RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 MMTAG2Q9BU76 263 aaKnown RBP16.83■□□□□ 0.28
RER1-209ENST00000605895 EBF2Q9HAK2 575 aa16.83■□□□□ 0.28
RER1-209ENST00000605895 RNF14Q9UBS8 474 aa16.83■□□□□ 0.28
RER1-209ENST00000605895 UTP11Q9Y3A2 253 aaKnown RBP16.83■□□□□ 0.28
RER1-209ENST00000605895 OR52Z1P0C646 297 aa16.83■□□□□ 0.28
RER1-209ENST00000605895 FGFR2P21802 821 aa16.83■□□□□ 0.28
RER1-209ENST00000605895 ABL2P42684 1182 aa16.83■□□□□ 0.28
RER1-209ENST00000605895 SLC35G1Q2M3R5 365 aa16.83■□□□□ 0.28
RER1-209ENST00000605895 SEPT14Q6ZU15 432 aa16.83■□□□□ 0.28
RER1-209ENST00000605895 ZNF571Q7Z3V5 609 aaPredicted RBP16.83■□□□□ 0.28
RER1-209ENST00000605895 SPIRE2Q8WWL2 714 aa16.83■□□□□ 0.28
RER1-209ENST00000605895 OSGEPQ9NPF4 335 aa16.83■□□□□ 0.28
RER1-209ENST00000605895 NQO1P15559 274 aaKnown RBP16.82■□□□□ 0.28
RER1-209ENST00000605895 CALML3P27482 149 aa16.82■□□□□ 0.28
RER1-209ENST00000605895 TFAP4Q01664 338 aa16.82■□□□□ 0.28
RER1-209ENST00000605895 TAF11Q15544 211 aa16.82■□□□□ 0.28
RER1-209ENST00000605895 MIS18BP1Q6P0N0 1132 aa16.82■□□□□ 0.28
RER1-209ENST00000605895 CALML4Q96GE6 196 aa16.82■□□□□ 0.28
RER1-209ENST00000605895 CCSER1Q9C0I3 900 aa16.82■□□□□ 0.28
RER1-209ENST00000605895 SEMA4AQ9H3S1 761 aa16.82■□□□□ 0.28
RER1-209ENST00000605895 PIDD1Q9HB75 910 aa16.82■□□□□ 0.28
RER1-209ENST00000605895 SEPT11Q9NVA2 429 aaKnown RBP16.82■□□□□ 0.28
RER1-209ENST00000605895 CPSF2Q9P2I0 782 aaKnown RBP16.82■□□□□ 0.28
RER1-209ENST00000605895 SWAP70Q9UH65 585 aa16.82■□□□□ 0.28
RER1-209ENST00000605895 ZMYND8Q9ULU4 1186 aaPredicted RBP16.82■□□□□ 0.28
RER1-209ENST00000605895 PCDHGC5Q9Y5F6 944 aa16.82■□□□□ 0.28
RER1-209ENST00000605895 NID2Q14112 1375 aa16.82■□□□□ 0.28
RER1-209ENST00000605895 CALRP27797 417 aaKnown RBP16.82■□□□□ 0.28
RER1-209ENST00000605895 NAPAP54920 295 aa16.82■□□□□ 0.28
RER1-209ENST00000605895 TNIP1Q15025 636 aa16.82■□□□□ 0.28
RER1-209ENST00000605895 TCERG1LQ5VWI1 586 aa16.82■□□□□ 0.28
RER1-209ENST00000605895 GIGYF2Q6Y7W6 1299 aaKnown RBP16.82■□□□□ 0.28
RER1-209ENST00000605895 LRRC55Q6ZSA7 311 aa16.82■□□□□ 0.28
RER1-209ENST00000605895 SLC44A5Q8NCS7 719 aa16.82■□□□□ 0.28
RER1-209ENST00000605895 SCFD2Q8WU76 684 aa16.82■□□□□ 0.28
RER1-209ENST00000605895 DDX12PQ92771 950 aa16.82■□□□□ 0.28
RER1-209ENST00000605895 KCNK9Q9NPC2 374 aa16.82■□□□□ 0.28
RER1-209ENST00000605895 BCS1LQ9Y276 419 aa16.82■□□□□ 0.28
RER1-209ENST00000605895 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.82■□□□□ 0.28
RER1-209ENST00000605895 SPEF2Q9C093 1822 aa16.81■□□□□ 0.28
RER1-209ENST00000605895 TCP11X1B4DZS4 312 aa16.81■□□□□ 0.28
RER1-209ENST00000605895 USP17L8P0C7I0 530 aa16.81■□□□□ 0.28
RER1-209ENST00000605895 CALM1P0DP23 149 aa16.81■□□□□ 0.28
RER1-209ENST00000605895 CALM2P0DP24 149 aa16.81■□□□□ 0.28
RER1-209ENST00000605895 CALM3P0DP25 149 aa16.81■□□□□ 0.28
RER1-209ENST00000605895 SLC8A3P57103 927 aa16.81■□□□□ 0.28
RER1-209ENST00000605895 NCALDP61601 193 aa16.81■□□□□ 0.28
RER1-209ENST00000605895 RCSD1Q6JBY9 416 aa16.81■□□□□ 0.28
RER1-209ENST00000605895 PNMA1Q8ND90 353 aa16.81■□□□□ 0.28
RER1-209ENST00000605895 RNF25Q96BH1 459 aaPredicted RBP16.81■□□□□ 0.28
RER1-209ENST00000605895 ZNF512BQ96KM6 892 aaPredicted RBP16.81■□□□□ 0.28
RER1-209ENST00000605895 LUC7LQ9NQ29 371 aaKnown RBP16.81■□□□□ 0.28
RER1-209ENST00000605895 SIPA1L3O60292 1781 aaPredicted RBP16.81■□□□□ 0.28
RER1-209ENST00000605895 SSU72P8A0A1W2PR75 194 aa16.81■□□□□ 0.28
RER1-209ENST00000605895 CYTH3O43739 400 aa16.81■□□□□ 0.28
RER1-209ENST00000605895 MYBP10242 640 aa16.81■□□□□ 0.28
RER1-209ENST00000605895 ANKRD20A2Q5SQ80 823 aa16.81■□□□□ 0.28
RER1-209ENST00000605895 ANKRD20A1Q5TYW2 823 aa16.81■□□□□ 0.28
RER1-209ENST00000605895 ANKRD20A3Q5VUR7 823 aa16.81■□□□□ 0.28
RER1-209ENST00000605895 NUGGCQ68CJ6 796 aa16.81■□□□□ 0.28
RER1-209ENST00000605895 FBXO25Q8TCJ0 367 aa16.81■□□□□ 0.28
RER1-209ENST00000605895 MAGEC3Q8TD91 643 aa16.81■□□□□ 0.28
RER1-209ENST00000605895 L3MBTL3Q96JM7 780 aaPredicted RBP16.81■□□□□ 0.28
RER1-209ENST00000605895 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.81■□□□□ 0.28
RER1-209ENST00000605895 OSBPL1AQ9BXW6 950 aa16.81■□□□□ 0.28
RER1-209ENST00000605895 SLC12A4Q9UP95 1085 aa16.81■□□□□ 0.28
RER1-209ENST00000605895 PTPN22Q9Y2R2 807 aa16.81■□□□□ 0.28
RER1-209ENST00000605895 PNPLA7Q6ZV29 1317 aa16.81■□□□□ 0.28
RER1-209ENST00000605895 CHD4Q14839 1912 aa16.81■□□□□ 0.28
RER1-209ENST00000605895 RARAP10276 462 aa16.8■□□□□ 0.28
RER1-209ENST00000605895 DCAF17Q5H9S7 520 aaPredicted RBP16.8■□□□□ 0.28
RER1-209ENST00000605895 AGBL2Q5U5Z8 902 aa16.8■□□□□ 0.28
RER1-209ENST00000605895 ALKBH5Q6P6C2 394 aaKnown RBP16.8■□□□□ 0.28
RER1-209ENST00000605895 MAB21L3Q8N8X9 362 aa16.8■□□□□ 0.28
RER1-209ENST00000605895 U2AF1L4Q8WU68 220 aaKnown RBP16.8■□□□□ 0.28
RER1-209ENST00000605895 C7orf25Q9BPX7 421 aa16.8■□□□□ 0.28
RER1-209ENST00000605895 ERVK-5Q9HDB9 667 aa16.8■□□□□ 0.28
RER1-209ENST00000605895 TMOD4Q9NZQ9 345 aa16.8■□□□□ 0.28
RER1-209ENST00000605895 TMEM110-MUSTN1A8MSY1 372 aa16.8■□□□□ 0.28
RER1-209ENST00000605895 PDE8AO60658 829 aa16.8■□□□□ 0.28
RER1-209ENST00000605895 TUBP50607 506 aa16.8■□□□□ 0.28
RER1-209ENST00000605895 AMPD3Q01432 767 aa16.8■□□□□ 0.28
RER1-209ENST00000605895 PPP2R5BQ15173 497 aa16.8■□□□□ 0.28
RER1-209ENST00000605895 ZMYND12Q9H0C1 365 aa16.8■□□□□ 0.28
RER1-209ENST00000605895 ADAM7Q9H2U9 754 aa16.8■□□□□ 0.28
RER1-209ENST00000605895 BLOC1S4Q9NUP1 217 aa16.8■□□□□ 0.28
RER1-209ENST00000605895 IRAK4Q9NWZ3 460 aa16.8■□□□□ 0.28
RER1-209ENST00000605895 TMEM59LQ9UK28 342 aa16.8■□□□□ 0.28
RER1-209ENST00000605895 SMNDC1O75940 238 aaKnown RBP eCLIP16.8■□□□□ 0.284e-8■■■□□ 16.4
RER1-209ENST00000605895 DDAH1O94760 285 aa16.8■□□□□ 0.28
RER1-209ENST00000605895 USP11P51784 963 aa16.8■□□□□ 0.28
RER1-209ENST00000605895 SESN3P58005 492 aa16.8■□□□□ 0.28
RER1-209ENST00000605895 DENND2CQ68D51 928 aa16.8■□□□□ 0.28
RER1-209ENST00000605895 TBCKQ8TEA7 893 aa16.8■□□□□ 0.28
RER1-209ENST00000605895 ATXN2LQ8WWM7 1075 aaKnown RBP16.8■□□□□ 0.28
RER1-209ENST00000605895 RIOK1Q9BRS2 568 aaKnown RBP16.8■□□□□ 0.28
RER1-209ENST00000605895 MCM9Q9NXL9 1143 aa16.8■□□□□ 0.28
RER1-209ENST00000605895 CEP72Q9P209 647 aa16.8■□□□□ 0.28
RER1-209ENST00000605895 NKX1-2Q9UD57 310 aaPredicted RBP16.8■□□□□ 0.28
RER1-209ENST00000605895 ZBTB1Q9Y2K1 713 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms