RNA–Protein interactions for RNA: ENST00000612438.1

LINC00547-201, long intergenic non-protein coding RNA 547, humanhuman

TSL 2 BASIC

Gene LINC00547, Length 3,314 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00547-201ENST00000612438 ALS2CLQ60I27 953 aa9.57□□□□□ -0.88
LINC00547-201ENST00000612438 PNMA8AQ86V59 439 aaPredicted RBP9.57□□□□□ -0.88
LINC00547-201ENST00000612438 CCDC65Q8IXS2 484 aa9.57□□□□□ -0.88
LINC00547-201ENST00000612438 SPIRE2Q8WWL2 714 aa9.57□□□□□ -0.88
LINC00547-201ENST00000612438 HVCN1Q96D96 273 aa9.57□□□□□ -0.88
LINC00547-201ENST00000612438 CCDC42Q96M95 316 aa9.57□□□□□ -0.88
LINC00547-201ENST00000612438 ERGIC2Q96RQ1 377 aa9.57□□□□□ -0.88
LINC00547-201ENST00000612438 HINFPQ9BQA5 517 aa9.57□□□□□ -0.88
LINC00547-201ENST00000612438 PCDH18Q9HCL0 1135 aa9.57□□□□□ -0.88
LINC00547-201ENST00000612438 GPCPD1Q9NPB8 672 aa9.57□□□□□ -0.88
LINC00547-201ENST00000612438 DMAP1Q9NPF5 467 aaPredicted RBP9.57□□□□□ -0.88
LINC00547-201ENST00000612438 LRWD1Q9UFC0 647 aa9.57□□□□□ -0.88
LINC00547-201ENST00000612438 FAM205AQ6ZU69 1335 aa9.57□□□□□ -0.88
LINC00547-201ENST00000612438 MYH13Q9UKX3 1938 aa9.57□□□□□ -0.88
LINC00547-201ENST00000612438 ORC4O43929 436 aa9.57□□□□□ -0.88
LINC00547-201ENST00000612438 USO1O60763 962 aaKnown RBP9.57□□□□□ -0.88
LINC00547-201ENST00000612438 HSF2BPO75031 334 aa9.57□□□□□ -0.88
LINC00547-201ENST00000612438 TACC1O75410 805 aa9.57□□□□□ -0.88
LINC00547-201ENST00000612438 FAM200BP0CF97 657 aa9.57□□□□□ -0.88
LINC00547-201ENST00000612438 IL6STP40189 918 aaPredicted RBP9.57□□□□□ -0.88
LINC00547-201ENST00000612438 UBA7P41226 1012 aa9.57□□□□□ -0.88
LINC00547-201ENST00000612438 PSMD7P51665 324 aa9.57□□□□□ -0.88
LINC00547-201ENST00000612438 SEC24CP53992 1094 aa9.57□□□□□ -0.88
LINC00547-201ENST00000612438 CHRNDQ07001 517 aa9.57□□□□□ -0.88
LINC00547-201ENST00000612438 TAF11Q15544 211 aa9.57□□□□□ -0.88
LINC00547-201ENST00000612438 MIIPQ5JXC2 388 aa9.57□□□□□ -0.88
LINC00547-201ENST00000612438 ANKRD40Q6AI12 368 aa9.57□□□□□ -0.88
LINC00547-201ENST00000612438 SPATA4Q8NEY3 305 aa9.57□□□□□ -0.88
LINC00547-201ENST00000612438 KCNN1Q92952 543 aa9.57□□□□□ -0.88
LINC00547-201ENST00000612438 P2RX5Q93086 422 aa9.57□□□□□ -0.88
LINC00547-201ENST00000612438 NAF1Q96HR8 494 aaKnown RBP9.57□□□□□ -0.88
LINC00547-201ENST00000612438 NDNQ99608 321 aa9.57□□□□□ -0.88
LINC00547-201ENST00000612438 TMEM60Q9H2L4 133 aa9.57□□□□□ -0.88
LINC00547-201ENST00000612438 ZNF804BA4D1E1 1349 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 SPDYE5A6NIY4 337 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 USP17L12C9JPN9 530 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 USP17L21D6R901 530 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 ATP2C2O75185 946 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 HNRNPH3P31942 346 aaKnown RBP9.56□□□□□ -0.88
LINC00547-201ENST00000612438 SGSM1Q2NKQ1 1148 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 CCDC152Q4G0S7 254 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 SMIM5Q71RC9 77 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 KRT26Q7Z3Y9 468 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 ZSCAN29Q8IWY8 852 aaPredicted RBP9.56□□□□□ -0.88
LINC00547-201ENST00000612438 CCDC63Q8NA47 563 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 WDR66Q8TBY9 1149 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 AGAP11Q8TF27 550 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 RRP36Q96EU6 259 aaKnown RBP9.56□□□□□ -0.88
LINC00547-201ENST00000612438 CNOT6LQ96LI5 555 aaKnown RBP9.56□□□□□ -0.88
LINC00547-201ENST00000612438 RNPC3Q96LT9 517 aaKnown RBP9.56□□□□□ -0.88
LINC00547-201ENST00000612438 FGD4Q96M96 766 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 PCMTD1Q96MG8 357 aaPredicted RBP9.56□□□□□ -0.88
LINC00547-201ENST00000612438 SH3GLB2Q9NR46 395 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 PCDHA4Q9UN74 947 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 SLIT2O94813 1529 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 BICDL2A1A5D9 508 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 PALM3A6NDB9 673 aaPredicted RBP9.56□□□□□ -0.88
LINC00547-201ENST00000612438 M0R2N6 131 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 UPP2O95045 317 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 CCDC166P0CW27 439 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 ALOX15P16050 662 aaPredicted RBP9.56□□□□□ -0.88
LINC00547-201ENST00000612438 MTIF2P46199 727 aaKnown RBP9.56□□□□□ -0.88
LINC00547-201ENST00000612438 CEP128Q6ZU80 1094 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 APBB1IPQ7Z5R6 666 aaPredicted RBP9.56□□□□□ -0.88
LINC00547-201ENST00000612438 STAG2Q8N3U4 1231 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 CNBD1Q8NA66 436 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 LRRC15Q8TF66 581 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 EEF2KMTQ96G04 330 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 PLIN2Q99541 437 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 NOC4LQ9BVI4 516 aaKnown RBP9.56□□□□□ -0.88
LINC00547-201ENST00000612438 VCX3BQ9H321 246 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 SH2D4AQ9H788 454 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 VCX3AQ9NNX9 186 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 PCDHA13Q9Y5I0 950 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 CAPN6Q9Y6Q1 641 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 NUP98P52948 1817 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 FLOT1O75955 427 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 PLEKP08567 350 aaPredicted RBP9.56□□□□□ -0.88
LINC00547-201ENST00000612438 RHBDL3P58872 404 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 NNTQ13423 1086 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 TTMPQ5BVD1 217 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 FAM47AQ5JRC9 791 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 ANKRD20A2Q5SQ80 823 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 ANKRD20A1Q5TYW2 823 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 ANKRD20A3Q5VUR7 823 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 CACNA2D3Q8IZS8 1091 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 SNRNP27Q8WVK2 155 aaKnown RBP9.56□□□□□ -0.88
LINC00547-201ENST00000612438 IQCDQ96DY2 449 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 ITGB1BP2Q9UKP3 347 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 PLAGL2Q9UPG8 496 aa9.56□□□□□ -0.88
LINC00547-201ENST00000612438 LCA5LO95447 670 aa9.55□□□□□ -0.88
LINC00547-201ENST00000612438 TCP1P17987 556 aaKnown RBP9.55□□□□□ -0.88
LINC00547-201ENST00000612438 MDH1P40925 334 aaKnown RBP9.55□□□□□ -0.88
LINC00547-201ENST00000612438 EPHB4P54760 987 aa9.55□□□□□ -0.88
LINC00547-201ENST00000612438 EVX2Q03828 476 aa9.55□□□□□ -0.88
LINC00547-201ENST00000612438 BTG3Q14201 252 aaPredicted RBP9.55□□□□□ -0.88
LINC00547-201ENST00000612438 SH2D4BQ5SQS7 431 aa9.55□□□□□ -0.88
LINC00547-201ENST00000612438 EMBQ6PCB8 327 aa9.55□□□□□ -0.88
LINC00547-201ENST00000612438 SMC1BQ8NDV3 1235 aa9.55□□□□□ -0.88
LINC00547-201ENST00000612438 RASGRP4Q8TDF6 673 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms