RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 USH1GQ495M9 461 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 TUBA3EQ6PEY2 450 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 NUDCD3Q8IVD9 361 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 SNX29Q8TEQ0 813 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 EPB41L4AQ9HCS5 686 aaPredicted RBP3.33□□□□□ -1.88
NEB-220ENST00000618972 CHMP2BQ9UQN3 213 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 RASGRF2O14827 1237 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 AKAP4Q5JQC9 854 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 PDZD4Q76G19 769 aaPredicted RBP3.32□□□□□ -1.88
NEB-220ENST00000618972 C2CD5Q86YS7 1000 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 RNPC3Q96LT9 517 aaKnown RBP3.32□□□□□ -1.88
NEB-220ENST00000618972 KLHL2O95198 593 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 CASP8Q14790 479 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 NTRK3Q16288 839 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 RAD21L1Q9H4I0 556 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 NFU1Q9UMS0 254 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 SH2B2O14492 632 aaPredicted RBP3.32□□□□□ -1.88
NEB-220ENST00000618972 GNAT2P19087 354 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 TMEM259Q4ZIN3 620 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 NFRKBQ6P4R8 1299 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 WDR59Q6PJI9 974 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 SLC24A3Q9HC58 644 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 AASDHPPTQ9NRN7 309 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 SLAIN2Q9P270 581 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 SUGT1Q9Y2Z0 365 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 MRFAP1Q9Y605 127 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 POTEMA6NI47 508 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 DAB1O75553 588 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 LDHCP07864 332 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 EPS8Q12929 822 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 PPP2R5DQ14738 602 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 POTEHQ6S545 545 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 POTEGQ6S5H5 508 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 EPN3Q9H201 632 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 C19orf44Q9H6X5 657 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 RGS16O15492 202 aaPredicted RBP3.32□□□□□ -1.88
NEB-220ENST00000618972 MRPL12P52815 198 aaKnown RBP3.32□□□□□ -1.88
NEB-220ENST00000618972 GALNT17Q6IS24 598 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 PLBD2Q8NHP8 589 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 MBD2Q9UBB5 411 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 ATP11BQ9Y2G3 1177 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 SNX24Q9Y343 169 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 ZNF263O14978 683 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 NSFP46459 744 aaKnown RBP3.32□□□□□ -1.88
NEB-220ENST00000618972 MFSD6Q6ZSS7 791 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 EFCAB3Q8N7B9 438 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 SIRT1Q96EB6 747 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 PANX2Q96RD6 677 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 EPS8L2Q9H6S3 715 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 PCSK1NQ9UHG2 260 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 PIK3R4Q99570 1358 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 CRB1P82279 1406 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 GPC4O75487 556 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 RBM5P52756 815 aaKnown RBP eCLIP3.32□□□□□ -1.88
NEB-220ENST00000618972 ASIC2Q16515 512 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 DHTKD1Q96HY7 919 aaPredicted RBP3.32□□□□□ -1.88
NEB-220ENST00000618972 ELAC2Q9BQ52 826 aaKnown RBP3.32□□□□□ -1.88
NEB-220ENST00000618972 INF2Q27J81 1249 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 PRR23BQ6ZRT6 265 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 CIDEBQ9UHD4 219 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 NPC1L1Q9UHC9 1359 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 GLI1P08151 1106 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 GUCY2DQ02846 1103 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 LY9Q9HBG7 655 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 ANKIB1Q9P2G1 1089 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 GOLGA8IPA6NC78 632 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 RPL17P18621 184 aaKnown RBP3.32□□□□□ -1.88
NEB-220ENST00000618972 SLCO1A2P46721 670 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 ATAD3BQ5T9A4 648 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 PPP1R18Q6NYC8 613 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 KIF2BQ8N4N8 673 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 U2AF1L4Q8WU68 220 aaKnown RBP3.32□□□□□ -1.88
NEB-220ENST00000618972 ROPN1BQ9BZX4 212 aaPredicted RBP3.32□□□□□ -1.88
NEB-220ENST00000618972 ROPN1Q9HAT0 212 aaPredicted RBP3.32□□□□□ -1.88
NEB-220ENST00000618972 A2MP01023 1474 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 TMTC3Q6ZXV5 915 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 APTXQ7Z2E3 356 aaKnown RBP3.32□□□□□ -1.88
NEB-220ENST00000618972 SPICE1Q8N0Z3 855 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 GRK7Q8WTQ7 553 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 CASKIN2Q8WXE0 1202 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 C12orf65Q9H3J6 166 aaKnown RBP3.32□□□□□ -1.88
NEB-220ENST00000618972 ATP8A1Q9Y2Q0 1164 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 GOLGA8CPA6NN73 597 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 KCNJ18B7U540 433 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 PSMC6P62333 389 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 KCNJ12Q14500 433 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 FAM133BQ5BKY9 247 aaKnown RBP3.32□□□□□ -1.88
NEB-220ENST00000618972 TADA2BQ86TJ2 420 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 ARHGEF2Q92974 986 aaKnown RBP3.32□□□□□ -1.88
NEB-220ENST00000618972 TBATAQ96M53 351 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 AP3B1O00203 1094 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 ADGRA1Q86SQ6 560 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 ZNF483Q8TF39 744 aaPredicted RBP3.32□□□□□ -1.88
NEB-220ENST00000618972 RNF19AQ9NV58 838 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 STK4Q13043 487 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 TGFBRAP1Q8WUH2 860 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 USP17L5A8MUK1 530 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 CLIC2O15247 247 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 KRT7P08729 469 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 INPP1P49441 399 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms