RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 NAALADL2Q58DX5 795 aa20.29■□□□□ 0.84
TRAPPC3-209ENST00000616395 STOX1Q6ZVD7 989 aa20.29■□□□□ 0.84
TRAPPC3-209ENST00000616395 TRIM50Q86XT4 487 aa20.29■□□□□ 0.84
TRAPPC3-209ENST00000616395 LMBR1Q8WVP7 490 aa20.29■□□□□ 0.84
TRAPPC3-209ENST00000616395 SUSD6Q92537 303 aa20.29■□□□□ 0.84
TRAPPC3-209ENST00000616395 USP26Q9BXU7 913 aa20.29■□□□□ 0.84
TRAPPC3-209ENST00000616395 JMJD4Q9H9V9 463 aa20.29■□□□□ 0.84
TRAPPC3-209ENST00000616395 NOP56O00567 594 aaKnown RBP20.28■□□□□ 0.84
TRAPPC3-209ENST00000616395 HOXA13P31271 388 aaPredicted RBP20.28■□□□□ 0.84
TRAPPC3-209ENST00000616395 GHRHRQ02643 423 aa20.28■□□□□ 0.84
TRAPPC3-209ENST00000616395 MFSD6Q6ZSS7 791 aa20.28■□□□□ 0.84
TRAPPC3-209ENST00000616395 CMTR2Q8IYT2 770 aaKnown RBP20.28■□□□□ 0.84
TRAPPC3-209ENST00000616395 PNMA1Q8ND90 353 aa20.28■□□□□ 0.84
TRAPPC3-209ENST00000616395 ESYT1Q9BSJ8 1104 aa20.28■□□□□ 0.84
TRAPPC3-209ENST00000616395 TLE6Q9H808 572 aa20.28■□□□□ 0.84
TRAPPC3-209ENST00000616395 PTPRZ1P23471 2315 aaPredicted RBP20.28■□□□□ 0.84
TRAPPC3-209ENST00000616395 PER2O15055 1255 aa20.27■□□□□ 0.84
TRAPPC3-209ENST00000616395 MGAT3Q09327 533 aa20.27■□□□□ 0.84
TRAPPC3-209ENST00000616395 PAN2Q504Q3 1202 aaKnown RBP20.27■□□□□ 0.84
TRAPPC3-209ENST00000616395 RUFY4Q6ZNE9 571 aa20.27■□□□□ 0.84
TRAPPC3-209ENST00000616395 ZBTB33Q86T24 672 aa20.27■□□□□ 0.84
TRAPPC3-209ENST00000616395 DGKHQ86XP1 1220 aa20.27■□□□□ 0.84
TRAPPC3-209ENST00000616395 TBC1D10CQ8IV04 446 aa20.27■□□□□ 0.84
TRAPPC3-209ENST00000616395 VN1R2Q8NFZ6 395 aa20.27■□□□□ 0.84
TRAPPC3-209ENST00000616395 LINC01599Q8WXQ3 324 aa20.27■□□□□ 0.84
TRAPPC3-209ENST00000616395 CCND2P30279 289 aa20.27■□□□□ 0.83
TRAPPC3-209ENST00000616395 ASPRV1Q53RT3 343 aa20.27■□□□□ 0.83
TRAPPC3-209ENST00000616395 ATP8B4Q8TF62 1192 aa20.27■□□□□ 0.83
TRAPPC3-209ENST00000616395 GPR20Q99678 358 aa20.27■□□□□ 0.83
TRAPPC3-209ENST00000616395 TELO2Q9Y4R8 837 aa20.27■□□□□ 0.83
TRAPPC3-209ENST00000616395 VPS13AQ96RL7 3174 aa20.26■□□□□ 0.83
TRAPPC3-209ENST00000616395 PPFIA3O75145 1194 aa20.26■□□□□ 0.83
TRAPPC3-209ENST00000616395 UTP14CQ5TAP6 766 aaKnown RBP20.26■□□□□ 0.83
TRAPPC3-209ENST00000616395 CRIPAKQ8N1N5 446 aa20.26■□□□□ 0.83
TRAPPC3-209ENST00000616395 TMEM105Q8N8V8 129 aa20.26■□□□□ 0.83
TRAPPC3-209ENST00000616395 MICAL1Q8TDZ2 1067 aa20.26■□□□□ 0.83
TRAPPC3-209ENST00000616395 AMNQ9BXJ7 453 aa20.26■□□□□ 0.83
TRAPPC3-209ENST00000616395 ZNF215Q9UL58 517 aaPredicted RBP20.26■□□□□ 0.83
TRAPPC3-209ENST00000616395 NEDD4P46934 1319 aa20.25■□□□□ 0.83
TRAPPC3-209ENST00000616395 KIAA1671Q9BY89 1806 aa20.25■□□□□ 0.83
TRAPPC3-209ENST00000616395 PPP1R11O60927 126 aaPredicted RBP20.25■□□□□ 0.83
TRAPPC3-209ENST00000616395 PCP11498 1178 aaKnown RBP20.25■□□□□ 0.83
TRAPPC3-209ENST00000616395 SP100P23497 879 aaPredicted RBP20.25■□□□□ 0.83
TRAPPC3-209ENST00000616395 FBXO47Q5MNV8 452 aa20.25■□□□□ 0.83
TRAPPC3-209ENST00000616395 METTL7BQ6UX53 244 aa20.25■□□□□ 0.83
TRAPPC3-209ENST00000616395 CYFIP1Q7L576 1253 aa20.25■□□□□ 0.83
TRAPPC3-209ENST00000616395 FRMD5Q7Z6J6 570 aa20.25■□□□□ 0.83
TRAPPC3-209ENST00000616395 ESR2Q92731 530 aa20.25■□□□□ 0.83
TRAPPC3-209ENST00000616395 KAT14Q9H8E8 782 aa20.25■□□□□ 0.83
TRAPPC3-209ENST00000616395 AGO3Q9H9G7 860 aaKnown RBP20.25■□□□□ 0.83
TRAPPC3-209ENST00000616395 MAP3K20Q9NYL2 800 aaKnown RBP20.25■□□□□ 0.83
TRAPPC3-209ENST00000616395 ZMYM6O95789 1325 aa20.24■□□□□ 0.83
TRAPPC3-209ENST00000616395 NRCAMQ92823 1304 aa20.24■□□□□ 0.83
TRAPPC3-209ENST00000616395 DMDP11532 3685 aa20.24■□□□□ 0.83
TRAPPC3-209ENST00000616395 TAF2Q6P1X5 1199 aa20.24■□□□□ 0.83
TRAPPC3-209ENST00000616395 TSHZ1Q6ZSZ6 1077 aa20.24■□□□□ 0.83
TRAPPC3-209ENST00000616395 RTN4RL1Q86UN2 441 aaPredicted RBP20.24■□□□□ 0.83
TRAPPC3-209ENST00000616395 NPAS4Q8IUM7 802 aa20.24■□□□□ 0.83
TRAPPC3-209ENST00000616395 ADSSL1Q8N142 457 aa20.24■□□□□ 0.83
TRAPPC3-209ENST00000616395 KREMEN2Q8NCW0 462 aa20.24■□□□□ 0.83
TRAPPC3-209ENST00000616395 NKD2Q969F2 451 aaPredicted RBP20.24■□□□□ 0.83
TRAPPC3-209ENST00000616395 NEK1Q96PY6 1258 aa20.24■□□□□ 0.83
TRAPPC3-209ENST00000616395 ANO2Q9NQ90 1003 aa20.24■□□□□ 0.83
TRAPPC3-209ENST00000616395 TTC3P53804 2025 aa20.24■□□□□ 0.83
TRAPPC3-209ENST00000616395 PARP1P09874 1014 aaKnown RBP20.23■□□□□ 0.83
TRAPPC3-209ENST00000616395 CD52P31358 61 aa20.23■□□□□ 0.83
TRAPPC3-209ENST00000616395 GATMP50440 423 aa20.23■□□□□ 0.83
TRAPPC3-209ENST00000616395 NEDD9Q14511 834 aa20.23■□□□□ 0.83
TRAPPC3-209ENST00000616395 DUSP6Q16828 381 aa20.23■□□□□ 0.83
TRAPPC3-209ENST00000616395 FCHSD1Q86WN1 690 aa20.23■□□□□ 0.83
TRAPPC3-209ENST00000616395 S1PR5Q9H228 398 aa20.23■□□□□ 0.83
TRAPPC3-209ENST00000616395 PCDHA1Q9Y5I3 950 aa20.23■□□□□ 0.83
TRAPPC3-209ENST00000616395 CDY2AQ9Y6F7 541 aa20.23■□□□□ 0.83
TRAPPC3-209ENST00000616395 SP4Q02446 784 aa20.22■□□□□ 0.83
TRAPPC3-209ENST00000616395 SEMA3FQ13275 785 aa20.22■□□□□ 0.83
TRAPPC3-209ENST00000616395 RSPH3Q86UC2 560 aa20.22■□□□□ 0.83
TRAPPC3-209ENST00000616395 DNAJB3Q8WWF6 145 aa20.22■□□□□ 0.83
TRAPPC3-209ENST00000616395 APOL5Q9BWW9 433 aa20.22■□□□□ 0.83
TRAPPC3-209ENST00000616395 RNF41Q9H4P4 317 aaPredicted RBP20.22■□□□□ 0.83
TRAPPC3-209ENST00000616395 SPATA31C2B4DYI2 1134 aa20.21■□□□□ 0.83
TRAPPC3-209ENST00000616395 BRD1O95696 1058 aa20.21■□□□□ 0.83
TRAPPC3-209ENST00000616395 MRPS9P82933 396 aaKnown RBP20.21■□□□□ 0.83
TRAPPC3-209ENST00000616395 GNPTABQ3T906 1256 aa20.21■□□□□ 0.83
TRAPPC3-209ENST00000616395 IQCA1Q86XH1 822 aa20.21■□□□□ 0.83
TRAPPC3-209ENST00000616395 HSCBQ8IWL3 235 aa20.21■□□□□ 0.83
TRAPPC3-209ENST00000616395 SAMD3Q8N6K7 520 aa20.21■□□□□ 0.83
TRAPPC3-209ENST00000616395 CDCA3Q99618 268 aaPredicted RBP20.21■□□□□ 0.83
TRAPPC3-209ENST00000616395 PLXNA4Q9HCM2 1894 aa20.21■□□□□ 0.83
TRAPPC3-209ENST00000616395 RIF1Q5UIP0 2472 aaKnown RBP20.21■□□□□ 0.83
TRAPPC3-209ENST00000616395 MYH6P13533 1939 aa20.2■□□□□ 0.82
TRAPPC3-209ENST00000616395 GCOM1H8Y6P7 765 aaPredicted RBP20.2■□□□□ 0.82
TRAPPC3-209ENST00000616395 SGSM2O43147 1006 aa20.2■□□□□ 0.82
TRAPPC3-209ENST00000616395 POLR2MP0CAP2 368 aa20.2■□□□□ 0.82
TRAPPC3-209ENST00000616395 STAG3L1P0CL83 205 aa20.2■□□□□ 0.82
TRAPPC3-209ENST00000616395 TECP42680 631 aa20.2■□□□□ 0.82
TRAPPC3-209ENST00000616395 ANAPC15P60006 121 aa20.2■□□□□ 0.82
TRAPPC3-209ENST00000616395 ERVFC1P60507 584 aa20.2■□□□□ 0.82
TRAPPC3-209ENST00000616395 MTMR3Q13615 1198 aa20.2■□□□□ 0.82
TRAPPC3-209ENST00000616395 RABEP1Q15276 862 aa20.2■□□□□ 0.82
TRAPPC3-209ENST00000616395 ANKRD54Q6NXT1 300 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms