RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 COG2Q14746 738 aa19.2■□□□□ 0.66
PCDHGC3-205ENST00000617641 CATSPERGQ6ZRH7 1159 aa19.2■□□□□ 0.66
PCDHGC3-205ENST00000617641 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.2■□□□□ 0.66
PCDHGC3-205ENST00000617641 TSC1Q92574 1164 aa19.2■□□□□ 0.66
PCDHGC3-205ENST00000617641 LXNQ9BS40 222 aa19.2■□□□□ 0.66
PCDHGC3-205ENST00000617641 ZNF214Q9UL59 606 aaPredicted RBP19.2■□□□□ 0.66
PCDHGC3-205ENST00000617641 ADAMTS5Q9UNA0 930 aa19.2■□□□□ 0.66
PCDHGC3-205ENST00000617641 KIF20AO95235 890 aa19.2■□□□□ 0.66
PCDHGC3-205ENST00000617641 TMEM132BQ14DG7 1078 aa19.2■□□□□ 0.66
PCDHGC3-205ENST00000617641 MAN2A1Q16706 1144 aa19.2■□□□□ 0.66
PCDHGC3-205ENST00000617641 FKBP15Q5T1M5 1219 aa19.2■□□□□ 0.66
PCDHGC3-205ENST00000617641 PDCD2LQ9BRP1 358 aa19.2■□□□□ 0.66
PCDHGC3-205ENST00000617641 SYT17Q9BSW7 474 aa19.2■□□□□ 0.66
PCDHGC3-205ENST00000617641 NDST4Q9H3R1 872 aa19.2■□□□□ 0.66
PCDHGC3-205ENST00000617641 CAPN11Q9UMQ6 739 aa19.2■□□□□ 0.66
PCDHGC3-205ENST00000617641 LUC7L2Q9Y383 392 aaKnown RBP19.2■□□□□ 0.66
PCDHGC3-205ENST00000617641 SNCAIPQ9Y6H5 919 aa19.2■□□□□ 0.66
PCDHGC3-205ENST00000617641 SFI1A8K8P3 1242 aa19.19■□□□□ 0.66
PCDHGC3-205ENST00000617641 MYBP10242 640 aa19.19■□□□□ 0.66
PCDHGC3-205ENST00000617641 TRIM65Q6PJ69 517 aa19.19■□□□□ 0.66
PCDHGC3-205ENST00000617641 C1orf186Q6ZWK4 172 aa19.19■□□□□ 0.66
PCDHGC3-205ENST00000617641 MIER3Q7Z3K6 550 aa19.19■□□□□ 0.66
PCDHGC3-205ENST00000617641 DCPSQ96C86 337 aaKnown RBP19.19■□□□□ 0.66
PCDHGC3-205ENST00000617641 PCMTD1Q96MG8 357 aaPredicted RBP19.19■□□□□ 0.66
PCDHGC3-205ENST00000617641 NACC1Q96RE7 527 aa19.19■□□□□ 0.66
PCDHGC3-205ENST00000617641 ERGIC2Q96RQ1 377 aa19.19■□□□□ 0.66
PCDHGC3-205ENST00000617641 WDR90Q96KV7 1748 aa19.19■□□□□ 0.66
PCDHGC3-205ENST00000617641 DYNC1I1O14576 645 aa19.19■□□□□ 0.66
PCDHGC3-205ENST00000617641 TRIM21P19474 475 aaKnown RBP19.19■□□□□ 0.66
PCDHGC3-205ENST00000617641 MUTP22033 750 aa19.19■□□□□ 0.66
PCDHGC3-205ENST00000617641 ARHGEF16Q5VV41 709 aa19.19■□□□□ 0.66
PCDHGC3-205ENST00000617641 EPM2AIP1Q7L775 607 aaPredicted RBP19.19■□□□□ 0.66
PCDHGC3-205ENST00000617641 TTYH3Q9C0H2 523 aa19.19■□□□□ 0.66
PCDHGC3-205ENST00000617641 COL4A3BPQ9Y5P4 624 aa19.19■□□□□ 0.66
PCDHGC3-205ENST00000617641 ADGRG1Q9Y653 693 aa19.19■□□□□ 0.66
PCDHGC3-205ENST00000617641 HOXD13P35453 343 aa19.18■□□□□ 0.66
PCDHGC3-205ENST00000617641 OAZ1P54368 228 aa19.18■□□□□ 0.66
PCDHGC3-205ENST00000617641 ETF1P62495 437 aaKnown RBP19.18■□□□□ 0.66
PCDHGC3-205ENST00000617641 C9orf131Q5VYM1 1079 aa19.18■□□□□ 0.66
PCDHGC3-205ENST00000617641 TMTC1Q8IUR5 882 aa19.18■□□□□ 0.66
PCDHGC3-205ENST00000617641 SULF1Q8IWU6 871 aa19.18■□□□□ 0.66
PCDHGC3-205ENST00000617641 CNKSR2Q8WXI2 1034 aa19.18■□□□□ 0.66
PCDHGC3-205ENST00000617641 MRPL44Q9H9J2 332 aaKnown RBP19.18■□□□□ 0.66
PCDHGC3-205ENST00000617641 AGPAT5Q9NUQ2 364 aa19.18■□□□□ 0.66
PCDHGC3-205ENST00000617641 PRPF6O94906 941 aaKnown RBP19.18■□□□□ 0.66
PCDHGC3-205ENST00000617641 CCDC175P0C221 793 aa19.18■□□□□ 0.66
PCDHGC3-205ENST00000617641 MAP3K9P80192 1104 aa19.18■□□□□ 0.66
PCDHGC3-205ENST00000617641 CCDC40Q4G0X9 1142 aa19.18■□□□□ 0.66
PCDHGC3-205ENST00000617641 CYP26C1Q6V0L0 522 aa19.18■□□□□ 0.66
PCDHGC3-205ENST00000617641 OR8K1Q8NGG5 319 aa19.18■□□□□ 0.66
PCDHGC3-205ENST00000617641 CEP63Q96MT8 703 aa19.18■□□□□ 0.66
PCDHGC3-205ENST00000617641 DNAJC7Q99615 494 aa19.18■□□□□ 0.66
PCDHGC3-205ENST00000617641 SPDYE16A6NNV3 312 aaPredicted RBP19.17■□□□□ 0.66
PCDHGC3-205ENST00000617641 FAM13AO94988 1023 aa19.17■□□□□ 0.66
PCDHGC3-205ENST00000617641 CHP1Q99653 195 aa19.17■□□□□ 0.66
PCDHGC3-205ENST00000617641 NUP58Q9BVL2 599 aa19.17■□□□□ 0.66
PCDHGC3-205ENST00000617641 DNAI1Q9UI46 699 aa19.17■□□□□ 0.66
PCDHGC3-205ENST00000617641 A0A0U1RQJ8 604 aa19.17■□□□□ 0.66
PCDHGC3-205ENST00000617641 TESPA1A2RU30 521 aaPredicted RBP19.17■□□□□ 0.66
PCDHGC3-205ENST00000617641 GOLGA6L9A6NEM1 432 aa19.17■□□□□ 0.66
PCDHGC3-205ENST00000617641 PLS1Q14651 629 aa19.17■□□□□ 0.66
PCDHGC3-205ENST00000617641 KNOP1Q1ED39 458 aaKnown RBP19.17■□□□□ 0.66
PCDHGC3-205ENST00000617641 NEK9Q8TD19 979 aa19.17■□□□□ 0.66
PCDHGC3-205ENST00000617641 ATRIPQ8WXE1 791 aa19.17■□□□□ 0.66
PCDHGC3-205ENST00000617641 ZMYND15Q9H091 742 aa19.17■□□□□ 0.66
PCDHGC3-205ENST00000617641 SIK3Q9Y2K2 1263 aa19.17■□□□□ 0.66
PCDHGC3-205ENST00000617641 SAMM50Q9Y512 469 aa19.17■□□□□ 0.66
PCDHGC3-205ENST00000617641 GCNT3O95395 438 aa19.16■□□□□ 0.66
PCDHGC3-205ENST00000617641 GAP43P17677 238 aa19.16■□□□□ 0.66
PCDHGC3-205ENST00000617641 SH3D19Q5HYK7 790 aa19.16■□□□□ 0.66
PCDHGC3-205ENST00000617641 ZC3H3Q8IXZ2 948 aaKnown RBP19.16■□□□□ 0.66
PCDHGC3-205ENST00000617641 RETREG2Q8NC44 543 aa19.16■□□□□ 0.66
PCDHGC3-205ENST00000617641 TEX13BQ9BXU2 312 aa19.16■□□□□ 0.66
PCDHGC3-205ENST00000617641 OTOFQ9HC10 1997 aa19.16■□□□□ 0.66
PCDHGC3-205ENST00000617641 ATP9AO75110 1047 aa19.16■□□□□ 0.66
PCDHGC3-205ENST00000617641 TUBB4AP04350 444 aa19.16■□□□□ 0.66
PCDHGC3-205ENST00000617641 ADAM9Q13443 819 aa19.16■□□□□ 0.66
PCDHGC3-205ENST00000617641 EDRF1Q3B7T1 1238 aa19.16■□□□□ 0.66
PCDHGC3-205ENST00000617641 PPP4R3CPQ6ZMV5 832 aa19.16■□□□□ 0.66
PCDHGC3-205ENST00000617641 MYCT1Q8N699 235 aa19.16■□□□□ 0.66
PCDHGC3-205ENST00000617641 ACRBPQ8NEB7 543 aa19.16■□□□□ 0.66
PCDHGC3-205ENST00000617641 OLFML3Q9NRN5 406 aa19.16■□□□□ 0.66
PCDHGC3-205ENST00000617641 ARHGEF35A5YM69 484 aa19.15■□□□□ 0.66
PCDHGC3-205ENST00000617641 ATP2A1O14983 1001 aa19.15■□□□□ 0.66
PCDHGC3-205ENST00000617641 FANCGO15287 622 aa19.15■□□□□ 0.66
PCDHGC3-205ENST00000617641 P4HBP07237 508 aaKnown RBP19.15■□□□□ 0.66
PCDHGC3-205ENST00000617641 TREML2Q5T2D2 321 aa19.15■□□□□ 0.66
PCDHGC3-205ENST00000617641 WDR59Q6PJI9 974 aa19.15■□□□□ 0.66
PCDHGC3-205ENST00000617641 CCDC155Q8N6L0 562 aa19.15■□□□□ 0.66
PCDHGC3-205ENST00000617641 RBM46Q8TBY0 533 aaKnown RBP19.15■□□□□ 0.66
PCDHGC3-205ENST00000617641 TBC1D22BQ9NU19 505 aa19.15■□□□□ 0.66
PCDHGC3-205ENST00000617641 HOXC10Q9NYD6 342 aa19.15■□□□□ 0.66
PCDHGC3-205ENST00000617641 CSADQ9Y600 493 aa19.15■□□□□ 0.66
PCDHGC3-205ENST00000617641 PAPPA2Q9BXP8 1791 aa19.15■□□□□ 0.66
PCDHGC3-205ENST00000617641 EPHB6O15197 1021 aa19.14■□□□□ 0.66
PCDHGC3-205ENST00000617641 PPP1R12BO60237 982 aaPredicted RBP19.14■□□□□ 0.66
PCDHGC3-205ENST00000617641 NR2F2P24468 414 aa19.14■□□□□ 0.66
PCDHGC3-205ENST00000617641 CCND2P30279 289 aa19.14■□□□□ 0.66
PCDHGC3-205ENST00000617641 NMT1P30419 496 aaKnown RBP19.14■□□□□ 0.66
PCDHGC3-205ENST00000617641 KCNA1Q09470 495 aa19.14■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms