RNA–Protein interactions for RNA: ENST00000610538.4

TP53-219, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-219ENST00000610538 MYPNQ86TC9 1320 aa13.69□□□□□ -0.22
TP53-219ENST00000610538 KCNJ18B7U540 433 aa13.69□□□□□ -0.22
TP53-219ENST00000610538 CBFA2T2O43439 604 aa13.69□□□□□ -0.22
TP53-219ENST00000610538 CNMDO75829 334 aa13.69□□□□□ -0.22
TP53-219ENST00000610538 CCNE2O96020 404 aa13.69□□□□□ -0.22
TP53-219ENST00000610538 CASP5P51878 434 aa13.69□□□□□ -0.22
TP53-219ENST00000610538 TERF1P54274 439 aa13.69□□□□□ -0.22
TP53-219ENST00000610538 KCNJ12Q14500 433 aa13.69□□□□□ -0.22
TP53-219ENST00000610538 TCP11X2Q5H9J9 407 aa13.69□□□□□ -0.22
TP53-219ENST00000610538 FAM26FQ5R3K3 315 aa13.69□□□□□ -0.22
TP53-219ENST00000610538 RINT1Q6NUQ1 792 aa13.69□□□□□ -0.22
TP53-219ENST00000610538 B3GNT9Q6UX72 402 aa13.69□□□□□ -0.22
TP53-219ENST00000610538 FASTKD5Q7L8L6 764 aaKnown RBP13.69□□□□□ -0.22
TP53-219ENST00000610538 CCDC65Q8IXS2 484 aa13.69□□□□□ -0.22
TP53-219ENST00000610538 CPLX3Q8WVH0 158 aa13.69□□□□□ -0.22
TP53-219ENST00000610538 GBA2Q9HCG7 927 aaPredicted RBP13.69□□□□□ -0.22
TP53-219ENST00000610538 TCEAL9Q9UHQ7 104 aa13.69□□□□□ -0.22
TP53-219ENST00000610538 N4BP3O15049 544 aa13.68□□□□□ -0.22
TP53-219ENST00000610538 NR1I3Q14994 352 aa13.68□□□□□ -0.22
TP53-219ENST00000610538 EPHA7Q15375 998 aa13.68□□□□□ -0.22
TP53-219ENST00000610538 UGCGQ16739 394 aa13.68□□□□□ -0.22
TP53-219ENST00000610538 RIOX2Q8IUF8 465 aa13.68□□□□□ -0.22
TP53-219ENST00000610538 SMCR8Q8TEV9 937 aaPredicted RBP13.68□□□□□ -0.22
TP53-219ENST00000610538 DHTKD1Q96HY7 919 aaPredicted RBP13.68□□□□□ -0.22
TP53-219ENST00000610538 TUFT1Q9NNX1 390 aa13.68□□□□□ -0.22
TP53-219ENST00000610538 SCN4AP35499 1836 aa13.68□□□□□ -0.22
TP53-219ENST00000610538 WDR90Q96KV7 1748 aa13.68□□□□□ -0.22
TP53-219ENST00000610538 EYA4O95677 639 aa13.68□□□□□ -0.22
TP53-219ENST00000610538 CCNE1P24864 410 aa13.68□□□□□ -0.22
TP53-219ENST00000610538 SP2Q02086 613 aa13.68□□□□□ -0.22
TP53-219ENST00000610538 EHHADHQ08426 723 aa13.68□□□□□ -0.22
TP53-219ENST00000610538 ARMCX5Q6P1M9 558 aa13.68□□□□□ -0.22
TP53-219ENST00000610538 NLRX1Q86UT6 975 aa13.68□□□□□ -0.22
TP53-219ENST00000610538 SFR1Q86XK3 245 aa13.68□□□□□ -0.22
TP53-219ENST00000610538 MB21D1Q8N884 522 aa13.68□□□□□ -0.22
TP53-219ENST00000610538 CHST13Q8NET6 341 aa13.68□□□□□ -0.22
TP53-219ENST00000610538 ADD3Q9UEY8 706 aaKnown RBP13.68□□□□□ -0.22
TP53-219ENST00000610538 FRMPD4Q14CM0 1322 aa13.67□□□□□ -0.22
TP53-219ENST00000610538 POTEB2H3BUK9 544 aa13.67□□□□□ -0.22
TP53-219ENST00000610538 CST9Q5W186 159 aa13.67□□□□□ -0.22
TP53-219ENST00000610538 VSTM4Q8IW00 320 aa13.67□□□□□ -0.22
TP53-219ENST00000610538 SAMD3Q8N6K7 520 aa13.67□□□□□ -0.22
TP53-219ENST00000610538 INPP4AQ96PE3 977 aaPredicted RBP13.67□□□□□ -0.22
TP53-219ENST00000610538 NACC1Q96RE7 527 aa13.67□□□□□ -0.22
TP53-219ENST00000610538 PORCNQ9H237 461 aa13.67□□□□□ -0.22
TP53-219ENST00000610538 EFCC1Q9HA90 598 aa13.67□□□□□ -0.22
TP53-219ENST00000610538 TBC1D22BQ9NU19 505 aa13.67□□□□□ -0.22
TP53-219ENST00000610538 A0A1B0GTH6 734 aa13.67□□□□□ -0.22
TP53-219ENST00000610538 TPM3P06753 285 aa13.67□□□□□ -0.22
TP53-219ENST00000610538 OSBPP22059 807 aa13.67□□□□□ -0.22
TP53-219ENST00000610538 ADKP55263 362 aaKnown RBP13.67□□□□□ -0.22
TP53-219ENST00000610538 KCNA1Q09470 495 aa13.67□□□□□ -0.22
TP53-219ENST00000610538 NIPA1Q7RTP0 329 aa13.67□□□□□ -0.22
TP53-219ENST00000610538 MYOCDQ8IZQ8 938 aa13.67□□□□□ -0.22
TP53-219ENST00000610538 ANKRD13CQ8N6S4 541 aa13.67□□□□□ -0.22
TP53-219ENST00000610538 C2orf69Q8N8R5 385 aa13.67□□□□□ -0.22
TP53-219ENST00000610538 IKZF4Q9H2S9 585 aa13.67□□□□□ -0.22
TP53-219ENST00000610538 PCDHA2Q9Y5H9 948 aa13.67□□□□□ -0.22
TP53-219ENST00000610538 CCL15-CCL14A0A0B4J2E2 113 aa13.66□□□□□ -0.22
TP53-219ENST00000610538 SOWAHBA6NEL2 793 aa13.66□□□□□ -0.22
TP53-219ENST00000610538 BTBD19C9JJ37 291 aa13.66□□□□□ -0.22
TP53-219ENST00000610538 PDHXO00330 501 aa13.66□□□□□ -0.22
TP53-219ENST00000610538 ZNF500O60304 480 aaPredicted RBP13.66□□□□□ -0.22
TP53-219ENST00000610538 P4HBP07237 508 aaKnown RBP13.66□□□□□ -0.22
TP53-219ENST00000610538 SKILP12757 684 aa13.66□□□□□ -0.22
TP53-219ENST00000610538 CCL15Q16663 113 aa13.66□□□□□ -0.22
TP53-219ENST00000610538 CEP135Q66GS9 1140 aa13.66□□□□□ -0.22
TP53-219ENST00000610538 CENPPQ6IPU0 288 aa13.66□□□□□ -0.22
TP53-219ENST00000610538 CYFIP1Q7L576 1253 aa13.66□□□□□ -0.22
TP53-219ENST00000610538 KSR1Q8IVT5 923 aa13.66□□□□□ -0.22
TP53-219ENST00000610538 MS4A4AQ96JQ5 239 aa13.66□□□□□ -0.22
TP53-219ENST00000610538 MRPL44Q9H9J2 332 aaKnown RBP13.66□□□□□ -0.22
TP53-219ENST00000610538 QARSP47897 775 aaKnown RBP13.66□□□□□ -0.22
TP53-219ENST00000610538 NPEPPSP55786 919 aa13.66□□□□□ -0.22
TP53-219ENST00000610538 STXBP2Q15833 593 aa13.66□□□□□ -0.22
TP53-219ENST00000610538 PLA2G4FQ68DD2 849 aa13.66□□□□□ -0.22
TP53-219ENST00000610538 C1orf186Q6ZWK4 172 aa13.66□□□□□ -0.22
TP53-219ENST00000610538 MYCT1Q8N699 235 aa13.66□□□□□ -0.22
TP53-219ENST00000610538 SCFD1Q8WVM8 642 aa13.66□□□□□ -0.22
TP53-219ENST00000610538 STK24Q9Y6E0 443 aa13.66□□□□□ -0.22
TP53-219ENST00000610538 BICDL2A1A5D9 508 aa13.65□□□□□ -0.22
TP53-219ENST00000610538 ARHGEF35A5YM69 484 aa13.65□□□□□ -0.22
TP53-219ENST00000610538 PRPF6O94906 941 aaKnown RBP13.65□□□□□ -0.22
TP53-219ENST00000610538 MYBP10242 640 aa13.65□□□□□ -0.22
TP53-219ENST00000610538 KCNA2P16389 499 aa13.65□□□□□ -0.22
TP53-219ENST00000610538 ALDH5A1P51649 535 aaPredicted RBP13.65□□□□□ -0.22
TP53-219ENST00000610538 COPB1P53618 953 aaKnown RBP13.65□□□□□ -0.22
TP53-219ENST00000610538 FILIP1LQ4L180 1135 aa13.65□□□□□ -0.22
TP53-219ENST00000610538 SPECC1LQ69YQ0 1117 aa13.65□□□□□ -0.22
TP53-219ENST00000610538 GUF1Q8N442 669 aaKnown RBP13.65□□□□□ -0.22
TP53-219ENST00000610538 KCTD17Q8N5Z5 321 aa13.65□□□□□ -0.22
TP53-219ENST00000610538 BRI3BPQ8WY22 251 aa13.65□□□□□ -0.22
TP53-219ENST00000610538 ZSWIM4Q9H7M6 989 aa13.65□□□□□ -0.22
TP53-219ENST00000610538 MAGEC2Q9UBF1 373 aaPredicted RBP13.65□□□□□ -0.22
TP53-219ENST00000610538 TBCAO75347 108 aaKnown RBP13.65□□□□□ -0.22
TP53-219ENST00000610538 SFPQP23246 707 aaKnown RBP eCLIP13.65□□□□□ -0.22
TP53-219ENST00000610538 UBXN1Q04323 297 aa13.65□□□□□ -0.22
TP53-219ENST00000610538 PSMD2Q13200 908 aa13.65□□□□□ -0.22
TP53-219ENST00000610538 ZC2HC1CQ53FD0 456 aaPredicted RBP13.65□□□□□ -0.22
TP53-219ENST00000610538 SWSAP1Q6NVH7 229 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms