RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 ALDH3A1P30838 453 aa15.11■□□□□ 0.01
CNOT3-210ENST00000618939 KLRC3Q07444 240 aa15.11■□□□□ 0.01
CNOT3-210ENST00000618939 KRT27Q7Z3Y8 459 aa15.11■□□□□ 0.01
CNOT3-210ENST00000618939 HOMER3Q9NSC5 361 aa15.11■□□□□ 0.01
CNOT3-210ENST00000618939 AKAP12Q02952 1782 aa15.11■□□□□ 0.01
CNOT3-210ENST00000618939 NOP56O00567 594 aaKnown RBP15.11■□□□□ 0.01
CNOT3-210ENST00000618939 CALRP27797 417 aaKnown RBP15.11■□□□□ 0.01
CNOT3-210ENST00000618939 MXI1P50539 228 aa15.11■□□□□ 0.01
CNOT3-210ENST00000618939 C6orf163Q5TEZ5 329 aa15.11■□□□□ 0.01
CNOT3-210ENST00000618939 GKAP1Q5VSY0 366 aaPredicted RBP15.11■□□□□ 0.01
CNOT3-210ENST00000618939 UBE2TQ9NPD8 197 aaPredicted RBP15.11■□□□□ 0.01
CNOT3-210ENST00000618939 PNMA2Q9UL42 364 aa15.11■□□□□ 0.01
CNOT3-210ENST00000618939 GBP1P32455 592 aa15.11■□□□□ 0.01
CNOT3-210ENST00000618939 USP11P51784 963 aa15.11■□□□□ 0.01
CNOT3-210ENST00000618939 DHX9Q08211 1270 aaKnown RBP15.11■□□□□ 0.01
CNOT3-210ENST00000618939 UAP1Q16222 522 aaPredicted RBP15.11■□□□□ 0.01
CNOT3-210ENST00000618939 PRR5LQ6MZQ0 368 aa15.11■□□□□ 0.01
CNOT3-210ENST00000618939 MGARPQ8TDB4 240 aa15.11■□□□□ 0.01
CNOT3-210ENST00000618939 ZNF653Q96CK0 615 aa15.11■□□□□ 0.01
CNOT3-210ENST00000618939 AZI2Q9H6S1 392 aa15.11■□□□□ 0.01
CNOT3-210ENST00000618939 ATP8A1Q9Y2Q0 1164 aa15.11■□□□□ 0.01
CNOT3-210ENST00000618939 PASKQ96RG2 1323 aa15.11■□□□□ 0.01
CNOT3-210ENST00000618939 H0YCG3 227 aa15.11■□□□□ 0.01
CNOT3-210ENST00000618939 HGSO14964 777 aaPredicted RBP15.11■□□□□ 0.01
CNOT3-210ENST00000618939 GGCXP38435 758 aa15.11■□□□□ 0.01
CNOT3-210ENST00000618939 CCDC6Q16204 474 aa15.11■□□□□ 0.01
CNOT3-210ENST00000618939 SNX12Q9UMY4 172 aa15.11■□□□□ 0.01
CNOT3-210ENST00000618939 DCAF8L1A6NGE4 600 aa15.1■□□□□ 0.01
CNOT3-210ENST00000618939 PDHBP11177 359 aa15.1■□□□□ 0.01
CNOT3-210ENST00000618939 PLTPP55058 493 aa15.1■□□□□ 0.01
CNOT3-210ENST00000618939 ANKRD42Q8N9B4 389 aa15.1■□□□□ 0.01
CNOT3-210ENST00000618939 TDRD3Q9H7E2 651 aaKnown RBP15.1■□□□□ 0.01
CNOT3-210ENST00000618939 TYW1Q9NV66 732 aaKnown RBP15.1■□□□□ 0.01
CNOT3-210ENST00000618939 MAD2L2Q9UI95 211 aa15.1■□□□□ 0.01
CNOT3-210ENST00000618939 CNTNAP4Q9C0A0 1308 aa15.1■□□□□ 0.01
CNOT3-210ENST00000618939 CCDC188H7C350 402 aa15.1■□□□□ 0.01
CNOT3-210ENST00000618939 ADCY8P40145 1251 aa15.1■□□□□ 0.01
CNOT3-210ENST00000618939 LRP10Q7Z4F1 713 aa15.1■□□□□ 0.01
CNOT3-210ENST00000618939 SPATA4Q8NEY3 305 aa15.1■□□□□ 0.01
CNOT3-210ENST00000618939 COG1Q8WTW3 980 aa15.1■□□□□ 0.01
CNOT3-210ENST00000618939 RAD17O75943 681 aa15.1■□□□□ 0.01
CNOT3-210ENST00000618939 H2AFXP16104 143 aaPredicted RBP15.1■□□□□ 0.01
CNOT3-210ENST00000618939 NSFP46459 744 aaKnown RBP15.1■□□□□ 0.01
CNOT3-210ENST00000618939 FAM160B2Q86V87 743 aa15.1■□□□□ 0.01
CNOT3-210ENST00000618939 CDAN1Q8IWY9 1227 aa15.1■□□□□ 0.01
CNOT3-210ENST00000618939 DNAJC12Q9UKB3 198 aa15.1■□□□□ 0.01
CNOT3-210ENST00000618939 SUGT1Q9Y2Z0 365 aa15.1■□□□□ 0.01
CNOT3-210ENST00000618939 TARSL2A2RTX5 802 aaKnown RBP15.09■□□□□ 0.01
CNOT3-210ENST00000618939 KRT15P19012 456 aa15.09■□□□□ 0.01
CNOT3-210ENST00000618939 PPP4CP60510 307 aa15.09■□□□□ 0.01
CNOT3-210ENST00000618939 LACTBP83111 547 aaPredicted RBP15.09■□□□□ 0.01
CNOT3-210ENST00000618939 PRKG1Q13976 671 aa15.09■□□□□ 0.01
CNOT3-210ENST00000618939 CDKAL1Q5VV42 579 aa15.09■□□□□ 0.01
CNOT3-210ENST00000618939 DAGLBQ8NCG7 672 aa15.09■□□□□ 0.01
CNOT3-210ENST00000618939 SLC17A8Q8NDX2 589 aa15.09■□□□□ 0.01
CNOT3-210ENST00000618939 GRK7Q8WTQ7 553 aa15.09■□□□□ 0.01
CNOT3-210ENST00000618939 CACNA1FO60840 1977 aa15.09■□□□□ 0.01
CNOT3-210ENST00000618939 MYO1FO00160 1098 aa15.09■□□□□ 0.01
CNOT3-210ENST00000618939 NR1D1P20393 614 aa15.09■□□□□ 0.01
CNOT3-210ENST00000618939 PTK2Q05397 1052 aa15.09■□□□□ 0.01
CNOT3-210ENST00000618939 PNMA8AQ86V59 439 aaPredicted RBP15.09■□□□□ 0.01
CNOT3-210ENST00000618939 SP8Q8IXZ3 490 aa15.09■□□□□ 0.01
CNOT3-210ENST00000618939 TRIM7Q9C029 511 aa15.09■□□□□ 0.01
CNOT3-210ENST00000618939 BCL9O00512 1426 aa15.09■□□□□ 0.01
CNOT3-210ENST00000618939 SORBS3O60504 671 aa15.09■□□□□ 0.01
CNOT3-210ENST00000618939 SARSP49591 514 aaKnown RBP15.09■□□□□ 0.01
CNOT3-210ENST00000618939 EARS2Q5JPH6 523 aaKnown RBP15.09■□□□□ 0.01
CNOT3-210ENST00000618939 NBPF3Q9H094 633 aa15.09■□□□□ 0.01
CNOT3-210ENST00000618939 BAZ2BQ9UIF8 2168 aaKnown RBP15.09■□□□□ 0.01
CNOT3-210ENST00000618939 ZNF185O15231 689 aa15.09■□□□□ 0.01
CNOT3-210ENST00000618939 TBC1D8O95759 1140 aa15.09■□□□□ 0.01
CNOT3-210ENST00000618939 IFNB1P01574 187 aa15.09■□□□□ 0.01
CNOT3-210ENST00000618939 HSPA6P17066 643 aa15.09■□□□□ 0.01
CNOT3-210ENST00000618939 ERVK-24P63145 666 aa15.09■□□□□ 0.01
CNOT3-210ENST00000618939 CUL1Q13616 776 aa15.09■□□□□ 0.01
CNOT3-210ENST00000618939 ATP6V0A1Q93050 837 aa15.09■□□□□ 0.01
CNOT3-210ENST00000618939 AS3MTQ9HBK9 375 aa15.09■□□□□ 0.01
CNOT3-210ENST00000618939 PTPN22Q9Y2R2 807 aa15.09■□□□□ 0.01
CNOT3-210ENST00000618939 SLC10A5Q5PT55 438 aa15.08■□□□□ 0.01
CNOT3-210ENST00000618939 PDXDC2PQ6P474 469 aa15.08■□□□□ 0.01
CNOT3-210ENST00000618939 BARGINQ6ZT62 677 aa15.08■□□□□ 0.01
CNOT3-210ENST00000618939 MIGA2Q7L4E1 593 aa15.08■□□□□ 0.01
CNOT3-210ENST00000618939 CCDC63Q8NA47 563 aa15.08■□□□□ 0.01
CNOT3-210ENST00000618939 RUNDC3BQ96NL0 473 aa15.08■□□□□ 0.01
CNOT3-210ENST00000618939 SPATA31A5Q5VU36 1347 aa15.08■□□□□ 0
CNOT3-210ENST00000618939 SPATA31A7Q8IWB4 1347 aa15.08■□□□□ 0
CNOT3-210ENST00000618939 GPR75-ASB3A0A0A6YYF3 556 aa15.08■□□□□ 0
CNOT3-210ENST00000618939 ESYT3A0FGR9 886 aa15.08■□□□□ 0
CNOT3-210ENST00000618939 PSMD14O00487 310 aa15.08■□□□□ 0
CNOT3-210ENST00000618939 FGGP02679 453 aa15.08■□□□□ 0
CNOT3-210ENST00000618939 STX2P32856 288 aa15.08■□□□□ 0
CNOT3-210ENST00000618939 NOA1Q8NC60 698 aaKnown RBP15.08■□□□□ 0
CNOT3-210ENST00000618939 KMT5AQ9NQR1 393 aa15.08■□□□□ 0
CNOT3-210ENST00000618939 ESYT2A0FGR8 921 aa15.08■□□□□ 0
CNOT3-210ENST00000618939 PALM3A6NDB9 673 aaPredicted RBP15.08■□□□□ 0
CNOT3-210ENST00000618939 LRRIQ4A6NIV6 560 aa15.08■□□□□ 0
CNOT3-210ENST00000618939 KRT19P08727 400 aa15.08■□□□□ 0
CNOT3-210ENST00000618939 SMARCA1P28370 1054 aa15.08■□□□□ 0
CNOT3-210ENST00000618939 LLGL1Q15334 1064 aa15.08■□□□□ 0
CNOT3-210ENST00000618939 NT5DC1Q5TFE4 455 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms