212ENST00000621990 SLC16A3O15427 465 aaKnown RBP10.38□□□□□ -0.75
PDPN-212ENST00000621990 STAT2P52630 851 aa10.38□□□□□ -0.75
PDPN-212ENST00000621990 POLR2FP61218 127 aaKnown RBP10.38□□□□□ -0.75
PDPN-212ENST00000621990 KCNH2Q12809 1159 aa10.38□□□□□ -0.75
PDPN-212ENST00000621990 SFR1Q86XK3 245 aa10.38□□□□□ -0.75
PDPN-212ENST00000621990 COG1Q8WTW3 980 aa10.38□□□□□ -0.75
PDPN-212ENST00000621990 NOX5Q96PH1 765 aa10.38□□□□□ -0.75
PDPN-212ENST00000621990 TSKSQ9UJT2 592 aa10.38□□□□□ -0.75
PDPN-212ENST00000621990 FBXL5Q9UKA1 691 aa10.38□□□□□ -0.75
PDPN-212ENST00000621990 HYOU1Q9Y4L1 999 aa10.38□□□□□ -0.75
PDPN-212ENST00000621990 LOXHD1Q8IVV2 1947 aa10.38□□□□□ -0.75
PDPN-212ENST00000621990 ASTN1O14525 1302 aa10.38□□□□□ -0.75
PDPN-212ENST00000621990 ATP8B3O60423 1300 aa10.38□□□□□ -0.75
PDPN-212ENST00000621990 ZC3H4Q9UPT8 1303 aaKnown RBP10.38□□□□□ -0.75
PDPN-212ENST00000621990 SPDYE2BA6NHP3 402 aa10.38□□□□□ -0.75
PDPN-212ENST00000621990 BTNL10A8MVZ5 291 aa10.38□□□□□ -0.75
PDPN-212ENST00000621990 MEIS1O00470 390 aa10.38□□□□□ -0.75
PDPN-212ENST00000621990 CALUO43852 315 aaPredicted RBP10.38□□□□□ -0.75
PDPN-212ENST00000621990 PLA2G6O60733 806 aa10.38□□□□□ -0.75
PDPN-212ENST00000621990 SPDYE6P0CI01 402 aa10.38□□□□□ -0.75
PDPN-212ENST00000621990 MUTP22033 750 aa10.38□□□□□ -0.75
PDPN-212ENST00000621990 HOXA13P31271 388 aaPredicted RBP10.38□□□□□ -0.75
PDPN-212ENST00000621990 RAD51AP2Q09MP3 1159 aa10.38□□□□□ -0.75
PDPN-212ENST00000621990 PPP2R5CQ13362 524 aa10.38□□□□□ -0.75
PDPN-212ENST00000621990 NAB2Q15742 525 aa10.38□□□□□ -0.75
PDPN-212ENST00000621990 NFIL3Q16649 462 aa10.38□□□□□ -0.75
PDPN-212ENST00000621990 CYP2W1Q8TAV3 490 aa10.38□□□□□ -0.75
PDPN-212ENST00000621990 CAGE1Q8TC20 777 aa10.38□□□□□ -0.75
PDPN-212ENST00000621990 PKNOX2Q96KN3 472 aa10.38□□□□□ -0.75
PDPN-212ENST00000621990 EIF2AK1Q9BQI3 630 aaKnown RBP10.38□□□□□ -0.75
PDPN-212ENST00000621990 TLR10Q9BXR5 811 aa10.38□□□□□ -0.75
PDPN-212ENST00000621990 TUFT1Q9NNX1 390 aa10.38□□□□□ -0.75
PDPN-212ENST00000621990 MED4Q9NPJ6 270 aa10.38□□□□□ -0.75
PDPN-212ENST00000621990 NLRC4Q9NPP4 1024 aa10.38□□□□□ -0.75
PDPN-212ENST00000621990 TYW1Q9NV66 732 aaKnown RBP10.38□□□□□ -0.75
PDPN-212ENST00000621990 EML1O00423 815 aa10.37□□□□□ -0.75
PDPN-212ENST00000621990 PSMD10O75832 226 aa10.37□□□□□ -0.75
PDPN-212ENST00000621990 GAP43P17677 238 aa10.37□□□□□ -0.75
PDPN-212ENST00000621990 CHRNA5P30532 468 aa10.37□□□□□ -0.75
PDPN-212ENST00000621990 RASSF7Q02833 373 aa10.37□□□□□ -0.75
PDPN-212ENST00000621990 IKQ13123 557 aaPredicted RBP10.37□□□□□ -0.75
PDPN-212ENST00000621990 KIAA1755Q5JYT7 1200 aa10.37□□□□□ -0.75
PDPN-212ENST00000621990 KLHDC7AQ5VTJ3 777 aa10.37□□□□□ -0.75
PDPN-212ENST00000621990 CCNI2Q6ZMN8 369 aaPredicted RBP10.37□□□□□ -0.75
PDPN-212ENST00000621990 OTOP1Q7RTM1 612 aa10.37□□□□□ -0.75
PDPN-212ENST00000621990 SLC5A5Q92911 643 aa10.37□□□□□ -0.75
PDPN-212ENST00000621990 WDR18Q9BV38 432 aa10.37□□□□□ -0.75
PDPN-212ENST00000621990 RUSC1Q9BVN2 902 aa10.37□□□□□ -0.75
PDPN-212ENST00000621990 RANBP17Q9H2T7 1088 aaKnown RBP10.37□□□□□ -0.75
PDPN-212ENST00000621990 ARHGEF10LQ9HCE6 1279 aa10.37□□□□□ -0.75
PDPN-212ENST00000621990 LUC7LQ9NQ29 371 aaKnown RBP10.37□□□□□ -0.75
PDPN-212ENST00000621990 ARMCX3Q9UH62 379 aaPredicted RBP10.37□□□□□ -0.75
PDPN-212ENST00000621990 ADAM21Q9UKJ8 722 aa10.37□□□□□ -0.75
PDPN-212ENST00000621990 HDAC9Q9UKV0 1011 aa10.37□□□□□ -0.75
PDPN-212ENST00000621990 PCDHGC5Q9Y5F6 944 aa10.37□□□□□ -0.75
PDPN-212ENST00000621990 CNTNAP1P78357 1384 aa10.37□□□□□ -0.75
PDPN-212ENST00000621990 EIF3DO15371 548 aaKnown RBP eCLIP10.37□□□□□ -0.75
PDPN-212ENST00000621990 MYBP10242 640 aa10.37□□□□□ -0.75
PDPN-212ENST00000621990 TAL1P17542 331 aaPredicted RBP10.37□□□□□ -0.75
PDPN-212ENST00000621990 ANXA13P27216 316 aa10.37□□□□□ -0.75
PDPN-212ENST00000621990 ECE1P42892 770 aa10.37□□□□□ -0.75
PDPN-212ENST00000621990 GRIPAP1Q4V328 841 aa10.37□□□□□ -0.75
PDPN-212ENST00000621990 SPATA4Q8NEY3 305 aa10.37□□□□□ -0.75
PDPN-212ENST00000621990 FAM71BQ8TC56 605 aa10.37□□□□□ -0.75
PDPN-212ENST00000621990 BORCS6Q96GS4 357 aa10.37□□□□□ -0.75
PDPN-212ENST00000621990 GMLQ99445 158 aa10.37□□□□□ -0.75
PDPN-212ENST00000621990 CRACR2AQ9BSW2 395 aa10.37□□□□□ -0.75
PDPN-212ENST00000621990 DEFB129Q9H1M3 183 aa10.37□□□□□ -0.75
PDPN-212ENST00000621990 BHMT2Q9H2M3 363 aa10.37□□□□□ -0.75
PDPN-212ENST00000621990 ACBD3Q9H3P7 528 aa10.37□□□□□ -0.75
PDPN-212ENST00000621990 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.37□□□□□ -0.75
PDPN-212ENST00000621990 GOPCQ9HD26 462 aa10.37□□□□□ -0.75
PDPN-212ENST00000621990 RABGAP1Q9Y3P9 1069 aa10.37□□□□□ -0.75
PDPN-212ENST00000621990 GTPBP10A4D1E9 387 aaKnown RBP10.36□□□□□ -0.75
PDPN-212ENST00000621990 AKAP3O75969 853 aa10.36□□□□□ -0.75
PDPN-212ENST00000621990 AFPP02771 609 aaKnown RBP10.36□□□□□ -0.75
PDPN-212ENST00000621990 APBA1Q02410 837 aa10.36□□□□□ -0.75
PDPN-212ENST00000621990 C2orf54Q08AI8 447 aa10.36□□□□□ -0.75
PDPN-212ENST00000621990 EPHA7Q15375 998 aa10.36□□□□□ -0.75
PDPN-212ENST00000621990 TDRD12Q587J7 1177 aaKnown RBP10.36□□□□□ -0.75
PDPN-212ENST00000621990 C10orf76Q5T2E6 689 aa10.36□□□□□ -0.75
PDPN-212ENST00000621990 TAF3Q5VWG9 929 aa10.36□□□□□ -0.75
PDPN-212ENST00000621990 RINT1Q6NUQ1 792 aa10.36□□□□□ -0.75
PDPN-212ENST00000621990 NFRKBQ6P4R8 1299 aa10.36□□□□□ -0.75
PDPN-212ENST00000621990 IRF2BP2Q7Z5L9 587 aa10.36□□□□□ -0.75
PDPN-212ENST00000621990 FAM151AQ8WW52 585 aa10.36□□□□□ -0.75
PDPN-212ENST00000621990 METTL14Q9HCE5 456 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms