RNA–Protein interactions for RNA: ENST00000607339.1

UCHL3-205, Transcript of ubiquitin C-terminal hydrolase L3, humanhuman

TSL 2

Gene UCHL3, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL3-205ENST00000607339 TRIM55Q9BYV6 548 aa6.66□□□□□ -1.34
UCHL3-205ENST00000607339 SLITRK6Q9H5Y7 841 aa6.66□□□□□ -1.34
UCHL3-205ENST00000607339 ARHGAP28Q9P2N2 729 aa6.66□□□□□ -1.34
UCHL3-205ENST00000607339 WASF3Q9UPY6 502 aa6.66□□□□□ -1.34
UCHL3-205ENST00000607339 COMTP21964 271 aa6.65□□□□□ -1.34
UCHL3-205ENST00000607339 PAK1Q13153 545 aa6.65□□□□□ -1.34
UCHL3-205ENST00000607339 NEIL1Q96FI4 390 aaPredicted RBP6.65□□□□□ -1.34
UCHL3-205ENST00000607339 FAM89AQ96GI7 184 aa6.65□□□□□ -1.34
UCHL3-205ENST00000607339 LRRC37BQ96QE4 947 aa6.65□□□□□ -1.34
UCHL3-205ENST00000607339 GMLQ99445 158 aa6.65□□□□□ -1.34
UCHL3-205ENST00000607339 ARHGEF4Q9NR80 690 aa6.65□□□□□ -1.34
UCHL3-205ENST00000607339 ST7Q9NRC1 585 aa6.65□□□□□ -1.34
UCHL3-205ENST00000607339 ZFR2Q9UPR6 939 aaKnown RBP6.65□□□□□ -1.34
UCHL3-205ENST00000607339 ETV4P43268 484 aa6.64□□□□□ -1.35
UCHL3-205ENST00000607339 FIGNQ5HY92 759 aa6.64□□□□□ -1.35
UCHL3-205ENST00000607339 SPDYAQ5MJ70 313 aa6.64□□□□□ -1.35
UCHL3-205ENST00000607339 POLNQ7Z5Q5 900 aa6.64□□□□□ -1.35
UCHL3-205ENST00000607339 WDR48Q8TAF3 677 aa6.64□□□□□ -1.35
UCHL3-205ENST00000607339 ZNF341Q9BYN7 854 aa6.64□□□□□ -1.35
UCHL3-205ENST00000607339 SCAND2PQ9GZW5 306 aaPredicted RBP6.64□□□□□ -1.35
UCHL3-205ENST00000607339 RBPJLQ9UBG7 517 aa6.64□□□□□ -1.35
UCHL3-205ENST00000607339 PPARGC1AQ9UBK2 798 aaKnown RBP6.64□□□□□ -1.35
UCHL3-205ENST00000607339 RAD17O75943 681 aa6.63□□□□□ -1.35
UCHL3-205ENST00000607339 AMHP03971 560 aa6.63□□□□□ -1.35
UCHL3-205ENST00000607339 COL6A2P12110 1019 aa6.63□□□□□ -1.35
UCHL3-205ENST00000607339 RPS19P39019 145 aaKnown RBP6.63□□□□□ -1.35
UCHL3-205ENST00000607339 DBPQ10586 325 aaPredicted RBP6.63□□□□□ -1.35
UCHL3-205ENST00000607339 GPR19Q15760 415 aa6.63□□□□□ -1.35
UCHL3-205ENST00000607339 TCTN3Q6NUS6 607 aa6.63□□□□□ -1.35
UCHL3-205ENST00000607339 MTDHQ86UE4 582 aaKnown RBP6.63□□□□□ -1.35
UCHL3-205ENST00000607339 OSBP2Q969R2 916 aa6.63□□□□□ -1.35
UCHL3-205ENST00000607339 ADOQ96SZ5 270 aa6.63□□□□□ -1.35
UCHL3-205ENST00000607339 WNT9AO14904 365 aa6.62□□□□□ -1.35
UCHL3-205ENST00000607339 NKRFO15226 690 aaKnown RBP eCLIP6.62□□□□□ -1.35
UCHL3-205ENST00000607339 SUMO1P63165 101 aaKnown RBP6.62□□□□□ -1.35
UCHL3-205ENST00000607339 ABHD18Q0P651 414 aa6.62□□□□□ -1.35
UCHL3-205ENST00000607339 RAB33AQ14088 237 aa6.62□□□□□ -1.35
UCHL3-205ENST00000607339 WDR72Q3MJ13 1102 aa6.62□□□□□ -1.35
UCHL3-205ENST00000607339 FAM47CQ5HY64 1035 aa6.62□□□□□ -1.35
UCHL3-205ENST00000607339 BTBD8Q5XKL5 378 aa6.62□□□□□ -1.35
UCHL3-205ENST00000607339 KCNT2Q6UVM3 1135 aa6.62□□□□□ -1.35
UCHL3-205ENST00000607339 RNF207Q6ZRF8 634 aa6.62□□□□□ -1.35
UCHL3-205ENST00000607339 GPR155Q7Z3F1 870 aa6.62□□□□□ -1.35
UCHL3-205ENST00000607339 TAX1BP1Q86VP1 789 aa6.62□□□□□ -1.35
UCHL3-205ENST00000607339 SCUBE1Q8IWY4 988 aa6.62□□□□□ -1.35
UCHL3-205ENST00000607339 CKAP2LQ8IYA6 745 aa6.62□□□□□ -1.35
UCHL3-205ENST00000607339 Q8N1X5 172 aa6.62□□□□□ -1.35
UCHL3-205ENST00000607339 CELF2-AS1Q8N7Q2 184 aa6.62□□□□□ -1.35
UCHL3-205ENST00000607339 WWC2-AS2Q96NR7 200 aa6.62□□□□□ -1.35
UCHL3-205ENST00000607339 TACO1Q9BSH4 297 aaKnown RBP6.62□□□□□ -1.35
UCHL3-205ENST00000607339 PCED1AQ9H1Q7 454 aa6.62□□□□□ -1.35
UCHL3-205ENST00000607339 IPPKQ9H8X2 491 aa6.62□□□□□ -1.35
UCHL3-205ENST00000607339 AURKAIP1Q9NWT8 199 aaPredicted RBP6.62□□□□□ -1.35
UCHL3-205ENST00000607339 OAZ3Q9UMX2 235 aa6.62□□□□□ -1.35
UCHL3-205ENST00000607339 SRPK3Q9UPE1 567 aa6.62□□□□□ -1.35
UCHL3-205ENST00000607339 ATP23Q9Y6H3 246 aa6.62□□□□□ -1.35
UCHL3-205ENST00000607339 SLC30A1Q9Y6M5 507 aa6.62□□□□□ -1.35
UCHL3-205ENST00000607339 KLF4O43474 513 aa6.61□□□□□ -1.35
UCHL3-205ENST00000607339 LTFP02788 710 aa6.61□□□□□ -1.35
UCHL3-205ENST00000607339 CR2P20023 1033 aa6.61□□□□□ -1.35
UCHL3-205ENST00000607339 HERVK_113P62684 666 aa6.61□□□□□ -1.35
UCHL3-205ENST00000607339 ST5P78524 1137 aa6.61□□□□□ -1.35
UCHL3-205ENST00000607339 TOP3AQ13472 1001 aaPredicted RBP6.61□□□□□ -1.35
UCHL3-205ENST00000607339 ZFPM1Q8IX07 1006 aa6.61□□□□□ -1.35
UCHL3-205ENST00000607339 PTPRN2Q92932 1015 aa6.61□□□□□ -1.35
UCHL3-205ENST00000607339 FBXW5Q969U6 566 aa6.61□□□□□ -1.35
UCHL3-205ENST00000607339 CDC6Q99741 560 aa6.61□□□□□ -1.35
UCHL3-205ENST00000607339 PTPN18Q99952 460 aa6.61□□□□□ -1.35
UCHL3-205ENST00000607339 RIC8BQ9NVN3 520 aa6.61□□□□□ -1.35
UCHL3-205ENST00000607339 FOXS1O43638 330 aa6.6□□□□□ -1.35
UCHL3-205ENST00000607339 SLPIP03973 132 aa6.6□□□□□ -1.35
UCHL3-205ENST00000607339 PTPN1P18031 435 aaKnown RBP6.6□□□□□ -1.35
UCHL3-205ENST00000607339 NTRK3Q16288 839 aa6.6□□□□□ -1.35
UCHL3-205ENST00000607339 MIIPQ5JXC2 388 aa6.6□□□□□ -1.35
UCHL3-205ENST00000607339 GNRHR2Q96P88 292 aa6.6□□□□□ -1.35
UCHL3-205ENST00000607339 NR2E1Q9Y466 385 aa6.6□□□□□ -1.35
UCHL3-205ENST00000607339 HMGCRP04035 888 aa6.59□□□□□ -1.35
UCHL3-205ENST00000607339 PTGS1P23219 599 aa6.59□□□□□ -1.35
UCHL3-205ENST00000607339 MCM7P33993 719 aa6.59□□□□□ -1.35
UCHL3-205ENST00000607339 TGFB2P61812 414 aa6.59□□□□□ -1.35
UCHL3-205ENST00000607339 FOXE3Q13461 319 aa6.59□□□□□ -1.35
UCHL3-205ENST00000607339 NFYCQ13952 458 aa6.59□□□□□ -1.35
UCHL3-205ENST00000607339 CRY1Q16526 586 aa6.59□□□□□ -1.35
UCHL3-205ENST00000607339 NRN1LQ496H8 165 aa6.59□□□□□ -1.35
UCHL3-205ENST00000607339 ZC3H12BQ5HYM0 836 aaKnown RBP6.59□□□□□ -1.35
UCHL3-205ENST00000607339 PHF19Q5T6S3 580 aa6.59□□□□□ -1.35
UCHL3-205ENST00000607339 NBPF6Q5VWK0 638 aa6.59□□□□□ -1.35
UCHL3-205ENST00000607339 RBM12BQ8IXT5 1001 aaKnown RBP6.59□□□□□ -1.35
UCHL3-205ENST00000607339 NBPF4Q96M43 638 aa6.59□□□□□ -1.35
UCHL3-205ENST00000607339 MENTQ9BUN1 341 aa6.59□□□□□ -1.35
UCHL3-205ENST00000607339 SPATA9Q9BWV2 254 aa6.59□□□□□ -1.35
UCHL3-205ENST00000607339 CATSPERZQ9NTU4 200 aa6.59□□□□□ -1.35
UCHL3-205ENST00000607339 PUF60Q9UHX1 559 aaKnown RBP6.59□□□□□ -1.35
UCHL3-205ENST00000607339 TELO2Q9Y4R8 837 aa6.59□□□□□ -1.35
UCHL3-205ENST00000607339 HS3ST3A1Q9Y663 406 aa6.59□□□□□ -1.35
UCHL3-205ENST00000607339 ESYT3A0FGR9 886 aa6.58□□□□□ -1.36
UCHL3-205ENST00000607339 ACOT7O00154 380 aa6.58□□□□□ -1.36
UCHL3-205ENST00000607339 STK10O94804 968 aaKnown RBP6.58□□□□□ -1.36
UCHL3-205ENST00000607339 IL18BPO95998 194 aa6.58□□□□□ -1.36
UCHL3-205ENST00000607339 GABREP78334 506 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms