RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 ARHGAP25P42331 645 aa17.57■□□□□ 0.4
RTN1-209ENST00000611068 CUL4BQ13620 913 aa17.57■□□□□ 0.4
RTN1-209ENST00000611068 RBBP5Q15291 538 aaKnown RBP17.57■□□□□ 0.4
RTN1-209ENST00000611068 PARP9Q8IXQ6 854 aa17.57■□□□□ 0.4
RTN1-209ENST00000611068 ATP6V0A4Q9HBG4 840 aa17.57■□□□□ 0.4
RTN1-209ENST00000611068 MAPK8IP1Q9UQF2 711 aa17.57■□□□□ 0.4
RTN1-209ENST00000611068 COL2A1P02458 1487 aaPredicted RBP17.57■□□□□ 0.4
RTN1-209ENST00000611068 OPLAHO14841 1288 aa17.56■□□□□ 0.4
RTN1-209ENST00000611068 CLK2P49760 499 aaKnown RBP17.56■□□□□ 0.4
RTN1-209ENST00000611068 ARL6IP4Q66PJ3 421 aaKnown RBP17.56■□□□□ 0.4
RTN1-209ENST00000611068 RAD9BQ6WBX8 426 aa17.56■□□□□ 0.4
RTN1-209ENST00000611068 ILDR2Q71H61 639 aa17.56■□□□□ 0.4
RTN1-209ENST00000611068 AGBL1Q96MI9 1066 aa17.56■□□□□ 0.4
RTN1-209ENST00000611068 TANGO6Q9C0B7 1094 aa17.56■□□□□ 0.4
RTN1-209ENST00000611068 TPX2Q9ULW0 747 aaKnown RBP17.56■□□□□ 0.4
RTN1-209ENST00000611068 STX17P56962 302 aa17.56■□□□□ 0.4
RTN1-209ENST00000611068 GPC2Q8N158 579 aa17.56■□□□□ 0.4
RTN1-209ENST00000611068 CYP2W1Q8TAV3 490 aa17.56■□□□□ 0.4
RTN1-209ENST00000611068 DDX25Q9UHL0 483 aaKnown RBP17.56■□□□□ 0.4
RTN1-209ENST00000611068 ADGRG1Q9Y653 693 aa17.56■□□□□ 0.4
RTN1-209ENST00000611068 PCNTO95613 3336 aa17.56■□□□□ 0.4
RTN1-209ENST00000611068 hCG_1984214I3L0E3 225 aa17.55■□□□□ 0.4
RTN1-209ENST00000611068 PECAM1P16284 738 aaPredicted RBP17.55■□□□□ 0.4
RTN1-209ENST00000611068 LONP1P36776 959 aaKnown RBP17.55■□□□□ 0.4
RTN1-209ENST00000611068 CDR1P51861 262 aa17.55■□□□□ 0.4
RTN1-209ENST00000611068 THEMIS2Q5TEJ8 643 aa17.55■□□□□ 0.4
RTN1-209ENST00000611068 C9orf131Q5VYM1 1079 aa17.55■□□□□ 0.4
RTN1-209ENST00000611068 RRAGBQ5VZM2 374 aa17.55■□□□□ 0.4
RTN1-209ENST00000611068 ZNF713Q8N859 430 aaPredicted RBP17.55■□□□□ 0.4
RTN1-209ENST00000611068 C3orf20Q8ND61 904 aa17.55■□□□□ 0.4
RTN1-209ENST00000611068 NUDT12Q9BQG2 462 aa17.55■□□□□ 0.4
RTN1-209ENST00000611068 ANO3Q9BYT9 981 aa17.55■□□□□ 0.4
RTN1-209ENST00000611068 HOOK1Q9UJC3 728 aaKnown RBP17.55■□□□□ 0.4
RTN1-209ENST00000611068 RAB27AP51159 221 aa17.55■□□□□ 0.4
RTN1-209ENST00000611068 MYL5Q02045 173 aa17.55■□□□□ 0.4
RTN1-209ENST00000611068 CYB5D1Q6P9G0 228 aa17.55■□□□□ 0.4
RTN1-209ENST00000611068 HINFPQ9BQA5 517 aa17.55■□□□□ 0.4
RTN1-209ENST00000611068 PDXDC2PQ6P474 469 aa17.54■□□□□ 0.4
RTN1-209ENST00000611068 CABP7Q86V35 215 aa17.54■□□□□ 0.4
RTN1-209ENST00000611068 SELENOOQ9BVL4 669 aa17.54■□□□□ 0.4
RTN1-209ENST00000611068 GOLGA6BA6NDN3 693 aa17.54■□□□□ 0.4
RTN1-209ENST00000611068 ADM5C9JUS6 153 aa17.54■□□□□ 0.4
RTN1-209ENST00000611068 TUBBP07437 444 aa17.54■□□□□ 0.4
RTN1-209ENST00000611068 USP14P54578 494 aa17.54■□□□□ 0.4
RTN1-209ENST00000611068 TUBB4BP68371 445 aa17.54■□□□□ 0.4
RTN1-209ENST00000611068 FMR1Q06787 632 aaKnown RBP eCLIP17.54■□□□□ 0.4
RTN1-209ENST00000611068 WHAMMP3Q1A5X7 153 aa17.54■□□□□ 0.4
RTN1-209ENST00000611068 PRR16Q569H4 304 aa17.54■□□□□ 0.4
RTN1-209ENST00000611068 NAALADL2Q58DX5 795 aa17.54■□□□□ 0.4
RTN1-209ENST00000611068 SAAL1Q96ER3 474 aa17.54■□□□□ 0.4
RTN1-209ENST00000611068 DISC1Q9NRI5 854 aa17.54■□□□□ 0.4
RTN1-209ENST00000611068 ZHX2Q9Y6X8 837 aa17.54■□□□□ 0.4
RTN1-209ENST00000611068 PYGLP06737 847 aa17.53■□□□□ 0.4
RTN1-209ENST00000611068 PLCG1P19174 1290 aa17.53■□□□□ 0.4
RTN1-209ENST00000611068 CDC25CP30307 473 aa17.53■□□□□ 0.4
RTN1-209ENST00000611068 NAP1L1P55209 391 aaKnown RBP17.53■□□□□ 0.4
RTN1-209ENST00000611068 MAP3K10Q02779 954 aa17.53■□□□□ 0.4
RTN1-209ENST00000611068 ZEB2O60315 1214 aa17.53■□□□□ 0.4
RTN1-209ENST00000611068 STAT3P40763 770 aa17.53■□□□□ 0.4
RTN1-209ENST00000611068 SLC8A3P57103 927 aa17.53■□□□□ 0.4
RTN1-209ENST00000611068 SPRED3Q2MJR0 410 aa17.53■□□□□ 0.4
RTN1-209ENST00000611068 BTNL9Q6UXG8 535 aa17.53■□□□□ 0.4
RTN1-209ENST00000611068 MAB21L3Q8N8X9 362 aa17.53■□□□□ 0.4
RTN1-209ENST00000611068 WNK4Q96J92 1243 aa17.53■□□□□ 0.4
RTN1-209ENST00000611068 POLR2AP24928 1970 aaKnown RBP17.53■□□□□ 0.4
RTN1-209ENST00000611068 SPDYE3A6NKU9 549 aa17.52■□□□□ 0.4
RTN1-209ENST00000611068 CTNND1O60716 968 aaKnown RBP17.52■□□□□ 0.4
RTN1-209ENST00000611068 FLOT1O75955 427 aa17.52■□□□□ 0.4
RTN1-209ENST00000611068 CD44P16070 742 aaKnown RBP17.52■□□□□ 0.4
RTN1-209ENST00000611068 IFT88Q13099 833 aa17.52■□□□□ 0.4
RTN1-209ENST00000611068 SLC5A9Q2M3M2 681 aa17.52■□□□□ 0.4
RTN1-209ENST00000611068 NAA35Q5VZE5 725 aa17.52■□□□□ 0.4
RTN1-209ENST00000611068 PPP1R18Q6NYC8 613 aa17.52■□□□□ 0.4
RTN1-209ENST00000611068 FUKQ8N0W3 1084 aa17.52■□□□□ 0.4
RTN1-209ENST00000611068 HAS1Q92839 578 aa17.52■□□□□ 0.4
RTN1-209ENST00000611068 MTMR9Q96QG7 549 aa17.52■□□□□ 0.4
RTN1-209ENST00000611068 RAVER2Q9HCJ3 691 aaKnown RBP17.52■□□□□ 0.4
RTN1-209ENST00000611068 SLC39A2Q9NP94 309 aa17.52■□□□□ 0.4
RTN1-209ENST00000611068 LRWD1Q9UFC0 647 aa17.52■□□□□ 0.4
RTN1-209ENST00000611068 CLSTN1O94985 981 aa17.52■□□□□ 0.4
RTN1-209ENST00000611068 SARSP49591 514 aaKnown RBP17.52■□□□□ 0.4
RTN1-209ENST00000611068 ATP1A2P50993 1020 aa17.52■□□□□ 0.4
RTN1-209ENST00000611068 DPYDQ12882 1025 aa17.52■□□□□ 0.4
RTN1-209ENST00000611068 CHURC1Q8WUH1 139 aa17.52■□□□□ 0.4
RTN1-209ENST00000611068 MMTAG2Q9BU76 263 aaKnown RBP17.52■□□□□ 0.4
RTN1-209ENST00000611068 EMILIN3Q9NT22 766 aa17.52■□□□□ 0.4
RTN1-209ENST00000611068 HAUS2Q9NVX0 235 aa17.52■□□□□ 0.4
RTN1-209ENST00000611068 HMGCS2P54868 508 aa17.51■□□□□ 0.39
RTN1-209ENST00000611068 SPECC1LQ69YQ0 1117 aa17.51■□□□□ 0.39
RTN1-209ENST00000611068 YTHDF3Q7Z739 585 aaKnown RBP17.51■□□□□ 0.39
RTN1-209ENST00000611068 LDHDQ86WU2 507 aa17.51■□□□□ 0.39
RTN1-209ENST00000611068 NAPGQ99747 312 aaPredicted RBP17.51■□□□□ 0.39
RTN1-209ENST00000611068 MYH7BA7E2Y1 1941 aa17.51■□□□□ 0.39
RTN1-209ENST00000611068 PEX10O60683 326 aa17.51■□□□□ 0.39
RTN1-209ENST00000611068 ARHGAP4P98171 946 aa17.51■□□□□ 0.39
RTN1-209ENST00000611068 MORC3Q14149 939 aa17.51■□□□□ 0.39
RTN1-209ENST00000611068 KANK3Q6NY19 840 aa17.51■□□□□ 0.39
RTN1-209ENST00000611068 MOB2Q70IA6 237 aa17.51■□□□□ 0.39
RTN1-209ENST00000611068 SH3RF1Q7Z6J0 888 aa17.51■□□□□ 0.39
RTN1-209ENST00000611068 TRIM74Q86UV6 250 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms