RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 ZBED2Q9BTP6 218 aa15.23■□□□□ 0.03
CTSA-213ENST00000606782 ANO3Q9BYT9 981 aa15.23■□□□□ 0.03
CTSA-213ENST00000606782 OSBPL7Q9BZF2 842 aa15.23■□□□□ 0.03
CTSA-213ENST00000606782 ZMYND12Q9H0C1 365 aa15.23■□□□□ 0.03
CTSA-213ENST00000606782 CERS4Q9HA82 394 aa15.23■□□□□ 0.03
CTSA-213ENST00000606782 JPH1Q9HDC5 661 aaPredicted RBP15.23■□□□□ 0.03
CTSA-213ENST00000606782 PRPF3O43395 683 aaKnown RBP15.22■□□□□ 0.03
CTSA-213ENST00000606782 GTPBP6O43824 516 aaPredicted RBP15.22■□□□□ 0.03
CTSA-213ENST00000606782 ATG7O95352 703 aa15.22■□□□□ 0.03
CTSA-213ENST00000606782 AMHP03971 560 aa15.22■□□□□ 0.03
CTSA-213ENST00000606782 CYP3A4P08684 503 aa15.22■□□□□ 0.03
CTSA-213ENST00000606782 ARP10275 920 aa15.22■□□□□ 0.03
CTSA-213ENST00000606782 SCG2P13521 617 aa15.22■□□□□ 0.03
CTSA-213ENST00000606782 AK2P54819 239 aa15.22■□□□□ 0.03
CTSA-213ENST00000606782 APOBRQ0VD83 1088 aa15.22■□□□□ 0.03
CTSA-213ENST00000606782 PPFIA1Q13136 1202 aa15.22■□□□□ 0.03
CTSA-213ENST00000606782 CCDC85BQ15834 202 aaPredicted RBP15.22■□□□□ 0.03
CTSA-213ENST00000606782 PKN1Q16512 942 aa15.22■□□□□ 0.03
CTSA-213ENST00000606782 MCTP2Q6DN12 878 aa15.22■□□□□ 0.03
CTSA-213ENST00000606782 SPRED2Q7Z698 418 aa15.22■□□□□ 0.03
CTSA-213ENST00000606782 SP7Q8TDD2 431 aaPredicted RBP15.22■□□□□ 0.03
CTSA-213ENST00000606782 ARNTL2Q8WYA1 636 aa15.22■□□□□ 0.03
CTSA-213ENST00000606782 APBB2Q92870 758 aa15.22■□□□□ 0.03
CTSA-213ENST00000606782 ZNF274Q96GC6 653 aaPredicted RBP15.22■□□□□ 0.03
CTSA-213ENST00000606782 ASB2Q96Q27 587 aa15.22■□□□□ 0.03
CTSA-213ENST00000606782 LMCD1Q9NZU5 365 aa15.22■□□□□ 0.03
CTSA-213ENST00000606782 SLC9A2Q9UBY0 812 aa15.22■□□□□ 0.03
CTSA-213ENST00000606782 INSL6Q9Y581 213 aa15.22■□□□□ 0.03
CTSA-213ENST00000606782 BDP1A6H8Y1 2624 aa15.21■□□□□ 0.03
CTSA-213ENST00000606782 BRWD1Q9NSI6 2320 aa15.21■□□□□ 0.03
CTSA-213ENST00000606782 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.21■□□□□ 0.03
CTSA-213ENST00000606782 LINC01553A4QN01 128 aa15.21■□□□□ 0.03
CTSA-213ENST00000606782 RRN3P2A6NIE6 340 aa15.21■□□□□ 0.03
CTSA-213ENST00000606782 CHRNA1P02708 482 aa15.21■□□□□ 0.03
CTSA-213ENST00000606782 RPLP2P05387 115 aaKnown RBP15.21■□□□□ 0.03
CTSA-213ENST00000606782 PDIA3P30101 505 aaKnown RBP15.21■□□□□ 0.03
CTSA-213ENST00000606782 MRPS5P82675 430 aaKnown RBP15.21■□□□□ 0.03
CTSA-213ENST00000606782 MGAT3Q09327 533 aa15.21■□□□□ 0.03
CTSA-213ENST00000606782 GRB10Q13322 594 aa15.21■□□□□ 0.03
CTSA-213ENST00000606782 ITGB3BPQ13352 177 aaPredicted RBP15.21■□□□□ 0.03
CTSA-213ENST00000606782 GRIK4Q16099 956 aa15.21■□□□□ 0.03
CTSA-213ENST00000606782 NTRK3Q16288 839 aa15.21■□□□□ 0.03
CTSA-213ENST00000606782 PLPPR4Q7Z2D5 763 aa15.21■□□□□ 0.03
CTSA-213ENST00000606782 GLG1Q92896 1179 aa15.21■□□□□ 0.03
CTSA-213ENST00000606782 TOP1MTQ969P6 601 aa15.21■□□□□ 0.03
CTSA-213ENST00000606782 AGO4Q9HCK5 861 aaKnown RBP15.21■□□□□ 0.03
CTSA-213ENST00000606782 PKD2L1Q9P0L9 805 aa15.21■□□□□ 0.03
CTSA-213ENST00000606782 IGKV6D-21A0A0A0MT36 114 aa15.2■□□□□ 0.02
CTSA-213ENST00000606782 CTSHP09668 335 aa15.2■□□□□ 0.02
CTSA-213ENST00000606782 ACTR2P61160 394 aa15.2■□□□□ 0.02
CTSA-213ENST00000606782 RUFY4Q6ZNE9 571 aa15.2■□□□□ 0.02
CTSA-213ENST00000606782 TNPO1Q92973 898 aaKnown RBP15.2■□□□□ 0.02
CTSA-213ENST00000606782 PGBD1Q96JS3 809 aa15.2■□□□□ 0.02
CTSA-213ENST00000606782 TGS1Q96RS0 853 aaKnown RBP15.2■□□□□ 0.02
CTSA-213ENST00000606782 SDF4Q9BRK5 362 aa15.2■□□□□ 0.02
CTSA-213ENST00000606782 TSPYL2Q9H2G4 693 aaPredicted RBP15.2■□□□□ 0.02
CTSA-213ENST00000606782 SUGCTQ9HAC7 445 aa15.2■□□□□ 0.02
CTSA-213ENST00000606782 TMEM260Q9NX78 707 aa15.2■□□□□ 0.02
CTSA-213ENST00000606782 TUBE1Q9UJT0 475 aa15.2■□□□□ 0.02
CTSA-213ENST00000606782 IGLV3-22A0A075B6J6 115 aa15.19■□□□□ 0.02
CTSA-213ENST00000606782 FAM86B1E9PN63 330 aa15.19■□□□□ 0.02
CTSA-213ENST00000606782 RBAK-RBAKDNI3L0D1 243 aa15.19■□□□□ 0.02
CTSA-213ENST00000606782 DHX15O43143 795 aaKnown RBP15.19■□□□□ 0.02
CTSA-213ENST00000606782 FAM86B2P0C5J1 330 aa15.19■□□□□ 0.02
CTSA-213ENST00000606782 INSRRP14616 1297 aa15.19■□□□□ 0.02
CTSA-213ENST00000606782 IFNAR1P17181 557 aa15.19■□□□□ 0.02
CTSA-213ENST00000606782 MARK3P27448 753 aa15.19■□□□□ 0.02
CTSA-213ENST00000606782 SLC26A2P50443 739 aa15.19■□□□□ 0.02
CTSA-213ENST00000606782 RSPH3Q86UC2 560 aa15.19■□□□□ 0.02
CTSA-213ENST00000606782 MYOCDQ8IZQ8 938 aa15.19■□□□□ 0.02
CTSA-213ENST00000606782 CCDC12Q8WUD4 166 aaPredicted RBP15.19■□□□□ 0.02
CTSA-213ENST00000606782 LARP6Q9BRS8 491 aaKnown RBP15.19■□□□□ 0.02
CTSA-213ENST00000606782 RNF26Q9BY78 433 aaPredicted RBP15.19■□□□□ 0.02
CTSA-213ENST00000606782 IFIH1Q9BYX4 1025 aaKnown RBP15.19■□□□□ 0.02
CTSA-213ENST00000606782 AZI2Q9H6S1 392 aa15.19■□□□□ 0.02
CTSA-213ENST00000606782 TPCN1Q9ULQ1 816 aa15.19■□□□□ 0.02
CTSA-213ENST00000606782 SQORQ9Y6N5 450 aa15.19■□□□□ 0.02
CTSA-213ENST00000606782 COL4A6Q14031 1691 aa15.19■□□□□ 0.02
CTSA-213ENST00000606782 ST18O60284 1047 aa15.18■□□□□ 0.02
CTSA-213ENST00000606782 GNA11P29992 359 aa15.18■□□□□ 0.02
CTSA-213ENST00000606782 STAT5BP51692 787 aa15.18■□□□□ 0.02
CTSA-213ENST00000606782 PLCB4Q15147 1175 aa15.18■□□□□ 0.02
CTSA-213ENST00000606782 JAKMIP3Q5VZ66 844 aa15.18■□□□□ 0.02
CTSA-213ENST00000606782 KRT40Q6A162 431 aa15.18■□□□□ 0.02
CTSA-213ENST00000606782 FAM117BQ6P1L5 589 aa15.18■□□□□ 0.02
CTSA-213ENST00000606782 ABHD15Q6UXT9 468 aa15.18■□□□□ 0.02
CTSA-213ENST00000606782 C6orf50Q9HD87 102 aa15.18■□□□□ 0.02
CTSA-213ENST00000606782 NAP1L2Q9ULW6 460 aaPredicted RBP15.18■□□□□ 0.02
CTSA-213ENST00000606782 COG5Q9UP83 839 aa15.18■□□□□ 0.02
CTSA-213ENST00000606782 PCDHA2Q9Y5H9 948 aa15.18■□□□□ 0.02
CTSA-213ENST00000606782 ADAMTS3O15072 1205 aa15.17■□□□□ 0.02
CTSA-213ENST00000606782 CCNE2O96020 404 aa15.17■□□□□ 0.02
CTSA-213ENST00000606782 BMP1P13497 986 aa15.17■□□□□ 0.02
CTSA-213ENST00000606782 CIITAP33076 1130 aa15.17■□□□□ 0.02
CTSA-213ENST00000606782 ZNF76P36508 570 aa15.17■□□□□ 0.02
CTSA-213ENST00000606782 LPIN1Q14693 890 aa15.17■□□□□ 0.02
CTSA-213ENST00000606782 FBXO47Q5MNV8 452 aa15.17■□□□□ 0.02
CTSA-213ENST00000606782 FAM43BQ6ZT52 329 aaPredicted RBP15.17■□□□□ 0.02
CTSA-213ENST00000606782 PLA2G4DQ86XP0 818 aa15.17■□□□□ 0.02
CTSA-213ENST00000606782 REXO1Q8N1G1 1221 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms