RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 KCNJ6P48051 423 aa25.64■■□□□ 1.7
CCDC9-204ENST00000599398 IGBP1P78318 339 aa25.64■■□□□ 1.7
CCDC9-204ENST00000599398 ADAM17P78536 824 aa25.64■■□□□ 1.7
CCDC9-204ENST00000599398 CNKSR3Q6P9H4 555 aa25.64■■□□□ 1.7
CCDC9-204ENST00000599398 DAGLBQ8NCG7 672 aa25.64■■□□□ 1.7
CCDC9-204ENST00000599398 CDX2Q99626 313 aaPredicted RBP25.64■■□□□ 1.7
CCDC9-204ENST00000599398 ZNF576Q9H609 170 aa25.64■■□□□ 1.7
CCDC9-204ENST00000599398 TBC1D22BQ9NU19 505 aa25.64■■□□□ 1.7
CCDC9-204ENST00000599398 ORC3Q9UBD5 711 aaPredicted RBP25.64■■□□□ 1.7
CCDC9-204ENST00000599398 DHX15O43143 795 aaKnown RBP25.63■■□□□ 1.69
CCDC9-204ENST00000599398 ATG7O95352 703 aa25.63■■□□□ 1.69
CCDC9-204ENST00000599398 CTDNEP1O95476 244 aa25.63■■□□□ 1.69
CCDC9-204ENST00000599398 USP11P51784 963 aa25.63■■□□□ 1.69
CCDC9-204ENST00000599398 MBTPS1Q14703 1052 aa25.63■■□□□ 1.69
CCDC9-204ENST00000599398 PLPPR4Q7Z2D5 763 aa25.63■■□□□ 1.69
CCDC9-204ENST00000599398 TNPO1Q92973 898 aaKnown RBP25.63■■□□□ 1.69
CCDC9-204ENST00000599398 GTF3C6Q969F1 213 aa25.63■■□□□ 1.69
CCDC9-204ENST00000599398 SLC9A7Q96T83 725 aa25.63■■□□□ 1.69
CCDC9-204ENST00000599398 NKX2-4Q9H2Z4 354 aa25.63■■□□□ 1.69
CCDC9-204ENST00000599398 TUBE1Q9UJT0 475 aa25.63■■□□□ 1.69
CCDC9-204ENST00000599398 CDH23Q9H251 3354 aa25.62■■□□□ 1.69
CCDC9-204ENST00000599398 CAND2O75155 1236 aa25.62■■□□□ 1.69
CCDC9-204ENST00000599398 INSRRP14616 1297 aa25.62■■□□□ 1.69
CCDC9-204ENST00000599398 PLCB4Q15147 1175 aa25.62■■□□□ 1.69
CCDC9-204ENST00000599398 FAM160B1Q5W0V3 765 aa25.62■■□□□ 1.69
CCDC9-204ENST00000599398 MIS18BP1Q6P0N0 1132 aa25.62■■□□□ 1.69
CCDC9-204ENST00000599398 ABHD15Q6UXT9 468 aa25.62■■□□□ 1.69
CCDC9-204ENST00000599398 WASF1Q92558 559 aa25.62■■□□□ 1.69
CCDC9-204ENST00000599398 YBX2Q9Y2T7 364 aaKnown RBP25.62■■□□□ 1.69
CCDC9-204ENST00000599398 RBAK-RBAKDNI3L0D1 243 aa25.61■■□□□ 1.69
CCDC9-204ENST00000599398 NPY5RQ15761 445 aa25.61■■□□□ 1.69
CCDC9-204ENST00000599398 TAF2Q6P1X5 1199 aa25.61■■□□□ 1.69
CCDC9-204ENST00000599398 RUFY4Q6ZNE9 571 aa25.61■■□□□ 1.69
CCDC9-204ENST00000599398 MYLIPQ8WY64 445 aa25.61■■□□□ 1.69
CCDC9-204ENST00000599398 LENG9Q96B70 501 aa25.61■■□□□ 1.69
CCDC9-204ENST00000599398 PHF20Q9BVI0 1012 aa25.61■■□□□ 1.69
CCDC9-204ENST00000599398 SLC28A3Q9HAS3 691 aa25.61■■□□□ 1.69
CCDC9-204ENST00000599398 MYH9P35579 1960 aaKnown RBP25.61■■□□□ 1.69
CCDC9-204ENST00000599398 POTEB3A0JP26 581 aa25.6■■□□□ 1.69
CCDC9-204ENST00000599398 RRN3P2A6NIE6 340 aa25.6■■□□□ 1.69
CCDC9-204ENST00000599398 M0R2N6 131 aa25.6■■□□□ 1.69
CCDC9-204ENST00000599398 EDIL3O43854 480 aa25.6■■□□□ 1.69
CCDC9-204ENST00000599398 MYOGP15173 224 aa25.6■■□□□ 1.69
CCDC9-204ENST00000599398 IKBKEQ14164 716 aa25.6■■□□□ 1.69
CCDC9-204ENST00000599398 GRIN2CQ14957 1233 aa25.6■■□□□ 1.69
CCDC9-204ENST00000599398 NONOQ15233 471 aaKnown RBP eCLIP25.6■■□□□ 1.69
CCDC9-204ENST00000599398 ZNF746Q6NUN9 644 aaPredicted RBP25.6■■□□□ 1.69
CCDC9-204ENST00000599398 POTEBQ6S5H4 581 aa25.6■■□□□ 1.69
CCDC9-204ENST00000599398 KRT25Q7Z3Z0 450 aa25.6■■□□□ 1.69
CCDC9-204ENST00000599398 CCDC60Q8IWA6 550 aaPredicted RBP25.6■■□□□ 1.69
CCDC9-204ENST00000599398 PHOSPHO2Q8TCD6 241 aa25.6■■□□□ 1.69
CCDC9-204ENST00000599398 ZNF302Q9NR11 478 aa25.6■■□□□ 1.69
CCDC9-204ENST00000599398 GJB4Q9NTQ9 266 aa25.6■■□□□ 1.69
CCDC9-204ENST00000599398 SAMM50Q9Y512 469 aa25.6■■□□□ 1.69
CCDC9-204ENST00000599398 PCDHA11Q9Y5I1 949 aa25.6■■□□□ 1.69
CCDC9-204ENST00000599398 IGKV6D-21A0A0A0MT36 114 aa25.59■■□□□ 1.69
CCDC9-204ENST00000599398 CCDC194A0A1B0GVG4 234 aa25.59■■□□□ 1.69
CCDC9-204ENST00000599398 MSH4O15457 936 aa25.59■■□□□ 1.69
CCDC9-204ENST00000599398 SLC26A2P50443 739 aa25.59■■□□□ 1.69
CCDC9-204ENST00000599398 WDR5P61964 334 aaKnown RBP25.59■■□□□ 1.69
CCDC9-204ENST00000599398 KRT76Q01546 638 aa25.59■■□□□ 1.69
CCDC9-204ENST00000599398 TCTN1Q2MV58 587 aa25.59■■□□□ 1.69
CCDC9-204ENST00000599398 MARCH8Q5T0T0 291 aa25.59■■□□□ 1.69
CCDC9-204ENST00000599398 SWSAP1Q6NVH7 229 aa25.59■■□□□ 1.69
CCDC9-204ENST00000599398 PDXDC2PQ6P474 469 aa25.59■■□□□ 1.69
CCDC9-204ENST00000599398 RSPH3Q86UC2 560 aa25.59■■□□□ 1.69
CCDC9-204ENST00000599398 ABHD14A-ACY1A0A1B0GW23 586 aa25.58■■□□□ 1.69
CCDC9-204ENST00000599398 MBLAC1A4D2B0 266 aaPredicted RBP25.58■■□□□ 1.69
CCDC9-204ENST00000599398 TDP2O95551 362 aa25.58■■□□□ 1.69
CCDC9-204ENST00000599398 INF2Q27J81 1249 aa25.58■■□□□ 1.69
CCDC9-204ENST00000599398 HERC6Q8IVU3 1022 aa25.58■■□□□ 1.69
CCDC9-204ENST00000599398 CKAP2LQ8IYA6 745 aa25.58■■□□□ 1.69
CCDC9-204ENST00000599398 SMAP1Q8IYB5 467 aaPredicted RBP25.58■■□□□ 1.69
CCDC9-204ENST00000599398 DBF4BQ8NFT6 615 aa25.58■■□□□ 1.69
CCDC9-204ENST00000599398 TRAPPC12Q8WVT3 735 aa25.58■■□□□ 1.69
CCDC9-204ENST00000599398 DNAJB3Q8WWF6 145 aa25.58■■□□□ 1.69
CCDC9-204ENST00000599398 ZBTB10Q96DT7 871 aa25.58■■□□□ 1.69
CCDC9-204ENST00000599398 KIF28PB7ZC32 967 aa25.57■■□□□ 1.68
CCDC9-204ENST00000599398 GAS7O60861 476 aa25.57■■□□□ 1.68
CCDC9-204ENST00000599398 EFCAB14O75071 495 aa25.57■■□□□ 1.68
CCDC9-204ENST00000599398 PSAPP07602 524 aa25.57■■□□□ 1.68
CCDC9-204ENST00000599398 FDPSP14324 419 aaKnown RBP25.57■■□□□ 1.68
CCDC9-204ENST00000599398 PPP2R2DQ66LE6 453 aa25.57■■□□□ 1.68
CCDC9-204ENST00000599398 NSUN7Q8NE18 718 aaKnown RBP25.57■■□□□ 1.68
CCDC9-204ENST00000599398 FAM49AQ9H0Q0 323 aaPredicted RBP25.57■■□□□ 1.68
CCDC9-204ENST00000599398 PCDHA10Q9Y5I2 948 aa25.57■■□□□ 1.68
CCDC9-204ENST00000599398 PTPRSQ13332 1948 aa25.57■■□□□ 1.68
CCDC9-204ENST00000599398 FOSL2P15408 326 aa25.56■■□□□ 1.68
CCDC9-204ENST00000599398 DEFB103AP81534 67 aa25.56■■□□□ 1.68
CCDC9-204ENST00000599398 Q4G0T1 1027 aa25.56■■□□□ 1.68
CCDC9-204ENST00000599398 PLEKHG4Q58EX7 1191 aa25.56■■□□□ 1.68
CCDC9-204ENST00000599398 FAM26DQ5JW98 314 aa25.56■■□□□ 1.68
CCDC9-204ENST00000599398 LRCH2Q5VUJ6 765 aa25.56■■□□□ 1.68
CCDC9-204ENST00000599398 TRMT1LQ7Z2T5 733 aaKnown RBP25.56■■□□□ 1.68
CCDC9-204ENST00000599398 RPAINQ86UA6 219 aa25.56■■□□□ 1.68
CCDC9-204ENST00000599398 SEPT8Q92599 483 aa25.56■■□□□ 1.68
CCDC9-204ENST00000599398 GJA10Q969M2 543 aa25.56■■□□□ 1.68
CCDC9-204ENST00000599398 RIT2Q99578 217 aa25.56■■□□□ 1.68
CCDC9-204ENST00000599398 ZBED2Q9BTP6 218 aa25.56■■□□□ 1.68
CCDC9-204ENST00000599398 TEKT3Q9BXF9 490 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms