RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.61□□□□□ -1.51
SSX9-202ENST00000608568 MRPS27Q92552 414 aaKnown RBP5.61□□□□□ -1.51
SSX9-202ENST00000608568 CLP1Q92989 425 aaKnown RBP5.61□□□□□ -1.51
SSX9-202ENST00000608568 TTC28Q96AY4 2481 aa5.61□□□□□ -1.51
SSX9-202ENST00000608568 DHX58Q96C10 678 aa5.61□□□□□ -1.51
SSX9-202ENST00000608568 PPP1R14BQ96C90 147 aa5.61□□□□□ -1.51
SSX9-202ENST00000608568 SPAG5Q96R06 1193 aa5.61□□□□□ -1.51
SSX9-202ENST00000608568 NAPGQ99747 312 aaPredicted RBP5.61□□□□□ -1.51
SSX9-202ENST00000608568 CCDC8Q9H0W5 538 aaPredicted RBP5.61□□□□□ -1.51
SSX9-202ENST00000608568 EPN3Q9H201 632 aa5.61□□□□□ -1.51
SSX9-202ENST00000608568 SPTBN5Q9NRC6 3674 aaKnown RBP5.61□□□□□ -1.51
SSX9-202ENST00000608568 AATFQ9NY61 560 aaKnown RBP eCLIP5.61□□□□□ -1.51
SSX9-202ENST00000608568 CTNNAL1Q9UBT7 734 aa5.61□□□□□ -1.51
SSX9-202ENST00000608568 SRRDQ9UH36 339 aa5.61□□□□□ -1.51
SSX9-202ENST00000608568 DDX20Q9UHI6 824 aaKnown RBP5.61□□□□□ -1.51
SSX9-202ENST00000608568 SAP30BPQ9UHR5 308 aaKnown RBP5.61□□□□□ -1.51
SSX9-202ENST00000608568 DACH1Q9UI36 760 aa5.61□□□□□ -1.51
SSX9-202ENST00000608568 HOOK1Q9UJC3 728 aaKnown RBP5.61□□□□□ -1.51
SSX9-202ENST00000608568 ITGB1BP2Q9UKP3 347 aa5.61□□□□□ -1.51
SSX9-202ENST00000608568 FAM184BQ9ULE4 1060 aa5.61□□□□□ -1.51
SSX9-202ENST00000608568 ZHX2Q9Y6X8 837 aa5.61□□□□□ -1.51
SSX9-202ENST00000608568 ATG2AQ2TAZ0 1938 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 MYH15Q9Y2K3 1946 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 GOLGA6BA6NDN3 693 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 CFAP73A6NFT4 308 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 ENO4A6NNW6 628 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 LRRIQ3A6PVS8 624 aaPredicted RBP5.6□□□□□ -1.51
SSX9-202ENST00000608568 SMAPO00193 183 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 CAND2O75155 1236 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 YEATS4O95619 227 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 SKIP12755 728 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 TNFRSF8P28908 595 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 ABCD1P33897 745 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 HMGCS2P54868 508 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 NAP1L1P55209 391 aaKnown RBP5.6□□□□□ -1.51
SSX9-202ENST00000608568 MARSP56192 900 aaKnown RBP5.6□□□□□ -1.51
SSX9-202ENST00000608568 VSNL1P62760 191 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 GNGT1P63211 74 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 TRIM32Q13049 653 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 ZRSR2Q15696 482 aaKnown RBP5.6□□□□□ -1.51
SSX9-202ENST00000608568 CCDC96Q2M329 555 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 TBC1D25Q3MII6 688 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 CWF19L1Q69YN2 538 aaKnown RBP5.6□□□□□ -1.51
SSX9-202ENST00000608568 SPECC1LQ69YQ0 1117 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 PPP4R3AQ6IN85 833 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 EMBQ6PCB8 327 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 USP17L2Q6R6M4 530 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 MTHFD1LQ6UB35 978 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 KDM7AQ6ZMT4 941 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 SYNE3Q6ZMZ3 975 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 CCDC121Q6ZUS5 278 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 UBE2Q1Q7Z7E8 422 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 TRIM74Q86UV6 250 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 TRIM73Q86UV7 250 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 SESTD1Q86VW0 696 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 CCDC13Q8IYE1 715 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 FUKQ8N0W3 1084 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 KCNG4Q8TDN1 519 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 OTUD7AQ8TE49 926 aaPredicted RBP5.6□□□□□ -1.51
SSX9-202ENST00000608568 LMBR1Q8WVP7 490 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 KHSRPQ92945 711 aaKnown RBP eCLIP5.6□□□□□ -1.51
SSX9-202ENST00000608568 EAF2Q96CJ1 260 aaPredicted RBP5.6□□□□□ -1.51
SSX9-202ENST00000608568 SPDL1Q96EA4 605 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 EDC3Q96F86 508 aaKnown RBP5.6□□□□□ -1.51
SSX9-202ENST00000608568 WDR24Q96S15 920 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 TSPAN18Q96SJ8 248 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 UNC93B1Q9H1C4 597 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 KAT14Q9H8E8 782 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 SLC40A1Q9NP59 571 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 MUC3AQ02505 3323 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 TET1Q8NFU7 2136 aa5.6□□□□□ -1.51
SSX9-202ENST00000608568 ZBBXA8MT70 800 aa5.59□□□□□ -1.51
SSX9-202ENST00000608568 PIK3CDO00329 1044 aa5.59□□□□□ -1.51
SSX9-202ENST00000608568 CXCL11O14625 94 aa5.59□□□□□ -1.51
SSX9-202ENST00000608568 FANCGO15287 622 aa5.59□□□□□ -1.51
SSX9-202ENST00000608568 PRC1O43663 620 aa5.59□□□□□ -1.51
SSX9-202ENST00000608568 N4BP1O75113 896 aaKnown RBP5.59□□□□□ -1.51
SSX9-202ENST00000608568 SURF6O75683 361 aaKnown RBP5.59□□□□□ -1.51
SSX9-202ENST00000608568 SMNDC1O75940 238 aaKnown RBP eCLIP5.59□□□□□ -1.51
SSX9-202ENST00000608568 FAM107AO95990 144 aa5.59□□□□□ -1.51
SSX9-202ENST00000608568 SERPINC1P01008 464 aa5.59□□□□□ -1.51
SSX9-202ENST00000608568 SLC3A2P08195 630 aaKnown RBP5.59□□□□□ -1.51
SSX9-202ENST00000608568 VIMP08670 466 aaKnown RBP5.59□□□□□ -1.51
SSX9-202ENST00000608568 CCL5P13501 91 aa5.59□□□□□ -1.51
SSX9-202ENST00000608568 TCF3P15923 654 aa5.59□□□□□ -1.51
SSX9-202ENST00000608568 CNGA1P29973 690 aa5.59□□□□□ -1.51
SSX9-202ENST00000608568 PAPOLAP51003 745 aaKnown RBP5.59□□□□□ -1.51
SSX9-202ENST00000608568 CCNG1P51959 295 aa5.59□□□□□ -1.51
SSX9-202ENST00000608568 ATP8B2P98198 1209 aa5.59□□□□□ -1.51
SSX9-202ENST00000608568 TRIM14Q14142 442 aa5.59□□□□□ -1.51
SSX9-202ENST00000608568 NCAPHQ15003 741 aa5.59□□□□□ -1.51
SSX9-202ENST00000608568 ME3Q16798 604 aa5.59□□□□□ -1.51
SSX9-202ENST00000608568 GLE1Q53GS7 698 aaKnown RBP5.59□□□□□ -1.51
SSX9-202ENST00000608568 TTC39AQ5SRH9 613 aa5.59□□□□□ -1.51
SSX9-202ENST00000608568 C1QTNF12Q5T7M4 302 aa5.59□□□□□ -1.51
SSX9-202ENST00000608568 NUGGCQ68CJ6 796 aa5.59□□□□□ -1.51
SSX9-202ENST00000608568 MIS18BP1Q6P0N0 1132 aa5.59□□□□□ -1.51
SSX9-202ENST00000608568 C6orf89Q6UWU4 347 aa5.59□□□□□ -1.51
SSX9-202ENST00000608568 NOL8Q76FK4 1167 aaKnown RBP5.59□□□□□ -1.51
SSX9-202ENST00000608568 RASGRP2Q7LDG7 609 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms