RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 TRAF1Q13077 416 aa15.69■□□□□ 0.1
IRF3-225ENST00000600022 COL19A1Q14993 1142 aa15.69■□□□□ 0.1
IRF3-225ENST00000600022 CLUL1Q15846 466 aa15.69■□□□□ 0.1
IRF3-225ENST00000600022 LINC01599Q8WXQ3 324 aa15.69■□□□□ 0.1
IRF3-225ENST00000600022 PABPC5Q96DU9 382 aaKnown RBP15.69■□□□□ 0.1
IRF3-225ENST00000600022 PCYT2Q99447 389 aa15.69■□□□□ 0.1
IRF3-225ENST00000600022 LRRC2Q9BYS8 371 aa15.69■□□□□ 0.1
IRF3-225ENST00000600022 NRCAMQ92823 1304 aa15.68■□□□□ 0.1
IRF3-225ENST00000600022 MUC6Q6W4X9 2439 aa15.68■□□□□ 0.1
IRF3-225ENST00000600022 LINC01565O15544 149 aa15.68■□□□□ 0.1
IRF3-225ENST00000600022 PRC1O43663 620 aa15.68■□□□□ 0.1
IRF3-225ENST00000600022 CTNNB1P35222 781 aa15.68■□□□□ 0.1
IRF3-225ENST00000600022 BMPR1AP36894 532 aa15.68■□□□□ 0.1
IRF3-225ENST00000600022 IGBP1P78318 339 aa15.68■□□□□ 0.1
IRF3-225ENST00000600022 PPFIA1Q13136 1202 aa15.68■□□□□ 0.1
IRF3-225ENST00000600022 CAMK1Q14012 370 aa15.68■□□□□ 0.1
IRF3-225ENST00000600022 SART3Q15020 963 aaKnown RBP15.68■□□□□ 0.1
IRF3-225ENST00000600022 GRIK4Q16099 956 aa15.68■□□□□ 0.1
IRF3-225ENST00000600022 PTPROQ16827 1216 aa15.68■□□□□ 0.1
IRF3-225ENST00000600022 ADCK5Q3MIX3 580 aa15.68■□□□□ 0.1
IRF3-225ENST00000600022 FIBCD1Q8N539 461 aa15.68■□□□□ 0.1
IRF3-225ENST00000600022 CYP2W1Q8TAV3 490 aa15.68■□□□□ 0.1
IRF3-225ENST00000600022 TRAPPC12Q8WVT3 735 aa15.68■□□□□ 0.1
IRF3-225ENST00000600022 JAKMIP1Q96N16 626 aaKnown RBP15.68■□□□□ 0.1
IRF3-225ENST00000600022 SAMD11Q96NU1 681 aa15.68■□□□□ 0.1
IRF3-225ENST00000600022 NSUN3Q9H649 340 aaKnown RBP15.68■□□□□ 0.1
IRF3-225ENST00000600022 PSTPIP2Q9H939 334 aa15.68■□□□□ 0.1
IRF3-225ENST00000600022 RC3H2Q9HBD1 1191 aaKnown RBP15.68■□□□□ 0.1
IRF3-225ENST00000600022 CLDND1Q9NY35 253 aa15.68■□□□□ 0.1
IRF3-225ENST00000600022 ZNF215Q9UL58 517 aaPredicted RBP15.68■□□□□ 0.1
IRF3-225ENST00000600022 HCN4Q9Y3Q4 1203 aa15.68■□□□□ 0.1
IRF3-225ENST00000600022 UBIAD1Q9Y5Z9 338 aa15.68■□□□□ 0.1
IRF3-225ENST00000600022 SH2B2O14492 632 aaPredicted RBP15.67■□□□□ 0.1
IRF3-225ENST00000600022 DNAJB1P25685 340 aa15.67■□□□□ 0.1
IRF3-225ENST00000600022 NEK4P51957 841 aa15.67■□□□□ 0.1
IRF3-225ENST00000600022 TMEM62Q0P6H9 643 aa15.67■□□□□ 0.1
IRF3-225ENST00000600022 HYAL1Q12794 435 aa15.67■□□□□ 0.1
IRF3-225ENST00000600022 FBXO47Q5MNV8 452 aa15.67■□□□□ 0.1
IRF3-225ENST00000600022 RPAINQ86UA6 219 aa15.67■□□□□ 0.1
IRF3-225ENST00000600022 NLRX1Q86UT6 975 aa15.67■□□□□ 0.1
IRF3-225ENST00000600022 CTCFLQ8NI51 663 aaPredicted RBP15.67■□□□□ 0.1
IRF3-225ENST00000600022 SEPT1Q8WYJ6 367 aa15.67■□□□□ 0.1
IRF3-225ENST00000600022 APBB2Q92870 758 aa15.67■□□□□ 0.1
IRF3-225ENST00000600022 CUL5Q93034 780 aa15.67■□□□□ 0.1
IRF3-225ENST00000600022 ZNF689Q96CS4 500 aaPredicted RBP15.67■□□□□ 0.1
IRF3-225ENST00000600022 ZSWIM6Q9HCJ5 1215 aa15.67■□□□□ 0.1
IRF3-225ENST00000600022 ALG13Q9NP73 1137 aaKnown RBP15.67■□□□□ 0.1
IRF3-225ENST00000600022 CDY2AQ9Y6F7 541 aa15.67■□□□□ 0.1
IRF3-225ENST00000600022 COL4A6Q14031 1691 aa15.67■□□□□ 0.1
IRF3-225ENST00000600022 MBLAC1A4D2B0 266 aaPredicted RBP15.66■□□□□ 0.1
IRF3-225ENST00000600022 K7ELQ4 463 aaPredicted RBP15.66■□□□□ 0.1
IRF3-225ENST00000600022 DDAH1O94760 285 aa15.66■□□□□ 0.1
IRF3-225ENST00000600022 INSRRP14616 1297 aa15.66■□□□□ 0.1
IRF3-225ENST00000600022 CD52P31358 61 aa15.66■□□□□ 0.1
IRF3-225ENST00000600022 GATMP50440 423 aa15.66■□□□□ 0.1
IRF3-225ENST00000600022 ZP2Q05996 745 aa15.66■□□□□ 0.1
IRF3-225ENST00000600022 CTC1Q2NKJ3 1217 aa15.66■□□□□ 0.1
IRF3-225ENST00000600022 TIGD5Q53EQ6 642 aa15.66■□□□□ 0.1
IRF3-225ENST00000600022 XRRA1Q6P2D8 792 aa15.66■□□□□ 0.1
IRF3-225ENST00000600022 CRIPAKQ8N1N5 446 aa15.66■□□□□ 0.1
IRF3-225ENST00000600022 GLG1Q92896 1179 aa15.66■□□□□ 0.1
IRF3-225ENST00000600022 GPRASP2Q96D09 838 aa15.66■□□□□ 0.1
IRF3-225ENST00000600022 PGBD1Q96JS3 809 aa15.66■□□□□ 0.1
IRF3-225ENST00000600022 UIMC1Q96RL1 719 aa15.66■□□□□ 0.1
IRF3-225ENST00000600022 MAP3K14Q99558 947 aa15.66■□□□□ 0.1
IRF3-225ENST00000600022 UPF3BQ9BZI7 483 aaKnown RBP15.66■□□□□ 0.1
IRF3-225ENST00000600022 FAM49AQ9H0Q0 323 aaPredicted RBP15.66■□□□□ 0.1
IRF3-225ENST00000600022 IGFLR1Q9H665 355 aa15.66■□□□□ 0.1
IRF3-225ENST00000600022 TUBE1Q9UJT0 475 aa15.66■□□□□ 0.1
IRF3-225ENST00000600022 PCDHA6Q9UN73 950 aa15.66■□□□□ 0.1
IRF3-225ENST00000600022 PCDHA8Q9Y5H6 950 aa15.66■□□□□ 0.1
IRF3-225ENST00000600022 ATG2AQ2TAZ0 1938 aa15.66■□□□□ 0.1
IRF3-225ENST00000600022 NLRC5Q86WI3 1866 aa15.65■□□□□ 0.1
IRF3-225ENST00000600022 C5orf67F2Z3F1 127 aa15.65■□□□□ 0.1
IRF3-225ENST00000600022 DGKIO75912 1065 aa15.65■□□□□ 0.1
IRF3-225ENST00000600022 HMGB1P09429 215 aaKnown RBP15.65■□□□□ 0.1
IRF3-225ENST00000600022 SMARCA1P28370 1054 aa15.65■□□□□ 0.1
IRF3-225ENST00000600022 TYW1BQ6NUM6 668 aa15.65■□□□□ 0.1
IRF3-225ENST00000600022 NFXL1Q6ZNB6 911 aa15.65■□□□□ 0.1
IRF3-225ENST00000600022 CLP1Q92989 425 aaKnown RBP15.65■□□□□ 0.1
IRF3-225ENST00000600022 NEK1Q96PY6 1258 aa15.65■□□□□ 0.1
IRF3-225ENST00000600022 JADE2Q9NQC1 790 aa15.65■□□□□ 0.1
IRF3-225ENST00000600022 ERAP1Q9NZ08 941 aa15.65■□□□□ 0.1
IRF3-225ENST00000600022 SEC63Q9UGP8 760 aaKnown RBP15.65■□□□□ 0.1
IRF3-225ENST00000600022 CYP46A1Q9Y6A2 500 aa15.65■□□□□ 0.1
IRF3-225ENST00000600022 ADGRA3Q8IWK6 1321 aa15.65■□□□□ 0.1
IRF3-225ENST00000600022 C19orf67A6NJJ6 358 aa15.64■□□□□ 0.09
IRF3-225ENST00000600022 PRR33A8MZF0 331 aa15.64■□□□□ 0.09
IRF3-225ENST00000600022 CD2BP2O95400 341 aaKnown RBP15.64■□□□□ 0.09
IRF3-225ENST00000600022 ARP10275 920 aa15.64■□□□□ 0.09
IRF3-225ENST00000600022 KIF5BP33176 963 aa15.64■□□□□ 0.09
IRF3-225ENST00000600022 IRS1P35568 1242 aa15.64■□□□□ 0.09
IRF3-225ENST00000600022 MTMR1Q13613 665 aa15.64■□□□□ 0.09
IRF3-225ENST00000600022 BTG3Q14201 252 aaPredicted RBP15.64■□□□□ 0.09
IRF3-225ENST00000600022 TAF2Q6P1X5 1199 aa15.64■□□□□ 0.09
IRF3-225ENST00000600022 BLOC1S2Q6QNY1 142 aa15.64■□□□□ 0.09
IRF3-225ENST00000600022 RUFY3Q7L099 469 aa15.64■□□□□ 0.09
IRF3-225ENST00000600022 GIMAP8Q8ND71 665 aaPredicted RBP15.64■□□□□ 0.09
IRF3-225ENST00000600022 SMARCAD1Q9H4L7 1026 aa15.64■□□□□ 0.09
IRF3-225ENST00000600022 PLAGL2Q9UPG8 496 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms