RNA–Protein interactions for RNA: ENST00000599880.1

SIN3B-210, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-210ENST00000599880 CPLX2Q6PUV4 134 aaKnown RBP12.43□□□□□ -0.42
SIN3B-210ENST00000599880 PLPPR4Q7Z2D5 763 aa12.43□□□□□ -0.42
SIN3B-210ENST00000599880 UPF3BQ9BZI7 483 aaKnown RBP12.43□□□□□ -0.42
SIN3B-210ENST00000599880 PRDM12Q9H4Q4 367 aa12.43□□□□□ -0.42
SIN3B-210ENST00000599880 AZI2Q9H6S1 392 aa12.43□□□□□ -0.42
SIN3B-210ENST00000599880 NCOA5Q9HCD5 579 aaKnown RBP12.43□□□□□ -0.42
SIN3B-210ENST00000599880 TUBE1Q9UJT0 475 aa12.43□□□□□ -0.42
SIN3B-210ENST00000599880 RALGAPA2Q2PPJ7 1873 aa12.42□□□□□ -0.42
SIN3B-210ENST00000599880 NLRC5Q86WI3 1866 aa12.42□□□□□ -0.42
SIN3B-210ENST00000599880 EVPLQ92817 2033 aa12.42□□□□□ -0.42
SIN3B-210ENST00000599880 IGKV6D-21A0A0A0MT36 114 aa12.42□□□□□ -0.42
SIN3B-210ENST00000599880 CPLX1O14810 134 aa12.42□□□□□ -0.42
SIN3B-210ENST00000599880 CA3P07451 260 aa12.42□□□□□ -0.42
SIN3B-210ENST00000599880 MYOGP15173 224 aa12.42□□□□□ -0.42
SIN3B-210ENST00000599880 CIITAP33076 1130 aa12.42□□□□□ -0.42
SIN3B-210ENST00000599880 GRIK4Q16099 956 aa12.42□□□□□ -0.42
SIN3B-210ENST00000599880 PLA2G4DQ86XP0 818 aa12.42□□□□□ -0.42
SIN3B-210ENST00000599880 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.42□□□□□ -0.42
SIN3B-210ENST00000599880 IL17RAQ96F46 866 aa12.42□□□□□ -0.42
SIN3B-210ENST00000599880 PCYT2Q99447 389 aa12.42□□□□□ -0.42
SIN3B-210ENST00000599880 C22orf23Q9BZE7 217 aa12.42□□□□□ -0.42
SIN3B-210ENST00000599880 PDRG1Q9NUG6 133 aa12.42□□□□□ -0.42
SIN3B-210ENST00000599880 CUL9Q8IWT3 2517 aa12.41□□□□□ -0.42
SIN3B-210ENST00000599880 RRN3P2A6NIE6 340 aa12.41□□□□□ -0.42
SIN3B-210ENST00000599880 IPO5O00410 1097 aaKnown RBP12.41□□□□□ -0.42
SIN3B-210ENST00000599880 DHX15O43143 795 aaKnown RBP12.41□□□□□ -0.42
SIN3B-210ENST00000599880 TLL1O43897 1013 aa12.41□□□□□ -0.42
SIN3B-210ENST00000599880 GJB5O95377 273 aa12.41□□□□□ -0.42
SIN3B-210ENST00000599880 MARK3P27448 753 aa12.41□□□□□ -0.42
SIN3B-210ENST00000599880 STAT5BP51692 787 aa12.41□□□□□ -0.42
SIN3B-210ENST00000599880 DEFB103AP81534 67 aa12.41□□□□□ -0.42
SIN3B-210ENST00000599880 SSRP1Q08945 709 aaKnown RBP12.41□□□□□ -0.42
SIN3B-210ENST00000599880 TCTN1Q2MV58 587 aa12.41□□□□□ -0.42
SIN3B-210ENST00000599880 MARCH8Q5T0T0 291 aa12.41□□□□□ -0.42
SIN3B-210ENST00000599880 RSPH3Q86UC2 560 aa12.41□□□□□ -0.42
SIN3B-210ENST00000599880 DBF4BQ8NFT6 615 aa12.41□□□□□ -0.42
SIN3B-210ENST00000599880 APBB2Q92870 758 aa12.41□□□□□ -0.42
SIN3B-210ENST00000599880 TBC1D22BQ9NU19 505 aa12.41□□□□□ -0.42
SIN3B-210ENST00000599880 VPS54Q9P1Q0 977 aa12.41□□□□□ -0.42
SIN3B-210ENST00000599880 ADAMTS3O15072 1205 aa12.4□□□□□ -0.42
SIN3B-210ENST00000599880 CDKL5O76039 1030 aa12.4□□□□□ -0.42
SIN3B-210ENST00000599880 CTSHP09668 335 aa12.4□□□□□ -0.42
SIN3B-210ENST00000599880 INSRRP14616 1297 aa12.4□□□□□ -0.42
SIN3B-210ENST00000599880 USP11P51784 963 aa12.4□□□□□ -0.42
SIN3B-210ENST00000599880 TAP1Q03518 808 aa12.4□□□□□ -0.42
SIN3B-210ENST00000599880 ADGRE1Q14246 886 aa12.4□□□□□ -0.42
SIN3B-210ENST00000599880 PLCB4Q15147 1175 aa12.4□□□□□ -0.42
SIN3B-210ENST00000599880 FAM160B1Q5W0V3 765 aa12.4□□□□□ -0.42
SIN3B-210ENST00000599880 GALNT17Q6IS24 598 aa12.4□□□□□ -0.42
SIN3B-210ENST00000599880 ABHD15Q6UXT9 468 aa12.4□□□□□ -0.42
SIN3B-210ENST00000599880 SMAP1Q8IYB5 467 aaPredicted RBP12.4□□□□□ -0.42
SIN3B-210ENST00000599880 DAGLBQ8NCG7 672 aa12.4□□□□□ -0.42
SIN3B-210ENST00000599880 SEPT8Q92599 483 aa12.4□□□□□ -0.42
SIN3B-210ENST00000599880 ZNF577Q9BSK1 485 aa12.4□□□□□ -0.42
SIN3B-210ENST00000599880 PCDHA4Q9UN74 947 aa12.4□□□□□ -0.42
SIN3B-210ENST00000599880 TRPC6Q9Y210 931 aa12.4□□□□□ -0.42
SIN3B-210ENST00000599880 VCANP13611 3396 aa12.4□□□□□ -0.42
SIN3B-210ENST00000599880 STK36Q9NRP7 1315 aa12.39□□□□□ -0.43
SIN3B-210ENST00000599880 TTC3P53804 2025 aa12.39□□□□□ -0.43
SIN3B-210ENST00000599880 CCNE2O96020 404 aa12.39□□□□□ -0.43
SIN3B-210ENST00000599880 AMHP03971 560 aa12.39□□□□□ -0.43
SIN3B-210ENST00000599880 POU3F3P20264 500 aaPredicted RBP12.39□□□□□ -0.43
SIN3B-210ENST00000599880 NLRP5P59047 1200 aa12.39□□□□□ -0.43
SIN3B-210ENST00000599880 KRT76Q01546 638 aa12.39□□□□□ -0.43
SIN3B-210ENST00000599880 MGAT3Q09327 533 aa12.39□□□□□ -0.43
SIN3B-210ENST00000599880 ANKRD1Q15327 319 aa12.39□□□□□ -0.43
SIN3B-210ENST00000599880 ZNF746Q6NUN9 644 aaPredicted RBP12.39□□□□□ -0.43
SIN3B-210ENST00000599880 MIS18BP1Q6P0N0 1132 aa12.39□□□□□ -0.43
SIN3B-210ENST00000599880 RUFY4Q6ZNE9 571 aa12.39□□□□□ -0.43
SIN3B-210ENST00000599880 RASGRP4Q8TDF6 673 aa12.39□□□□□ -0.43
SIN3B-210ENST00000599880 LENG9Q96B70 501 aa12.39□□□□□ -0.43
SIN3B-210ENST00000599880 RAD9AQ99638 391 aa12.39□□□□□ -0.43
SIN3B-210ENST00000599880 ZBED2Q9BTP6 218 aa12.39□□□□□ -0.43
SIN3B-210ENST00000599880 IFIH1Q9BYX4 1025 aaKnown RBP12.39□□□□□ -0.43
SIN3B-210ENST00000599880 TCEAL9Q9UHQ7 104 aa12.39□□□□□ -0.43
SIN3B-210ENST00000599880 SQORQ9Y6N5 450 aa12.39□□□□□ -0.43
SIN3B-210ENST00000599880 COL1A2P08123 1366 aa12.39□□□□□ -0.43
SIN3B-210ENST00000599880 REV3LO60673 3130 aa12.39□□□□□ -0.43
SIN3B-210ENST00000599880 PRRC2BQ5JSZ5 2229 aaKnown RBP12.38□□□□□ -0.43
SIN3B-210ENST00000599880 POTEB3A0JP26 581 aa12.38□□□□□ -0.43
SIN3B-210ENST00000599880 M0R2N6 131 aa12.38□□□□□ -0.43
SIN3B-210ENST00000599880 DDX39AO00148 427 aaKnown RBP12.38□□□□□ -0.43
SIN3B-210ENST00000599880 HBP1O60381 514 aa12.38□□□□□ -0.43
SIN3B-210ENST00000599880 PFKFB2O60825 505 aa12.38□□□□□ -0.43
SIN3B-210ENST00000599880 PPFIA3O75145 1194 aa12.38□□□□□ -0.43
SIN3B-210ENST00000599880 CHRNA1P02708 482 aa12.38□□□□□ -0.43
SIN3B-210ENST00000599880 SCRN1Q12765 414 aa12.38□□□□□ -0.43
SIN3B-210ENST00000599880 STK3Q13188 491 aa12.38□□□□□ -0.43
SIN3B-210ENST00000599880 PRR16Q569H4 304 aa12.38□□□□□ -0.43
SIN3B-210ENST00000599880 POTEBQ6S5H4 581 aa12.38□□□□□ -0.43
SIN3B-210ENST00000599880 MOXD1Q6UVY6 613 aa12.38□□□□□ -0.43
SIN3B-210ENST00000599880 CCDC60Q8IWA6 550 aaPredicted RBP12.38□□□□□ -0.43
SIN3B-210ENST00000599880 BLIDQ8IZY5 108 aa12.38□□□□□ -0.43
SIN3B-210ENST00000599880 ATP8B4Q8TF62 1192 aa12.38□□□□□ -0.43
SIN3B-210ENST00000599880 DNAJB3Q8WWF6 145 aa12.38□□□□□ -0.43
SIN3B-210ENST00000599880 SLKQ9H2G2 1235 aaPredicted RBP12.38□□□□□ -0.43
SIN3B-210ENST00000599880 ZNF302Q9NR11 478 aa12.38□□□□□ -0.43
SIN3B-210ENST00000599880 PCDHA2Q9Y5H9 948 aa12.38□□□□□ -0.43
SIN3B-210ENST00000599880 SMIM35A0A1B0GVV1 85 aa12.37□□□□□ -0.43
SIN3B-210ENST00000599880 LCHNA4D1U4 455 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms