RNA–Protein interactions for RNA: ENST00000617962.1

GADD45A-205, Transcript of growth arrest and DNA damage inducible alpha, humanhuman

TSL 1 (best) BASIC

Gene GADD45A, Length 1,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45A-205ENST00000617962 hCG_1642624A0A1W2PR95 340 aa28.14■■■□□ 2.1
GADD45A-205ENST00000617962 SH2B2O14492 632 aaPredicted RBP28.14■■■□□ 2.1
GADD45A-205ENST00000617962 IGBP1P78318 339 aa28.14■■■□□ 2.1
GADD45A-205ENST00000617962 TMTC2Q8N394 836 aa28.14■■■□□ 2.1
GADD45A-205ENST00000617962 LMAN2LQ9H0V9 348 aa28.14■■■□□ 2.1
GADD45A-205ENST00000617962 MCM5P33992 734 aa28.13■■■□□ 2.09
GADD45A-205ENST00000617962 COL9A3Q14050 684 aaPredicted RBP28.13■■■□□ 2.09
GADD45A-205ENST00000617962 TSHZ1Q6ZSZ6 1077 aa28.13■■■□□ 2.09
GADD45A-205ENST00000617962 RAB11FIP4Q86YS3 637 aa28.13■■■□□ 2.09
GADD45A-205ENST00000617962 CLP1Q92989 425 aaKnown RBP28.13■■■□□ 2.09
GADD45A-205ENST00000617962 ZBTB10Q96DT7 871 aa28.13■■■□□ 2.09
GADD45A-205ENST00000617962 TMEM87BQ96K49 555 aa28.13■■■□□ 2.09
GADD45A-205ENST00000617962 SPDYE3A6NKU9 549 aa28.12■■■□□ 2.09
GADD45A-205ENST00000617962 NCK2O43639 380 aa28.12■■■□□ 2.09
GADD45A-205ENST00000617962 LTBRP36941 435 aa28.12■■■□□ 2.09
GADD45A-205ENST00000617962 MRPS6P82932 125 aaKnown RBP28.12■■■□□ 2.09
GADD45A-205ENST00000617962 ZP2Q05996 745 aa28.12■■■□□ 2.09
GADD45A-205ENST00000617962 BTG3Q14201 252 aaPredicted RBP28.12■■■□□ 2.09
GADD45A-205ENST00000617962 CCDC82Q8N4S0 544 aa28.12■■■□□ 2.09
GADD45A-205ENST00000617962 ZNF689Q96CS4 500 aaPredicted RBP28.12■■■□□ 2.09
GADD45A-205ENST00000617962 UIMC1Q96RL1 719 aa28.12■■■□□ 2.09
GADD45A-205ENST00000617962 JADE2Q9NQC1 790 aa28.12■■■□□ 2.09
GADD45A-205ENST00000617962 PRKAG3Q9UGI9 489 aa28.12■■■□□ 2.09
GADD45A-205ENST00000617962 CSPG5O95196 566 aa28.11■■■□□ 2.09
GADD45A-205ENST00000617962 CALM1P0DP23 149 aa28.11■■■□□ 2.09
GADD45A-205ENST00000617962 CALM2P0DP24 149 aa28.11■■■□□ 2.09
GADD45A-205ENST00000617962 CALM3P0DP25 149 aa28.11■■■□□ 2.09
GADD45A-205ENST00000617962 HYAL1Q12794 435 aa28.11■■■□□ 2.09
GADD45A-205ENST00000617962 FAM49AQ9H0Q0 323 aaPredicted RBP28.11■■■□□ 2.09
GADD45A-205ENST00000617962 AGO3Q9H9G7 860 aaKnown RBP28.11■■■□□ 2.09
GADD45A-205ENST00000617962 PCDHA6Q9UN73 950 aa28.11■■■□□ 2.09
GADD45A-205ENST00000617962 PCDHA8Q9Y5H6 950 aa28.11■■■□□ 2.09
GADD45A-205ENST00000617962 TTC3P53804 2025 aa28.1■■■□□ 2.09
GADD45A-205ENST00000617962 POTEB3A0JP26 581 aa28.1■■■□□ 2.09
GADD45A-205ENST00000617962 DCXO43602 365 aa28.1■■■□□ 2.09
GADD45A-205ENST00000617962 DGKIO75912 1065 aa28.1■■■□□ 2.09
GADD45A-205ENST00000617962 INSRRP14616 1297 aa28.1■■■□□ 2.09
GADD45A-205ENST00000617962 CD52P31358 61 aa28.1■■■□□ 2.09
GADD45A-205ENST00000617962 CLUL1Q15846 466 aa28.1■■■□□ 2.09
GADD45A-205ENST00000617962 CTC1Q2NKJ3 1217 aa28.1■■■□□ 2.09
GADD45A-205ENST00000617962 POTEBQ6S5H4 581 aa28.1■■■□□ 2.09
GADD45A-205ENST00000617962 LINC01599Q8WXQ3 324 aa28.1■■■□□ 2.09
GADD45A-205ENST00000617962 PCYT2Q99447 389 aa28.1■■■□□ 2.09
GADD45A-205ENST00000617962 C5orf42Q9H799 3197 aa28.09■■■□□ 2.09
GADD45A-205ENST00000617962 RRN3P2A6NIE6 340 aa28.09■■■□□ 2.09
GADD45A-205ENST00000617962 MAFGO15525 162 aa28.09■■■□□ 2.09
GADD45A-205ENST00000617962 LIFRP42702 1097 aa28.09■■■□□ 2.09
GADD45A-205ENST00000617962 DLX2Q07687 328 aaPredicted RBP28.09■■■□□ 2.09
GADD45A-205ENST00000617962 CSPP1Q1MSJ5 1256 aa28.09■■■□□ 2.09
GADD45A-205ENST00000617962 HEATR3Q7Z4Q2 680 aa28.09■■■□□ 2.09
GADD45A-205ENST00000617962 ADHFE1Q8IWW8 467 aa28.09■■■□□ 2.09
GADD45A-205ENST00000617962 JPH1Q9HDC5 661 aaPredicted RBP28.09■■■□□ 2.09
GADD45A-205ENST00000617962 C19orf67A6NJJ6 358 aa28.08■■■□□ 2.09
GADD45A-205ENST00000617962 IER5Q5VY09 327 aa28.08■■■□□ 2.09
GADD45A-205ENST00000617962 LRRC2Q9BYS8 371 aa28.08■■■□□ 2.09
GADD45A-205ENST00000617962 IGFLR1Q9H665 355 aa28.08■■■□□ 2.09
GADD45A-205ENST00000617962 AZI2Q9H6S1 392 aa28.08■■■□□ 2.09
GADD45A-205ENST00000617962 ALG13Q9NP73 1137 aaKnown RBP28.08■■■□□ 2.09
GADD45A-205ENST00000617962 SLC12A7Q9Y666 1083 aa28.08■■■□□ 2.09
GADD45A-205ENST00000617962 MUC6Q6W4X9 2439 aa28.07■■■□□ 2.08
GADD45A-205ENST00000617962 SLC27A2O14975 620 aa28.07■■■□□ 2.08
GADD45A-205ENST00000617962 MMP1P03956 469 aa28.07■■■□□ 2.08
GADD45A-205ENST00000617962 RPLP2P05387 115 aaKnown RBP28.07■■■□□ 2.08
GADD45A-205ENST00000617962 GTF2F1P35269 517 aaKnown RBP eCLIP28.07■■■□□ 2.081e-8■■□□□ 12.9
GADD45A-205ENST00000617962 TMEM62Q0P6H9 643 aa28.07■■■□□ 2.08
GADD45A-205ENST00000617962 TMTC3Q6ZXV5 915 aa28.07■■■□□ 2.08
GADD45A-205ENST00000617962 RTN4RL1Q86UN2 441 aaPredicted RBP28.07■■■□□ 2.08
GADD45A-205ENST00000617962 FANCBQ8NB91 859 aa28.07■■■□□ 2.08
GADD45A-205ENST00000617962 PLVAPQ9BX97 442 aa28.07■■■□□ 2.08
GADD45A-205ENST00000617962 LSG1Q9H089 658 aaKnown RBP28.07■■■□□ 2.08
GADD45A-205ENST00000617962 SLC9A2Q9UBY0 812 aa28.07■■■□□ 2.08
GADD45A-205ENST00000617962 TRPC6Q9Y210 931 aa28.07■■■□□ 2.08
GADD45A-205ENST00000617962 MRPL42Q9Y6G3 142 aaKnown RBP28.07■■■□□ 2.08
GADD45A-205ENST00000617962 TRAPPC12Q8WVT3 735 aa28.06■■■□□ 2.08
GADD45A-205ENST00000617962 KCNH7Q9NS40 1196 aa28.06■■■□□ 2.08
GADD45A-205ENST00000617962 PLAGL2Q9UPG8 496 aa28.06■■■□□ 2.08
GADD45A-205ENST00000617962 TRPV2Q9Y5S1 764 aa28.06■■■□□ 2.08
GADD45A-205ENST00000617962 M0QZ92 97 aa28.05■■■□□ 2.08
GADD45A-205ENST00000617962 SMAD2Q15796 467 aaKnown RBP28.05■■■□□ 2.08
GADD45A-205ENST00000617962 MICU3Q86XE3 530 aa28.05■■■□□ 2.08
GADD45A-205ENST00000617962 CYP2W1Q8TAV3 490 aa28.05■■■□□ 2.08
GADD45A-205ENST00000617962 MXRA8Q9BRK3 442 aa28.05■■■□□ 2.08
GADD45A-205ENST00000617962 FTHL17Q9BXU8 183 aa28.05■■■□□ 2.08
GADD45A-205ENST00000617962 SQORQ9Y6N5 450 aa28.05■■■□□ 2.08
GADD45A-205ENST00000617962 LINC01565O15544 149 aa28.04■■■□□ 2.08
GADD45A-205ENST00000617962 MBTPS2O43462 519 aa28.04■■■□□ 2.08
GADD45A-205ENST00000617962 TBX10O75333 385 aa28.04■■■□□ 2.08
GADD45A-205ENST00000617962 IRS1P35568 1242 aa28.04■■■□□ 2.08
GADD45A-205ENST00000617962 CAMK1Q14012 370 aa28.04■■■□□ 2.08
GADD45A-205ENST00000617962 PLCB4Q15147 1175 aa28.04■■■□□ 2.08
GADD45A-205ENST00000617962 NPAS4Q8IUM7 802 aa28.04■■■□□ 2.08
GADD45A-205ENST00000617962 CMTR2Q8IYT2 770 aaKnown RBP28.04■■■□□ 2.08
GADD45A-205ENST00000617962 CRIPAKQ8N1N5 446 aa28.04■■■□□ 2.08
GADD45A-205ENST00000617962 TNPO1Q92973 898 aaKnown RBP28.04■■■□□ 2.08
GADD45A-205ENST00000617962 SDF4Q9BRK5 362 aa28.04■■■□□ 2.08
GADD45A-205ENST00000617962 PADI3Q9ULW8 664 aa28.04■■■□□ 2.08
GADD45A-205ENST00000617962 PCDHA2Q9Y5H9 948 aa28.04■■■□□ 2.08
GADD45A-205ENST00000617962 ACTR2P61160 394 aa28.03■■■□□ 2.08
GADD45A-205ENST00000617962 PAN2Q504Q3 1202 aaKnown RBP28.03■■■□□ 2.08
GADD45A-205ENST00000617962 CREB3L3Q68CJ9 461 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms