RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 RRN3P2A6NIE6 340 aa10.66□□□□□ -0.7
SQSTM1P1-201ENST00000603451 WNT7AO00755 349 aa10.66□□□□□ -0.7
SQSTM1P1-201ENST00000603451 BACH1O14867 736 aa10.66□□□□□ -0.7
SQSTM1P1-201ENST00000603451 CAND2O75155 1236 aa10.66□□□□□ -0.7
SQSTM1P1-201ENST00000603451 YEATS4O95619 227 aa10.66□□□□□ -0.7
SQSTM1P1-201ENST00000603451 PTGS1P23219 599 aa10.66□□□□□ -0.7
SQSTM1P1-201ENST00000603451 DDIT3P35638 169 aa10.66□□□□□ -0.7
SQSTM1P1-201ENST00000603451 NASPP49321 788 aaPredicted RBP10.66□□□□□ -0.7
SQSTM1P1-201ENST00000603451 SP4Q02446 784 aa10.66□□□□□ -0.7
SQSTM1P1-201ENST00000603451 RBL2Q08999 1139 aa10.66□□□□□ -0.7
SQSTM1P1-201ENST00000603451 PTGDRQ13258 359 aa10.66□□□□□ -0.7
SQSTM1P1-201ENST00000603451 EPHA7Q15375 998 aa10.66□□□□□ -0.7
SQSTM1P1-201ENST00000603451 FAM43BQ6ZT52 329 aaPredicted RBP10.66□□□□□ -0.7
SQSTM1P1-201ENST00000603451 FERMT3Q86UX7 667 aa10.66□□□□□ -0.7
SQSTM1P1-201ENST00000603451 CCDC60Q8IWA6 550 aaPredicted RBP10.66□□□□□ -0.7
SQSTM1P1-201ENST00000603451 FAM126BQ8IXS8 530 aa10.66□□□□□ -0.7
SQSTM1P1-201ENST00000603451 CCDC155Q8N6L0 562 aa10.66□□□□□ -0.7
SQSTM1P1-201ENST00000603451 C7orf31Q8N865 590 aa10.66□□□□□ -0.7
SQSTM1P1-201ENST00000603451 C4orf32Q8N8J7 132 aa10.66□□□□□ -0.7
SQSTM1P1-201ENST00000603451 IGSF22Q8N9C0 903 aa10.66□□□□□ -0.7
SQSTM1P1-201ENST00000603451 ATP8B4Q8TF62 1192 aa10.66□□□□□ -0.7
SQSTM1P1-201ENST00000603451 BBXQ8WY36 941 aaPredicted RBP10.66□□□□□ -0.7
SQSTM1P1-201ENST00000603451 FERMT2Q96AC1 680 aa10.66□□□□□ -0.7
SQSTM1P1-201ENST00000603451 BCAS3Q9H6U6 928 aa10.66□□□□□ -0.7
SQSTM1P1-201ENST00000603451 KDM3AQ9Y4C1 1321 aa10.65□□□□□ -0.7
SQSTM1P1-201ENST00000603451 DDX39AO00148 427 aaKnown RBP10.65□□□□□ -0.7
SQSTM1P1-201ENST00000603451 PITPNM1O00562 1244 aa10.65□□□□□ -0.7
SQSTM1P1-201ENST00000603451 HBP1O60381 514 aa10.65□□□□□ -0.7
SQSTM1P1-201ENST00000603451 LYPLA2O95372 231 aa10.65□□□□□ -0.7
SQSTM1P1-201ENST00000603451 CD4P01730 458 aa10.65□□□□□ -0.7
SQSTM1P1-201ENST00000603451 P4HBP07237 508 aaKnown RBP10.65□□□□□ -0.7
SQSTM1P1-201ENST00000603451 ATP2B1P20020 1258 aa10.65□□□□□ -0.7
SQSTM1P1-201ENST00000603451 TXKP42681 527 aa10.65□□□□□ -0.7
SQSTM1P1-201ENST00000603451 QARSP47897 775 aaKnown RBP10.65□□□□□ -0.7
SQSTM1P1-201ENST00000603451 RTP1P59025 263 aa10.65□□□□□ -0.7
SQSTM1P1-201ENST00000603451 PSMC5P62195 406 aa10.65□□□□□ -0.7
SQSTM1P1-201ENST00000603451 IRX5P78411 483 aaPredicted RBP10.65□□□□□ -0.7
SQSTM1P1-201ENST00000603451 ZNF174Q15697 407 aa10.65□□□□□ -0.7
SQSTM1P1-201ENST00000603451 NBPF20Q3BBV1 942 aa10.65□□□□□ -0.7
SQSTM1P1-201ENST00000603451 PDXDC2PQ6P474 469 aa10.65□□□□□ -0.7
SQSTM1P1-201ENST00000603451 DTHD1Q6ZMT9 781 aa10.65□□□□□ -0.7
SQSTM1P1-201ENST00000603451 EXOC8Q8IYI6 725 aa10.65□□□□□ -0.7
SQSTM1P1-201ENST00000603451 ZNF710Q8N1W2 664 aa10.65□□□□□ -0.7
SQSTM1P1-201ENST00000603451 VTI1AQ96AJ9 217 aa10.65□□□□□ -0.7
SQSTM1P1-201ENST00000603451 PCYT2Q99447 389 aa10.65□□□□□ -0.7
SQSTM1P1-201ENST00000603451 TMEM60Q9H2L4 133 aa10.65□□□□□ -0.7
SQSTM1P1-201ENST00000603451 TUFT1Q9NNX1 390 aa10.65□□□□□ -0.7
SQSTM1P1-201ENST00000603451 CFAP45Q9UL16 551 aa10.65□□□□□ -0.7
SQSTM1P1-201ENST00000603451 NR2E3Q9Y5X4 410 aa10.65□□□□□ -0.7
SQSTM1P1-201ENST00000603451 GRIN2DO15399 1336 aa10.64□□□□□ -0.71
SQSTM1P1-201ENST00000603451 POTEB3A0JP26 581 aa10.64□□□□□ -0.71
SQSTM1P1-201ENST00000603451 C17orf102A2RUQ5 167 aa10.64□□□□□ -0.71
SQSTM1P1-201ENST00000603451 MBLAC1A4D2B0 266 aaPredicted RBP10.64□□□□□ -0.71
SQSTM1P1-201ENST00000603451 CHMP2AO43633 222 aa10.64□□□□□ -0.71
SQSTM1P1-201ENST00000603451 EVI5O60447 810 aa10.64□□□□□ -0.71
SQSTM1P1-201ENST00000603451 PARNO95453 639 aaKnown RBP10.64□□□□□ -0.71
SQSTM1P1-201ENST00000603451 OATP04181 439 aa10.64□□□□□ -0.71
SQSTM1P1-201ENST00000603451 CLTBP09497 229 aa10.64□□□□□ -0.71
SQSTM1P1-201ENST00000603451 SMIM10L2AP0DMW4 78 aa10.64□□□□□ -0.71
SQSTM1P1-201ENST00000603451 SMIM10L2BP0DMW5 78 aa10.64□□□□□ -0.71
SQSTM1P1-201ENST00000603451 RPA1P27694 616 aa10.64□□□□□ -0.71
SQSTM1P1-201ENST00000603451 LONP1P36776 959 aaKnown RBP10.64□□□□□ -0.71
SQSTM1P1-201ENST00000603451 ADAM17P78536 824 aa10.64□□□□□ -0.71
SQSTM1P1-201ENST00000603451 MLLT1Q03111 559 aaPredicted RBP10.64□□□□□ -0.71
SQSTM1P1-201ENST00000603451 SF3A1Q15459 793 aaKnown RBP10.64□□□□□ -0.71
SQSTM1P1-201ENST00000603451 LRRC26Q2I0M4 334 aa10.64□□□□□ -0.71
SQSTM1P1-201ENST00000603451 TRIM60Q495X7 471 aa10.64□□□□□ -0.71
SQSTM1P1-201ENST00000603451 XKR3Q5GH77 459 aa10.64□□□□□ -0.71
SQSTM1P1-201ENST00000603451 ZNF484Q5JVG2 852 aa10.64□□□□□ -0.71
SQSTM1P1-201ENST00000603451 UTP14CQ5TAP6 766 aaKnown RBP10.64□□□□□ -0.71
SQSTM1P1-201ENST00000603451 NCAPH2Q6IBW4 605 aa10.64□□□□□ -0.71
SQSTM1P1-201ENST00000603451 SWSAP1Q6NVH7 229 aa10.64□□□□□ -0.71
SQSTM1P1-201ENST00000603451 TAF2Q6P1X5 1199 aa10.64□□□□□ -0.71
SQSTM1P1-201ENST00000603451 POTEBQ6S5H4 581 aa10.64□□□□□ -0.71
SQSTM1P1-201ENST00000603451 RPAINQ86UA6 219 aa10.64□□□□□ -0.71
SQSTM1P1-201ENST00000603451 TRIM50Q86XT4 487 aa10.64□□□□□ -0.71
SQSTM1P1-201ENST00000603451 C4orf19Q8IY42 314 aa10.64□□□□□ -0.71
SQSTM1P1-201ENST00000603451 CAGE1Q8TC20 777 aa10.64□□□□□ -0.71
SQSTM1P1-201ENST00000603451 KCNG4Q8TDN1 519 aa10.64□□□□□ -0.71
SQSTM1P1-201ENST00000603451 HSD17B14Q9BPX1 270 aa10.64□□□□□ -0.71
SQSTM1P1-201ENST00000603451 POLR3CQ9BUI4 534 aaPredicted RBP10.64□□□□□ -0.71
SQSTM1P1-201ENST00000603451 ZSWIM4Q9H7M6 989 aa10.64□□□□□ -0.71
SQSTM1P1-201ENST00000603451 NRBP2Q9NSY0 501 aa10.64□□□□□ -0.71
SQSTM1P1-201ENST00000603451 GABBR1Q9UBS5 961 aa10.64□□□□□ -0.71
SQSTM1P1-201ENST00000603451 LRWD1Q9UFC0 647 aa10.64□□□□□ -0.71
SQSTM1P1-201ENST00000603451 PDE4DIPQ5VU43 2346 aa10.63□□□□□ -0.71
SQSTM1P1-201ENST00000603451 POTEMA6NI47 508 aa10.63□□□□□ -0.71
SQSTM1P1-201ENST00000603451 GAS2O43903 313 aaKnown RBP10.63□□□□□ -0.71
SQSTM1P1-201ENST00000603451 SORBS3O60504 671 aa10.63□□□□□ -0.71
SQSTM1P1-201ENST00000603451 PPP6R2O75170 966 aa10.63□□□□□ -0.71
SQSTM1P1-201ENST00000603451 XRCC6P12956 609 aaKnown RBP eCLIP10.63□□□□□ -0.71
SQSTM1P1-201ENST00000603451 ATN1P54259 1190 aaPredicted RBP10.63□□□□□ -0.71
SQSTM1P1-201ENST00000603451 PSMC6P62333 389 aa10.63□□□□□ -0.71
SQSTM1P1-201ENST00000603451 PRKCEQ02156 737 aa10.63□□□□□ -0.71
SQSTM1P1-201ENST00000603451 PPFIA1Q13136 1202 aa10.63□□□□□ -0.71
SQSTM1P1-201ENST00000603451 PTK7Q13308 1070 aa10.63□□□□□ -0.71
SQSTM1P1-201ENST00000603451 NBR1Q14596 966 aa10.63□□□□□ -0.71
SQSTM1P1-201ENST00000603451 SLC39A14Q15043 492 aa10.63□□□□□ -0.71
SQSTM1P1-201ENST00000603451 PLCB4Q15147 1175 aa10.63□□□□□ -0.71
SQSTM1P1-201ENST00000603451 PTPAQ15257 358 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms