RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.91□□□□□ -0.5
POLR2A-209ENST00000617998 EGFRP00533 1210 aa11.91□□□□□ -0.5
POLR2A-209ENST00000617998 PRELPP51888 382 aa11.91□□□□□ -0.5
POLR2A-209ENST00000617998 PPM1KQ8N3J5 372 aa11.91□□□□□ -0.5
POLR2A-209ENST00000617998 APPL2Q8NEU8 664 aa11.91□□□□□ -0.5
POLR2A-209ENST00000617998 MRPL4Q9BYD3 311 aaKnown RBP11.91□□□□□ -0.5
POLR2A-209ENST00000617998 NYAP2Q9P242 653 aa11.91□□□□□ -0.5
POLR2A-209ENST00000617998 A0A0D9SFI3 127 aa11.91□□□□□ -0.5
POLR2A-209ENST00000617998 HLTFQ14527 1009 aaKnown RBP eCLIP11.91□□□□□ -0.5
POLR2A-209ENST00000617998 KCNB1Q14721 858 aa11.91□□□□□ -0.5
POLR2A-209ENST00000617998 NOLC1Q14978 699 aaKnown RBP eCLIP11.91□□□□□ -0.5
POLR2A-209ENST00000617998 HADHQ16836 314 aaKnown RBP11.91□□□□□ -0.5
POLR2A-209ENST00000617998 ARL13BQ3SXY8 428 aa11.91□□□□□ -0.5
POLR2A-209ENST00000617998 FBXO16Q8IX29 292 aaPredicted RBP11.91□□□□□ -0.5
POLR2A-209ENST00000617998 DCP1BQ8IZD4 617 aaKnown RBP11.91□□□□□ -0.5
POLR2A-209ENST00000617998 ACAP3Q96P50 834 aa11.91□□□□□ -0.5
POLR2A-209ENST00000617998 FZD1Q9UP38 647 aa11.91□□□□□ -0.5
POLR2A-209ENST00000617998 ZMYM6O95789 1325 aa11.91□□□□□ -0.5
POLR2A-209ENST00000617998 ZSCAN12O43309 604 aa11.91□□□□□ -0.5
POLR2A-209ENST00000617998 HBP1O60381 514 aa11.91□□□□□ -0.5
POLR2A-209ENST00000617998 MAP2K5Q13163 448 aa11.91□□□□□ -0.5
POLR2A-209ENST00000617998 RNF149Q8NC42 400 aa11.91□□□□□ -0.5
POLR2A-209ENST00000617998 KIF12Q96FN5 646 aa11.91□□□□□ -0.5
POLR2A-209ENST00000617998 MED7O43513 233 aa11.91□□□□□ -0.5
POLR2A-209ENST00000617998 XRCC5P13010 732 aaKnown RBP11.91□□□□□ -0.5
POLR2A-209ENST00000617998 SYN1P17600 705 aa11.91□□□□□ -0.5
POLR2A-209ENST00000617998 PTGS1P23219 599 aa11.91□□□□□ -0.5
POLR2A-209ENST00000617998 CTNND2Q9UQB3 1225 aa11.91□□□□□ -0.5
POLR2A-209ENST00000617998 SPHKAPQ2M3C7 1700 aa11.91□□□□□ -0.5
POLR2A-209ENST00000617998 SLC15A5A6NIM6 579 aa11.91□□□□□ -0.5
POLR2A-209ENST00000617998 IGSF3O75054 1194 aa11.91□□□□□ -0.5
POLR2A-209ENST00000617998 EFCAB14O75071 495 aa11.91□□□□□ -0.5
POLR2A-209ENST00000617998 IFNAR2P48551 515 aa11.91□□□□□ -0.5
POLR2A-209ENST00000617998 USP17L6PQ6QN14 398 aa11.91□□□□□ -0.5
POLR2A-209ENST00000617998 GJA10Q969M2 543 aa11.91□□□□□ -0.5
POLR2A-209ENST00000617998 NSUN4Q96CB9 384 aaKnown RBP11.91□□□□□ -0.5
POLR2A-209ENST00000617998 P2RX7Q99572 595 aaKnown RBP11.91□□□□□ -0.5
POLR2A-209ENST00000617998 AKAP7Q9P0M2 348 aaPredicted RBP11.91□□□□□ -0.5
POLR2A-209ENST00000617998 HCN4Q9Y3Q4 1203 aa11.91□□□□□ -0.5
POLR2A-209ENST00000617998 BCORL1Q5H9F3 1711 aa11.9□□□□□ -0.5
POLR2A-209ENST00000617998 SPTLC1O15269 473 aa11.9□□□□□ -0.5
POLR2A-209ENST00000617998 ADCY1Q08828 1119 aa11.9□□□□□ -0.5
POLR2A-209ENST00000617998 MKRN4PQ13434 485 aaPredicted RBP11.9□□□□□ -0.5
POLR2A-209ENST00000617998 CCDC183Q5T5S1 534 aa11.9□□□□□ -0.5
POLR2A-209ENST00000617998 SCARA5Q6ZMJ2 495 aa11.9□□□□□ -0.5
POLR2A-209ENST00000617998 ADGRF4Q8IZF3 695 aa11.9□□□□□ -0.5
POLR2A-209ENST00000617998 FAN1Q9Y2M0 1017 aa11.9□□□□□ -0.5
POLR2A-209ENST00000617998 RNF8O76064 485 aa11.9□□□□□ -0.5
POLR2A-209ENST00000617998 HSPA4P34932 840 aa11.9□□□□□ -0.5
POLR2A-209ENST00000617998 RAB30Q15771 203 aa11.9□□□□□ -0.5
POLR2A-209ENST00000617998 ZNF667Q5HYK9 610 aa11.9□□□□□ -0.5
POLR2A-209ENST00000617998 SEL1L2Q5TEA6 688 aa11.9□□□□□ -0.5
POLR2A-209ENST00000617998 IQGAP3Q86VI3 1631 aa11.9□□□□□ -0.5
POLR2A-209ENST00000617998 FBXO22Q8NEZ5 403 aa11.9□□□□□ -0.5
POLR2A-209ENST00000617998 MRPS31Q92665 395 aaKnown RBP11.9□□□□□ -0.5
POLR2A-209ENST00000617998 IFT122Q9HBG6 1241 aa11.9□□□□□ -0.5
POLR2A-209ENST00000617998 PFDN4Q9NQP4 134 aa11.9□□□□□ -0.5
POLR2A-209ENST00000617998 ZC3H4Q9UPT8 1303 aaKnown RBP11.9□□□□□ -0.5
POLR2A-209ENST00000617998 PSMC5P62195 406 aa11.9□□□□□ -0.5
POLR2A-209ENST00000617998 SPECC1Q5M775 1068 aa11.9□□□□□ -0.5
POLR2A-209ENST00000617998 BSPRYQ5W0U4 402 aa11.9□□□□□ -0.5
POLR2A-209ENST00000617998 PLA2G12BQ9BX93 195 aa11.9□□□□□ -0.5
POLR2A-209ENST00000617998 LMTK2Q8IWU2 1503 aa11.9□□□□□ -0.5
POLR2A-209ENST00000617998 SYNCRIPO60506 623 aaKnown RBP11.9□□□□□ -0.5
POLR2A-209ENST00000617998 NASPP49321 788 aaPredicted RBP11.9□□□□□ -0.5
POLR2A-209ENST00000617998 CCDC42Q96M95 316 aa11.9□□□□□ -0.5
POLR2A-209ENST00000617998 ADD1P35611 737 aaKnown RBP11.9□□□□□ -0.51
POLR2A-209ENST00000617998 PRPSAP1Q14558 356 aa11.9□□□□□ -0.51
POLR2A-209ENST00000617998 ZNF541Q9H0D2 1346 aa11.89□□□□□ -0.51
POLR2A-209ENST00000617998 TTLL13PA6NNM8 815 aa11.89□□□□□ -0.51
POLR2A-209ENST00000617998 SGSM2O43147 1006 aa11.89□□□□□ -0.51
POLR2A-209ENST00000617998 ALDH2P05091 517 aa11.89□□□□□ -0.51
POLR2A-209ENST00000617998 VIL1P09327 827 aaKnown RBP11.89□□□□□ -0.51
POLR2A-209ENST00000617998 ERCC5P28715 1186 aaPredicted RBP11.89□□□□□ -0.51
POLR2A-209ENST00000617998 QARSP47897 775 aaKnown RBP11.89□□□□□ -0.51
POLR2A-209ENST00000617998 ASIC2Q16515 512 aa11.89□□□□□ -0.51
POLR2A-209ENST00000617998 CCDC122Q5T0U0 273 aa11.89□□□□□ -0.51
POLR2A-209ENST00000617998 ARNTL2Q8WYA1 636 aa11.89□□□□□ -0.51
POLR2A-209ENST00000617998 POLR3FQ9H1D9 316 aaPredicted RBP11.89□□□□□ -0.51
POLR2A-209ENST00000617998 GDPD2Q9HCC8 539 aa11.89□□□□□ -0.51
POLR2A-209ENST00000617998 CDC42BPBQ9Y5S2 1711 aa11.89□□□□□ -0.51
POLR2A-209ENST00000617998 IPO5O00410 1097 aaKnown RBP11.89□□□□□ -0.51
POLR2A-209ENST00000617998 POLR2DO15514 142 aaKnown RBP11.89□□□□□ -0.51
POLR2A-209ENST00000617998 GNA14O95837 355 aa11.89□□□□□ -0.51
POLR2A-209ENST00000617998 HOXC6P09630 235 aa11.89□□□□□ -0.51
POLR2A-209ENST00000617998 RLBP1P12271 317 aa11.89□□□□□ -0.51
POLR2A-209ENST00000617998 CASC4Q6P4E1 433 aa11.89□□□□□ -0.51
POLR2A-209ENST00000617998 CERS4Q9HA82 394 aa11.89□□□□□ -0.51
POLR2A-209ENST00000617998 IKBKBO14920 756 aa11.89□□□□□ -0.51
POLR2A-209ENST00000617998 RNASEH1O60930 286 aaKnown RBP11.89□□□□□ -0.51
POLR2A-209ENST00000617998 ACVR2BQ13705 512 aa11.89□□□□□ -0.51
POLR2A-209ENST00000617998 SPRYD7Q5W111 196 aa11.89□□□□□ -0.51
POLR2A-209ENST00000617998 LLGL2Q6P1M3 1020 aa11.89□□□□□ -0.51
POLR2A-209ENST00000617998 OTUD7AQ8TE49 926 aaPredicted RBP11.89□□□□□ -0.51
POLR2A-209ENST00000617998 PCIF1Q9H4Z3 704 aa11.89□□□□□ -0.51
POLR2A-209ENST00000617998 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.89□□□□□ -0.51
POLR2A-209ENST00000617998 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.89□□□□□ -0.51
POLR2A-209ENST00000617998 GPC3P51654 580 aa11.89□□□□□ -0.51
POLR2A-209ENST00000617998 SLC12A2P55011 1212 aa11.89□□□□□ -0.51
POLR2A-209ENST00000617998 PPANQ9NQ55 473 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms