RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 SESTD1Q86VW0 696 aa16.09■□□□□ 0.17
CTSA-211ENST00000606066 SPRYD3Q8NCJ5 442 aa16.09■□□□□ 0.17
CTSA-211ENST00000606066 GUCD1Q96NT3 240 aa16.09■□□□□ 0.17
CTSA-211ENST00000606066 PRKAG2Q9UGJ0 569 aa16.09■□□□□ 0.17
CTSA-211ENST00000606066 TELO2Q9Y4R8 837 aa16.09■□□□□ 0.17
CTSA-211ENST00000606066 GRIN2DO15399 1336 aa16.09■□□□□ 0.17
CTSA-211ENST00000606066 EMSYQ7Z589 1322 aa16.09■□□□□ 0.17
CTSA-211ENST00000606066 IGKV6D-21A0A0A0MT36 114 aa16.08■□□□□ 0.16
CTSA-211ENST00000606066 CHMP2AO43633 222 aa16.08■□□□□ 0.16
CTSA-211ENST00000606066 HAS1Q92839 578 aa16.08■□□□□ 0.16
CTSA-211ENST00000606066 GJA10Q969M2 543 aa16.08■□□□□ 0.16
CTSA-211ENST00000606066 UNC45AQ9H3U1 944 aa16.08■□□□□ 0.16
CTSA-211ENST00000606066 ZSCAN16Q9H4T2 348 aaPredicted RBP16.08■□□□□ 0.16
CTSA-211ENST00000606066 ZNF302Q9NR11 478 aa16.08■□□□□ 0.16
CTSA-211ENST00000606066 DISC1Q9NRI5 854 aa16.08■□□□□ 0.16
CTSA-211ENST00000606066 PCDHA12Q9UN75 941 aa16.08■□□□□ 0.16
CTSA-211ENST00000606066 MTMR6Q9Y217 621 aa16.08■□□□□ 0.16
CTSA-211ENST00000606066 MYH7BA7E2Y1 1941 aa16.07■□□□□ 0.16
CTSA-211ENST00000606066 WNT7AO00755 349 aa16.07■□□□□ 0.16
CTSA-211ENST00000606066 GNAT1P11488 350 aa16.07■□□□□ 0.16
CTSA-211ENST00000606066 TOB1P50616 345 aaPredicted RBP16.07■□□□□ 0.16
CTSA-211ENST00000606066 PPP2R5CQ13362 524 aa16.07■□□□□ 0.16
CTSA-211ENST00000606066 SWSAP1Q6NVH7 229 aa16.07■□□□□ 0.16
CTSA-211ENST00000606066 MIER3Q7Z3K6 550 aa16.07■□□□□ 0.16
CTSA-211ENST00000606066 TRIM50Q86XT4 487 aa16.07■□□□□ 0.16
CTSA-211ENST00000606066 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.07■□□□□ 0.16
CTSA-211ENST00000606066 FAM126BQ8IXS8 530 aa16.07■□□□□ 0.16
CTSA-211ENST00000606066 AFAP1L1Q8TED9 768 aa16.07■□□□□ 0.16
CTSA-211ENST00000606066 MTMR9Q96QG7 549 aa16.07■□□□□ 0.16
CTSA-211ENST00000606066 COL25A1Q9BXS0 654 aaPredicted RBP16.07■□□□□ 0.16
CTSA-211ENST00000606066 NOD1Q9Y239 953 aa16.07■□□□□ 0.16
CTSA-211ENST00000606066 LAD1O00515 517 aa16.06■□□□□ 0.16
CTSA-211ENST00000606066 CLTBP09497 229 aa16.06■□□□□ 0.16
CTSA-211ENST00000606066 OR52Z1P0C646 297 aa16.06■□□□□ 0.16
CTSA-211ENST00000606066 TXKP42681 527 aa16.06■□□□□ 0.16
CTSA-211ENST00000606066 PDXDC2PQ6P474 469 aa16.06■□□□□ 0.16
CTSA-211ENST00000606066 B3GNT9Q6UX72 402 aa16.06■□□□□ 0.16
CTSA-211ENST00000606066 FERMT3Q86UX7 667 aa16.06■□□□□ 0.16
CTSA-211ENST00000606066 PCYT2Q99447 389 aa16.06■□□□□ 0.16
CTSA-211ENST00000606066 TTC12Q9H892 705 aaPredicted RBP16.06■□□□□ 0.16
CTSA-211ENST00000606066 TMEM39AQ9NV64 488 aa16.06■□□□□ 0.16
CTSA-211ENST00000606066 HDAC6Q9UBN7 1215 aa16.06■□□□□ 0.16
CTSA-211ENST00000606066 GTF2IRD1Q9UHL9 959 aa16.06■□□□□ 0.16
CTSA-211ENST00000606066 VAV3Q9UKW4 847 aa16.06■□□□□ 0.16
CTSA-211ENST00000606066 PCDHB6Q9Y5E3 794 aa16.06■□□□□ 0.16
CTSA-211ENST00000606066 ALPK3Q96L96 1907 aa16.06■□□□□ 0.16
CTSA-211ENST00000606066 NRCAMQ92823 1304 aa16.05■□□□□ 0.16
CTSA-211ENST00000606066 C17orf102A2RUQ5 167 aa16.05■□□□□ 0.16
CTSA-211ENST00000606066 B4GALT4O60513 344 aa16.05■□□□□ 0.16
CTSA-211ENST00000606066 DKC1O60832 514 aaKnown RBP eCLIP16.05■□□□□ 0.16
CTSA-211ENST00000606066 CD4P01730 458 aa16.05■□□□□ 0.16
CTSA-211ENST00000606066 SMIM10L2AP0DMW4 78 aa16.05■□□□□ 0.16
CTSA-211ENST00000606066 SMIM10L2BP0DMW5 78 aa16.05■□□□□ 0.16
CTSA-211ENST00000606066 MARK3P27448 753 aa16.05■□□□□ 0.16
CTSA-211ENST00000606066 FAAP100Q0VG06 881 aa16.05■□□□□ 0.16
CTSA-211ENST00000606066 SHHQ15465 462 aa16.05■□□□□ 0.16
CTSA-211ENST00000606066 TMEM266Q2M3C6 531 aa16.05■□□□□ 0.16
CTSA-211ENST00000606066 CCDC60Q8IWA6 550 aaPredicted RBP16.05■□□□□ 0.16
CTSA-211ENST00000606066 CKAP2LQ8IYA6 745 aa16.05■□□□□ 0.16
CTSA-211ENST00000606066 ATP6V0A1Q93050 837 aa16.05■□□□□ 0.16
CTSA-211ENST00000606066 TMEM60Q9H2L4 133 aa16.05■□□□□ 0.16
CTSA-211ENST00000606066 SEMA6BQ9H3T3 888 aa16.05■□□□□ 0.16
CTSA-211ENST00000606066 RNPEPQ9H4A4 650 aa16.05■□□□□ 0.16
CTSA-211ENST00000606066 PRDM5Q9NQX1 630 aaPredicted RBP16.05■□□□□ 0.16
CTSA-211ENST00000606066 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.05■□□□□ 0.16
CTSA-211ENST00000606066 GABBR1Q9UBS5 961 aa16.05■□□□□ 0.16
CTSA-211ENST00000606066 CEP131Q9UPN4 1083 aa16.05■□□□□ 0.16
CTSA-211ENST00000606066 MAFBQ9Y5Q3 323 aaPredicted RBP16.05■□□□□ 0.16
CTSA-211ENST00000606066 SPTBN5Q9NRC6 3674 aaKnown RBP16.05■□□□□ 0.16
CTSA-211ENST00000606066 BMP15O95972 392 aa16.04■□□□□ 0.16
CTSA-211ENST00000606066 RESTQ13127 1097 aa16.04■□□□□ 0.16
CTSA-211ENST00000606066 PTGDRQ13258 359 aa16.04■□□□□ 0.16
CTSA-211ENST00000606066 NBR1Q14596 966 aa16.04■□□□□ 0.16
CTSA-211ENST00000606066 EPHA7Q15375 998 aa16.04■□□□□ 0.16
CTSA-211ENST00000606066 PTGISQ16647 500 aa16.04■□□□□ 0.16
CTSA-211ENST00000606066 ZNF697Q5TEC3 545 aa16.04■□□□□ 0.16
CTSA-211ENST00000606066 NCAPH2Q6IBW4 605 aa16.04■□□□□ 0.16
CTSA-211ENST00000606066 FAM167AQ96KS9 214 aa16.04■□□□□ 0.16
CTSA-211ENST00000606066 RAB34Q9BZG1 259 aa16.04■□□□□ 0.16
CTSA-211ENST00000606066 TRPV6Q9H1D0 765 aa16.04■□□□□ 0.16
CTSA-211ENST00000606066 TRMT13Q9NUP7 481 aaKnown RBP16.04■□□□□ 0.16
CTSA-211ENST00000606066 DAXXQ9UER7 740 aaPredicted RBP16.04■□□□□ 0.16
CTSA-211ENST00000606066 TRPC6Q9Y210 931 aa16.04■□□□□ 0.16
CTSA-211ENST00000606066 POTEB3A0JP26 581 aa16.03■□□□□ 0.16
CTSA-211ENST00000606066 RRN3P2A6NIE6 340 aa16.03■□□□□ 0.16
CTSA-211ENST00000606066 HBP1O60381 514 aa16.03■□□□□ 0.16
CTSA-211ENST00000606066 P4HBP07237 508 aaKnown RBP16.03■□□□□ 0.16
CTSA-211ENST00000606066 ZSCAN22P10073 491 aaPredicted RBP16.03■□□□□ 0.16
CTSA-211ENST00000606066 ANP32AP39687 249 aaKnown RBP16.03■□□□□ 0.16
CTSA-211ENST00000606066 PRPHP41219 470 aa16.03■□□□□ 0.16
CTSA-211ENST00000606066 SMAD3P84022 425 aaKnown RBP16.03■□□□□ 0.16
CTSA-211ENST00000606066 PPFIA1Q13136 1202 aa16.03■□□□□ 0.16
CTSA-211ENST00000606066 PLCB4Q15147 1175 aa16.03■□□□□ 0.16
CTSA-211ENST00000606066 GDF6Q6KF10 455 aaPredicted RBP16.03■□□□□ 0.16
CTSA-211ENST00000606066 POTEBQ6S5H4 581 aa16.03■□□□□ 0.16
CTSA-211ENST00000606066 C4orf32Q8N8J7 132 aa16.03■□□□□ 0.16
CTSA-211ENST00000606066 ATP8B4Q8TF62 1192 aa16.03■□□□□ 0.16
CTSA-211ENST00000606066 PPP1R13LQ8WUF5 828 aa16.03■□□□□ 0.16
CTSA-211ENST00000606066 BBXQ8WY36 941 aaPredicted RBP16.03■□□□□ 0.16
CTSA-211ENST00000606066 CDX2Q99626 313 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms