RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 TEX13AQ9BXU3 409 aaPredicted RBP5.98□□□□□ -1.45
CUL3-216ENST00000617432 C12orf49Q9H741 205 aa5.98□□□□□ -1.45
CUL3-216ENST00000617432 ACSL6Q9UKU0 697 aa5.98□□□□□ -1.45
CUL3-216ENST00000617432 COL4A1P02462 1669 aa5.97□□□□□ -1.45
CUL3-216ENST00000617432 A0A087WZG4 1122 aa5.97□□□□□ -1.45
CUL3-216ENST00000617432 FZD7O75084 574 aa5.97□□□□□ -1.45
CUL3-216ENST00000617432 PLCG1P19174 1290 aa5.97□□□□□ -1.45
CUL3-216ENST00000617432 HTRA3P83110 453 aa5.97□□□□□ -1.45
CUL3-216ENST00000617432 ZNF200P98182 395 aaPredicted RBP5.97□□□□□ -1.45
CUL3-216ENST00000617432 DALRD3Q5D0E6 543 aaKnown RBP5.97□□□□□ -1.45
CUL3-216ENST00000617432 ARID3AQ99856 593 aa5.97□□□□□ -1.45
CUL3-216ENST00000617432 MIR1-1HGQ9H1L0 117 aa5.97□□□□□ -1.45
CUL3-216ENST00000617432 NIP7Q9Y221 180 aaKnown RBP eCLIP5.97□□□□□ -1.45
CUL3-216ENST00000617432 TIAM2Q8IVF5 1701 aa5.97□□□□□ -1.45
CUL3-216ENST00000617432 NUP98P52948 1817 aa5.96□□□□□ -1.45
CUL3-216ENST00000617432 SLX4Q8IY92 1834 aa5.96□□□□□ -1.45
CUL3-216ENST00000617432 CHL1O00533 1208 aa5.96□□□□□ -1.46
CUL3-216ENST00000617432 BBS9Q3SYG4 887 aa5.96□□□□□ -1.46
CUL3-216ENST00000617432 C9orf131Q5VYM1 1079 aa5.96□□□□□ -1.46
CUL3-216ENST00000617432 ZPBP2Q6X784 338 aa5.96□□□□□ -1.46
CUL3-216ENST00000617432 AGMOQ6ZNB7 445 aa5.96□□□□□ -1.46
CUL3-216ENST00000617432 SPRED1Q7Z699 444 aa5.96□□□□□ -1.46
CUL3-216ENST00000617432 CARFQ8N187 725 aa5.96□□□□□ -1.46
CUL3-216ENST00000617432 CNBD1Q8NA66 436 aa5.96□□□□□ -1.46
CUL3-216ENST00000617432 CHST13Q8NET6 341 aa5.96□□□□□ -1.46
CUL3-216ENST00000617432 SH3RF3Q8TEJ3 882 aaPredicted RBP5.96□□□□□ -1.46
CUL3-216ENST00000617432 PNISRQ8TF01 805 aaKnown RBP5.96□□□□□ -1.46
CUL3-216ENST00000617432 ZNF622Q969S3 477 aaKnown RBP eCLIP5.96□□□□□ -1.46
CUL3-216ENST00000617432 EAF1Q96JC9 268 aaPredicted RBP5.96□□□□□ -1.46
CUL3-216ENST00000617432 CCDC74BQ96LY2 380 aa5.96□□□□□ -1.46
CUL3-216ENST00000617432 NMRK2Q9NPI5 230 aa5.96□□□□□ -1.46
CUL3-216ENST00000617432 CHPF2Q9P2E5 772 aa5.96□□□□□ -1.46
CUL3-216ENST00000617432 MAP3K15Q6ZN16 1313 aa5.96□□□□□ -1.46
CUL3-216ENST00000617432 ARFGEF2Q9Y6D5 1785 aa5.95□□□□□ -1.46
CUL3-216ENST00000617432 SBF1O95248 1867 aa5.95□□□□□ -1.46
CUL3-216ENST00000617432 A0A1W2PQ45 241 aaPredicted RBP5.95□□□□□ -1.46
CUL3-216ENST00000617432 A0A1W2PQY0 241 aa5.95□□□□□ -1.46
CUL3-216ENST00000617432 ELL2O00472 640 aaPredicted RBP5.95□□□□□ -1.46
CUL3-216ENST00000617432 TCERG1O14776 1098 aaKnown RBP5.95□□□□□ -1.46
CUL3-216ENST00000617432 FKTNO75072 461 aa5.95□□□□□ -1.46
CUL3-216ENST00000617432 SYPP08247 313 aa5.95□□□□□ -1.46
CUL3-216ENST00000617432 ZEB1P37275 1124 aaPredicted RBP5.95□□□□□ -1.46
CUL3-216ENST00000617432 C1QTNF8P60827 252 aa5.95□□□□□ -1.46
CUL3-216ENST00000617432 AIMP1Q12904 312 aaKnown RBP5.95□□□□□ -1.46
CUL3-216ENST00000617432 SUSD4Q5VX71 490 aa5.95□□□□□ -1.46
CUL3-216ENST00000617432 SLCO6A1Q86UG4 719 aa5.95□□□□□ -1.46
CUL3-216ENST00000617432 NBPF5PQ86XG9 351 aaPredicted RBP5.95□□□□□ -1.46
CUL3-216ENST00000617432 SYNE4Q8N205 404 aa5.95□□□□□ -1.46
CUL3-216ENST00000617432 TSR2Q969E8 191 aaKnown RBP5.95□□□□□ -1.46
CUL3-216ENST00000617432 PRDM14Q9GZV8 571 aa5.95□□□□□ -1.46
CUL3-216ENST00000617432 RNF181Q9P0P0 153 aa5.95□□□□□ -1.46
CUL3-216ENST00000617432 GPR55Q9Y2T6 319 aaPredicted RBP5.95□□□□□ -1.46
CUL3-216ENST00000617432 CORINQ9Y5Q5 1042 aa5.95□□□□□ -1.46
CUL3-216ENST00000617432 COL4A5P29400 1685 aa5.95□□□□□ -1.46
CUL3-216ENST00000617432 ANKRD36CQ5JPF3 1778 aa5.94□□□□□ -1.46
CUL3-216ENST00000617432 H0YIN7 160 aa5.94□□□□□ -1.46
CUL3-216ENST00000617432 NTSR2O95665 410 aa5.94□□□□□ -1.46
CUL3-216ENST00000617432 PLATP00750 562 aa5.94□□□□□ -1.46
CUL3-216ENST00000617432 ZNF853P0CG23 659 aa5.94□□□□□ -1.46
CUL3-216ENST00000617432 SRGNP10124 158 aa5.94□□□□□ -1.46
CUL3-216ENST00000617432 FMR1Q06787 632 aaKnown RBP eCLIP5.94□□□□□ -1.46
CUL3-216ENST00000617432 CCDC85BQ15834 202 aaPredicted RBP5.94□□□□□ -1.46
CUL3-216ENST00000617432 TSPYL6Q8N831 410 aa5.94□□□□□ -1.46
CUL3-216ENST00000617432 TTLL6Q8N841 843 aa5.94□□□□□ -1.46
CUL3-216ENST00000617432 C8orf58Q8NAV2 365 aa5.94□□□□□ -1.46
CUL3-216ENST00000617432 NUP43Q8NFH3 380 aa5.94□□□□□ -1.46
CUL3-216ENST00000617432 BRIP1Q9BX63 1249 aa5.94□□□□□ -1.46
CUL3-216ENST00000617432 PCED1AQ9H1Q7 454 aa5.94□□□□□ -1.46
CUL3-216ENST00000617432 PNNQ9H307 717 aaKnown RBP5.94□□□□□ -1.46
CUL3-216ENST00000617432 MRS2Q9HD23 443 aa5.94□□□□□ -1.46
CUL3-216ENST00000617432 GNEQ9Y223 722 aaKnown RBP5.94□□□□□ -1.46
CUL3-216ENST00000617432 LAMB2P55268 1798 aa5.94□□□□□ -1.46
CUL3-216ENST00000617432 FER1L6Q2WGJ9 1857 aa5.94□□□□□ -1.46
CUL3-216ENST00000617432 NPHP1O15259 732 aa5.93□□□□□ -1.46
CUL3-216ENST00000617432 ENDOUP21128 410 aaKnown RBP5.93□□□□□ -1.46
CUL3-216ENST00000617432 ST5P78524 1137 aa5.93□□□□□ -1.46
CUL3-216ENST00000617432 DLX2Q07687 328 aaPredicted RBP5.93□□□□□ -1.46
CUL3-216ENST00000617432 LMOD3Q0VAK6 560 aa5.93□□□□□ -1.46
CUL3-216ENST00000617432 CCDC88AQ3V6T2 1871 aa5.93□□□□□ -1.46
CUL3-216ENST00000617432 KIF6Q6ZMV9 814 aa5.93□□□□□ -1.46
CUL3-216ENST00000617432 COPS6Q7L5N1 327 aa5.93□□□□□ -1.46
CUL3-216ENST00000617432 NPM2Q86SE8 214 aaKnown RBP5.93□□□□□ -1.46
CUL3-216ENST00000617432 ZNF34Q8IZ26 560 aa5.93□□□□□ -1.46
CUL3-216ENST00000617432 SNED1Q8TER0 1413 aa5.93□□□□□ -1.46
CUL3-216ENST00000617432 PHAXQ9H814 394 aaKnown RBP5.93□□□□□ -1.46
CUL3-216ENST00000617432 DDX60Q8IY21 1712 aaKnown RBP5.93□□□□□ -1.46
CUL3-216ENST00000617432 ATF2P15336 505 aa5.92□□□□□ -1.46
CUL3-216ENST00000617432 CHMP4BP1P59074 171 aa5.92□□□□□ -1.46
CUL3-216ENST00000617432 TBC1D10BQ4KMP7 808 aaPredicted RBP5.92□□□□□ -1.46
CUL3-216ENST00000617432 DIEXFQ68CQ4 756 aaKnown RBP5.92□□□□□ -1.46
CUL3-216ENST00000617432 CLEC4GQ6UXB4 293 aa5.92□□□□□ -1.46
CUL3-216ENST00000617432 JARID2Q92833 1246 aaPredicted RBP5.92□□□□□ -1.46
CUL3-216ENST00000617432 RNF38Q9H0F5 515 aa5.92□□□□□ -1.46
CUL3-216ENST00000617432 ZNF652Q9Y2D9 606 aa5.92□□□□□ -1.46
CUL3-216ENST00000617432 FAN1Q9Y2M0 1017 aa5.92□□□□□ -1.46
CUL3-216ENST00000617432 TSC22D4Q9Y3Q8 395 aa5.92□□□□□ -1.46
CUL3-216ENST00000617432 TAF1P21675 1872 aa5.92□□□□□ -1.46
CUL3-216ENST00000617432 KLRG2A4D1S0 409 aaPredicted RBP5.91□□□□□ -1.46
CUL3-216ENST00000617432 ERVV-1B6SEH8 477 aa5.91□□□□□ -1.46
CUL3-216ENST00000617432 ANP32CO43423 234 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms