RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 WRAP73Q9P2S5 460 aaPredicted RBP19.64■□□□□ 0.74
SHKBP1-224ENST00000600718 MAPK8IP1Q9UQF2 711 aa19.64■□□□□ 0.74
SHKBP1-224ENST00000600718 PCDHA10Q9Y5I2 948 aa19.64■□□□□ 0.74
SHKBP1-224ENST00000600718 RRP9O43818 475 aaKnown RBP19.64■□□□□ 0.73
SHKBP1-224ENST00000600718 TGFB3P10600 412 aa19.64■□□□□ 0.73
SHKBP1-224ENST00000600718 COASYQ13057 564 aa19.64■□□□□ 0.73
SHKBP1-224ENST00000600718 GIT2Q14161 759 aa19.64■□□□□ 0.73
SHKBP1-224ENST00000600718 FAM110CQ1W6H9 321 aa19.64■□□□□ 0.73
SHKBP1-224ENST00000600718 SEPT14Q6ZU15 432 aa19.64■□□□□ 0.73
SHKBP1-224ENST00000600718 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.64■□□□□ 0.73
SHKBP1-224ENST00000600718 MORC4Q8TE76 937 aa19.64■□□□□ 0.73
SHKBP1-224ENST00000600718 CCDC102AQ96A19 550 aa19.64■□□□□ 0.73
SHKBP1-224ENST00000600718 MRFAP1L1Q96HT8 127 aa19.64■□□□□ 0.73
SHKBP1-224ENST00000600718 JPH1Q9HDC5 661 aaPredicted RBP19.64■□□□□ 0.73
SHKBP1-224ENST00000600718 SLC9A2Q9UBY0 812 aa19.64■□□□□ 0.73
SHKBP1-224ENST00000600718 FRMD3A2A2Y4 597 aa19.63■□□□□ 0.73
SHKBP1-224ENST00000600718 PSMC5P62195 406 aa19.63■□□□□ 0.73
SHKBP1-224ENST00000600718 RINT1Q6NUQ1 792 aa19.63■□□□□ 0.73
SHKBP1-224ENST00000600718 C4orf19Q8IY42 314 aa19.63■□□□□ 0.73
SHKBP1-224ENST00000600718 TRIM44Q96DX7 344 aaPredicted RBP19.63■□□□□ 0.73
SHKBP1-224ENST00000600718 SLC39A2Q9NP94 309 aa19.63■□□□□ 0.73
SHKBP1-224ENST00000600718 KCND2Q9NZV8 630 aa19.63■□□□□ 0.73
SHKBP1-224ENST00000600718 NPHP3-ACAD11A0A0J9YXS1 232 aa19.63■□□□□ 0.73
SHKBP1-224ENST00000600718 ASB14A6NK59 587 aa19.63■□□□□ 0.73
SHKBP1-224ENST00000600718 ESPNB1AK53 854 aa19.63■□□□□ 0.73
SHKBP1-224ENST00000600718 ZNF18P17022 549 aa19.63■□□□□ 0.73
SHKBP1-224ENST00000600718 CDC25BP30305 580 aa19.63■□□□□ 0.73
SHKBP1-224ENST00000600718 FANCCQ00597 558 aa19.63■□□□□ 0.73
SHKBP1-224ENST00000600718 TPD52L1Q16890 204 aaPredicted RBP19.63■□□□□ 0.73
SHKBP1-224ENST00000600718 KCNV1Q6PIU1 500 aa19.63■□□□□ 0.73
SHKBP1-224ENST00000600718 KIAA0895Q8NCT3 520 aa19.63■□□□□ 0.73
SHKBP1-224ENST00000600718 DBR1Q9UK59 544 aaKnown RBP19.63■□□□□ 0.73
SHKBP1-224ENST00000600718 IVNS1ABPQ9Y6Y0 642 aa19.63■□□□□ 0.73
SHKBP1-224ENST00000600718 ZBTB39O15060 712 aa19.62■□□□□ 0.73
SHKBP1-224ENST00000600718 DKC1O60832 514 aaKnown RBP eCLIP19.62■□□□□ 0.73
SHKBP1-224ENST00000600718 PSAPP07602 524 aa19.62■□□□□ 0.73
SHKBP1-224ENST00000600718 CDK11BP21127 795 aaKnown RBP19.62■□□□□ 0.73
SHKBP1-224ENST00000600718 SP2Q02086 613 aa19.62■□□□□ 0.73
SHKBP1-224ENST00000600718 C1orf186Q6ZWK4 172 aa19.62■□□□□ 0.73
SHKBP1-224ENST00000600718 ARHGEF35A5YM69 484 aa19.61■□□□□ 0.73
SHKBP1-224ENST00000600718 IGF2BP3O00425 579 aaKnown RBP eCLIP19.61■□□□□ 0.73
SHKBP1-224ENST00000600718 ATP1A3P13637 1013 aa19.61■□□□□ 0.73
SHKBP1-224ENST00000600718 MAPK4P31152 587 aa19.61■□□□□ 0.73
SHKBP1-224ENST00000600718 ZNF792Q3KQV3 632 aa19.61■□□□□ 0.73
SHKBP1-224ENST00000600718 HERC4Q5GLZ8 1057 aaPredicted RBP19.61■□□□□ 0.73
SHKBP1-224ENST00000600718 FAM26FQ5R3K3 315 aa19.61■□□□□ 0.73
SHKBP1-224ENST00000600718 GUF1Q8N442 669 aaKnown RBP19.61■□□□□ 0.73
SHKBP1-224ENST00000600718 HPS3Q969F9 1004 aa19.61■□□□□ 0.73
SHKBP1-224ENST00000600718 REEP2Q9BRK0 252 aa19.61■□□□□ 0.73
SHKBP1-224ENST00000600718 RUSC1Q9BVN2 902 aa19.61■□□□□ 0.73
SHKBP1-224ENST00000600718 BICDL2A1A5D9 508 aa19.61■□□□□ 0.73
SHKBP1-224ENST00000600718 CCNE1P24864 410 aa19.61■□□□□ 0.73
SHKBP1-224ENST00000600718 NEDD9Q14511 834 aa19.61■□□□□ 0.73
SHKBP1-224ENST00000600718 HHIPL1Q96JK4 782 aa19.61■□□□□ 0.73
SHKBP1-224ENST00000600718 SAMSN1Q9NSI8 373 aaKnown RBP19.61■□□□□ 0.73
SHKBP1-224ENST00000600718 CBFA2T2O43439 604 aa19.6■□□□□ 0.73
SHKBP1-224ENST00000600718 SERPINC1P01008 464 aa19.6■□□□□ 0.73
SHKBP1-224ENST00000600718 ADORA2AP29274 412 aa19.6■□□□□ 0.73
SHKBP1-224ENST00000600718 ACTR2P61160 394 aa19.6■□□□□ 0.73
SHKBP1-224ENST00000600718 RAD51AP2Q09MP3 1159 aa19.6■□□□□ 0.73
SHKBP1-224ENST00000600718 HS1BP3Q53T59 392 aa19.6■□□□□ 0.73
SHKBP1-224ENST00000600718 MIS18BP1Q6P0N0 1132 aa19.6■□□□□ 0.73
SHKBP1-224ENST00000600718 GPR142Q7Z601 462 aa19.6■□□□□ 0.73
SHKBP1-224ENST00000600718 IFNL1Q8IU54 200 aa19.6■□□□□ 0.73
SHKBP1-224ENST00000600718 P2RX5Q93086 422 aa19.6■□□□□ 0.73
SHKBP1-224ENST00000600718 BCAS3Q9H6U6 928 aa19.6■□□□□ 0.73
SHKBP1-224ENST00000600718 ANKEF1Q9NU02 776 aa19.6■□□□□ 0.73
SHKBP1-224ENST00000600718 IFNKQ9P0W0 207 aa19.6■□□□□ 0.73
SHKBP1-224ENST00000600718 ABT1Q9ULW3 272 aaKnown RBP19.6■□□□□ 0.73
SHKBP1-224ENST00000600718 PCDHA2Q9Y5H9 948 aa19.6■□□□□ 0.73
SHKBP1-224ENST00000600718 COL4A3BPQ9Y5P4 624 aa19.6■□□□□ 0.73
SHKBP1-224ENST00000600718 TMEM88BA6NKF7 163 aa19.59■□□□□ 0.73
SHKBP1-224ENST00000600718 FAM155AB1AL88 458 aaPredicted RBP19.59■□□□□ 0.73
SHKBP1-224ENST00000600718 TBCAO75347 108 aaKnown RBP19.59■□□□□ 0.73
SHKBP1-224ENST00000600718 PTMAP06454 111 aaKnown RBP19.59■□□□□ 0.73
SHKBP1-224ENST00000600718 GAP43P17677 238 aa19.59■□□□□ 0.73
SHKBP1-224ENST00000600718 CACNB1Q02641 598 aaPredicted RBP19.59■□□□□ 0.73
SHKBP1-224ENST00000600718 TAF1CQ15572 869 aaPredicted RBP19.59■□□□□ 0.73
SHKBP1-224ENST00000600718 CDKAL1Q5VV42 579 aa19.59■□□□□ 0.73
SHKBP1-224ENST00000600718 ABHD15Q6UXT9 468 aa19.59■□□□□ 0.73
SHKBP1-224ENST00000600718 CYFIP1Q7L576 1253 aa19.59■□□□□ 0.73
SHKBP1-224ENST00000600718 PLEKHH3Q7Z736 793 aa19.59■□□□□ 0.73
SHKBP1-224ENST00000600718 ATP6V0A1Q93050 837 aa19.59■□□□□ 0.73
SHKBP1-224ENST00000600718 ZHX3Q9H4I2 956 aa19.59■□□□□ 0.73
SHKBP1-224ENST00000600718 ADGRA2Q96PE1 1338 aa19.59■□□□□ 0.73
SHKBP1-224ENST00000600718 COBLO75128 1261 aa19.59■□□□□ 0.73
SHKBP1-224ENST00000600718 KIF20AO95235 890 aa19.59■□□□□ 0.73
SHKBP1-224ENST00000600718 ATG7O95352 703 aa19.59■□□□□ 0.73
SHKBP1-224ENST00000600718 GUCY2CP25092 1073 aa19.59■□□□□ 0.73
SHKBP1-224ENST00000600718 YWHABP31946 246 aaKnown RBP19.59■□□□□ 0.73
SHKBP1-224ENST00000600718 UBASH3AP57075 661 aa19.59■□□□□ 0.73
SHKBP1-224ENST00000600718 SREBF2Q12772 1141 aa19.59■□□□□ 0.73
SHKBP1-224ENST00000600718 UGCGQ16739 394 aa19.59■□□□□ 0.73
SHKBP1-224ENST00000600718 TTI2Q6NXR4 508 aa19.59■□□□□ 0.73
SHKBP1-224ENST00000600718 ZNF467Q7Z7K2 595 aaPredicted RBP19.59■□□□□ 0.73
SHKBP1-224ENST00000600718 DRC7Q8IY82 874 aa19.59■□□□□ 0.73
SHKBP1-224ENST00000600718 NOC3LQ8WTT2 800 aaKnown RBP19.59■□□□□ 0.73
SHKBP1-224ENST00000600718 XPO4Q9C0E2 1151 aaKnown RBP19.59■□□□□ 0.73
SHKBP1-224ENST00000600718 ODF2LQ9ULJ1 636 aa19.59■□□□□ 0.73
SHKBP1-224ENST00000600718 GOLGA6L6A8MZA4 724 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms