RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 FBXO47Q5MNV8 452 aa19.96■□□□□ 0.79
CHMP4A-211ENST00000609024 SPOUT1Q5T280 376 aaKnown RBP19.96■□□□□ 0.79
CHMP4A-211ENST00000609024 RBM23Q86U06 439 aaKnown RBP19.96■□□□□ 0.79
CHMP4A-211ENST00000609024 CHD1LQ86WJ1 897 aa19.96■□□□□ 0.79
CHMP4A-211ENST00000609024 NPAS4Q8IUM7 802 aa19.96■□□□□ 0.79
CHMP4A-211ENST00000609024 EFHBQ8N7U6 833 aa19.96■□□□□ 0.79
CHMP4A-211ENST00000609024 SEPT1Q8WYJ6 367 aa19.96■□□□□ 0.79
CHMP4A-211ENST00000609024 RRP36Q96EU6 259 aaKnown RBP19.96■□□□□ 0.79
CHMP4A-211ENST00000609024 FAM49AQ9H0Q0 323 aaPredicted RBP19.96■□□□□ 0.79
CHMP4A-211ENST00000609024 SMARCAD1Q9H4L7 1026 aa19.96■□□□□ 0.79
CHMP4A-211ENST00000609024 RC3H2Q9HBD1 1191 aaKnown RBP19.96■□□□□ 0.79
CHMP4A-211ENST00000609024 MRPL42Q9Y6G3 142 aaKnown RBP19.96■□□□□ 0.79
CHMP4A-211ENST00000609024 DOCK5Q9H7D0 1870 aa19.96■□□□□ 0.79
CHMP4A-211ENST00000609024 EYA4O95677 639 aa19.95■□□□□ 0.78
CHMP4A-211ENST00000609024 LINC00271P0C7V0 271 aa19.95■□□□□ 0.78
CHMP4A-211ENST00000609024 IBSPP21815 317 aaPredicted RBP19.95■□□□□ 0.78
CHMP4A-211ENST00000609024 CD52P31358 61 aa19.95■□□□□ 0.78
CHMP4A-211ENST00000609024 MRPS6P82932 125 aaKnown RBP19.95■□□□□ 0.78
CHMP4A-211ENST00000609024 MGAT3Q09327 533 aa19.95■□□□□ 0.78
CHMP4A-211ENST00000609024 PLEKHM2Q8IWE5 1019 aa19.95■□□□□ 0.78
CHMP4A-211ENST00000609024 KLHL23Q8NBE8 558 aa19.95■□□□□ 0.78
CHMP4A-211ENST00000609024 POF1BQ8WVV4 589 aa19.95■□□□□ 0.78
CHMP4A-211ENST00000609024 SNX27Q96L92 541 aa19.95■□□□□ 0.78
CHMP4A-211ENST00000609024 OSBPL3Q9H4L5 887 aa19.95■□□□□ 0.78
CHMP4A-211ENST00000609024 U3KPZ7 1027 aaPredicted RBP19.95■□□□□ 0.78
CHMP4A-211ENST00000609024 RRN3P2A6NIE6 340 aa19.94■□□□□ 0.78
CHMP4A-211ENST00000609024 CYTH3O43739 400 aa19.94■□□□□ 0.78
CHMP4A-211ENST00000609024 ST18O60284 1047 aa19.94■□□□□ 0.78
CHMP4A-211ENST00000609024 ITGB1P05556 798 aa19.94■□□□□ 0.78
CHMP4A-211ENST00000609024 ZXDAP98168 799 aa19.94■□□□□ 0.78
CHMP4A-211ENST00000609024 COASYQ13057 564 aa19.94■□□□□ 0.78
CHMP4A-211ENST00000609024 PAK2Q13177 524 aa19.94■□□□□ 0.78
CHMP4A-211ENST00000609024 USP17L6PQ6QN14 398 aa19.94■□□□□ 0.78
CHMP4A-211ENST00000609024 PRSS33Q8NF86 280 aa19.94■□□□□ 0.78
CHMP4A-211ENST00000609024 SPPL3Q8TCT6 385 aa19.94■□□□□ 0.78
CHMP4A-211ENST00000609024 GPRASP2Q96D09 838 aa19.94■□□□□ 0.78
CHMP4A-211ENST00000609024 MSLNLQ96KJ4 702 aa19.94■□□□□ 0.78
CHMP4A-211ENST00000609024 RPGRIP1Q96KN7 1286 aa19.94■□□□□ 0.78
CHMP4A-211ENST00000609024 IRF2BPLQ9H1B7 796 aa19.94■□□□□ 0.78
CHMP4A-211ENST00000609024 AZI2Q9H6S1 392 aa19.94■□□□□ 0.78
CHMP4A-211ENST00000609024 TLE6Q9H808 572 aa19.94■□□□□ 0.78
CHMP4A-211ENST00000609024 PKD2L1Q9P0L9 805 aa19.94■□□□□ 0.78
CHMP4A-211ENST00000609024 ZNF318Q5VUA4 2279 aa19.93■□□□□ 0.78
CHMP4A-211ENST00000609024 FSD2A1L4K1 749 aa19.93■□□□□ 0.78
CHMP4A-211ENST00000609024 PPFIA3O75145 1194 aa19.93■□□□□ 0.78
CHMP4A-211ENST00000609024 SRGAP2BP0DMP2 458 aa19.93■□□□□ 0.78
CHMP4A-211ENST00000609024 KIF5BP33176 963 aa19.93■□□□□ 0.78
CHMP4A-211ENST00000609024 ZBTB33Q86T24 672 aa19.93■□□□□ 0.78
CHMP4A-211ENST00000609024 FBXL6Q8N531 539 aa19.93■□□□□ 0.78
CHMP4A-211ENST00000609024 SMRP1Q8NCR6 262 aa19.93■□□□□ 0.78
CHMP4A-211ENST00000609024 CTCFLQ8NI51 663 aaPredicted RBP19.93■□□□□ 0.78
CHMP4A-211ENST00000609024 AAASQ9NRG9 546 aa19.93■□□□□ 0.78
CHMP4A-211ENST00000609024 RNF216Q9NWF9 866 aaPredicted RBP19.93■□□□□ 0.78
CHMP4A-211ENST00000609024 BARX2Q9UMQ3 279 aaPredicted RBP19.93■□□□□ 0.78
CHMP4A-211ENST00000609024 TRPC6Q9Y210 931 aa19.93■□□□□ 0.78
CHMP4A-211ENST00000609024 TELO2Q9Y4R8 837 aa19.93■□□□□ 0.78
CHMP4A-211ENST00000609024 PCDHB12Q9Y5F1 795 aa19.93■□□□□ 0.78
CHMP4A-211ENST00000609024 SQORQ9Y6N5 450 aa19.93■□□□□ 0.78
CHMP4A-211ENST00000609024 ATG2AQ2TAZ0 1938 aa19.93■□□□□ 0.78
CHMP4A-211ENST00000609024 BAZ2BQ9UIF8 2168 aaKnown RBP19.93■□□□□ 0.78
CHMP4A-211ENST00000609024 SCG2P13521 617 aa19.92■□□□□ 0.78
CHMP4A-211ENST00000609024 CAMK1Q14012 370 aa19.92■□□□□ 0.78
CHMP4A-211ENST00000609024 SLC35G1Q2M3R5 365 aa19.92■□□□□ 0.78
CHMP4A-211ENST00000609024 IER5LQ5T953 404 aa19.92■□□□□ 0.78
CHMP4A-211ENST00000609024 ADGRD2Q7Z7M1 963 aa19.92■□□□□ 0.78
CHMP4A-211ENST00000609024 NCOA7Q8NI08 942 aa19.92■□□□□ 0.78
CHMP4A-211ENST00000609024 PHOX2BQ99453 314 aa19.92■□□□□ 0.78
CHMP4A-211ENST00000609024 PHF7Q9BWX1 381 aaPredicted RBP19.92■□□□□ 0.78
CHMP4A-211ENST00000609024 AGO3Q9H9G7 860 aaKnown RBP19.92■□□□□ 0.78
CHMP4A-211ENST00000609024 CLEC1BQ9P126 229 aa19.92■□□□□ 0.78
CHMP4A-211ENST00000609024 USP15Q9Y4E8 981 aaPredicted RBP19.92■□□□□ 0.78
CHMP4A-211ENST00000609024 TRPV2Q9Y5S1 764 aa19.92■□□□□ 0.78
CHMP4A-211ENST00000609024 WDFY4Q6ZS81 3184 aa19.92■□□□□ 0.78
CHMP4A-211ENST00000609024 TTC3P53804 2025 aa19.92■□□□□ 0.78
CHMP4A-211ENST00000609024 MBLAC1A4D2B0 266 aaPredicted RBP19.91■□□□□ 0.78
CHMP4A-211ENST00000609024 LOC730098B7Z3J9 87 aa19.91■□□□□ 0.78
CHMP4A-211ENST00000609024 PIK3CDO00329 1044 aa19.91■□□□□ 0.78
CHMP4A-211ENST00000609024 DNAJB1P25685 340 aa19.91■□□□□ 0.78
CHMP4A-211ENST00000609024 SIGLEC14Q08ET2 396 aa19.91■□□□□ 0.78
CHMP4A-211ENST00000609024 MTMR1Q13613 665 aa19.91■□□□□ 0.78
CHMP4A-211ENST00000609024 AAMPQ13685 434 aa19.91■□□□□ 0.78
CHMP4A-211ENST00000609024 SMC5Q8IY18 1101 aa19.91■□□□□ 0.78
CHMP4A-211ENST00000609024 PCDHB7Q9Y5E2 793 aa19.91■□□□□ 0.78
CHMP4A-211ENST00000609024 C5orf42Q9H799 3197 aa19.9■□□□□ 0.78
CHMP4A-211ENST00000609024 GSTTP1A0A1W2PQM5 241 aa19.9■□□□□ 0.78
CHMP4A-211ENST00000609024 SPDYE3A6NKU9 549 aa19.9■□□□□ 0.78
CHMP4A-211ENST00000609024 ATP9AO75110 1047 aa19.9■□□□□ 0.78
CHMP4A-211ENST00000609024 INSRRP14616 1297 aa19.9■□□□□ 0.78
CHMP4A-211ENST00000609024 KCNA2P16389 499 aa19.9■□□□□ 0.78
CHMP4A-211ENST00000609024 TMEM62Q0P6H9 643 aa19.9■□□□□ 0.78
CHMP4A-211ENST00000609024 TROAPQ12815 778 aa19.9■□□□□ 0.78
CHMP4A-211ENST00000609024 RUFY2Q8WXA3 655 aa19.9■□□□□ 0.78
CHMP4A-211ENST00000609024 NEK1Q96PY6 1258 aa19.9■□□□□ 0.78
CHMP4A-211ENST00000609024 PADI3Q9ULW8 664 aa19.9■□□□□ 0.78
CHMP4A-211ENST00000609024 MAFGO15525 162 aa19.89■□□□□ 0.77
CHMP4A-211ENST00000609024 TECTAO75443 2155 aa19.89■□□□□ 0.77
CHMP4A-211ENST00000609024 NUCB1Q02818 461 aa19.89■□□□□ 0.77
CHMP4A-211ENST00000609024 UBE3AQ05086 875 aa19.89■□□□□ 0.77
CHMP4A-211ENST00000609024 NFX1Q12986 1120 aaKnown RBP19.89■□□□□ 0.77
CHMP4A-211ENST00000609024 MARCH8Q5T0T0 291 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms