RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 U2AF2P26368 475 aaKnown RBP eCLIP19.97■□□□□ 0.79
USHBP1-209ENST00000598570 TMEM240Q5SV17 173 aa19.97■□□□□ 0.79
USHBP1-209ENST00000598570 C9orf50Q5SZB4 431 aa19.97■□□□□ 0.79
USHBP1-209ENST00000598570 UTP14CQ5TAP6 766 aaKnown RBP19.97■□□□□ 0.79
USHBP1-209ENST00000598570 GPR153Q6NV75 609 aa19.97■□□□□ 0.79
USHBP1-209ENST00000598570 PIK3AP1Q6ZUJ8 805 aa19.97■□□□□ 0.79
USHBP1-209ENST00000598570 HAS1Q92839 578 aa19.97■□□□□ 0.79
USHBP1-209ENST00000598570 WNT8BQ93098 351 aa19.97■□□□□ 0.79
USHBP1-209ENST00000598570 BRMS1Q9HCU9 246 aa19.97■□□□□ 0.79
USHBP1-209ENST00000598570 PCDHA10Q9Y5I2 948 aa19.97■□□□□ 0.79
USHBP1-209ENST00000598570 TANC1Q9C0D5 1861 aa19.96■□□□□ 0.79
USHBP1-209ENST00000598570 MYH9P35579 1960 aaKnown RBP19.96■□□□□ 0.79
USHBP1-209ENST00000598570 FAM205CA6NFA0 338 aa19.96■□□□□ 0.79
USHBP1-209ENST00000598570 SLC37A4O43826 429 aa19.96■□□□□ 0.79
USHBP1-209ENST00000598570 CXCL10P02778 98 aa19.96■□□□□ 0.79
USHBP1-209ENST00000598570 PFKMP08237 780 aa19.96■□□□□ 0.79
USHBP1-209ENST00000598570 CKBP12277 381 aa19.96■□□□□ 0.79
USHBP1-209ENST00000598570 SP4Q02446 784 aa19.96■□□□□ 0.79
USHBP1-209ENST00000598570 TRIM29Q14134 588 aa19.96■□□□□ 0.79
USHBP1-209ENST00000598570 PLCB4Q15147 1175 aa19.96■□□□□ 0.79
USHBP1-209ENST00000598570 FAM26DQ5JW98 314 aa19.96■□□□□ 0.79
USHBP1-209ENST00000598570 LMBR1Q8WVP7 490 aa19.96■□□□□ 0.79
USHBP1-209ENST00000598570 C8orf76Q96K31 380 aa19.96■□□□□ 0.79
USHBP1-209ENST00000598570 PPP1R12CQ9BZL4 782 aa19.96■□□□□ 0.79
USHBP1-209ENST00000598570 SETD4Q9NVD3 440 aa19.96■□□□□ 0.79
USHBP1-209ENST00000598570 DDX25Q9UHL0 483 aaKnown RBP19.96■□□□□ 0.79
USHBP1-209ENST00000598570 RRN3P2A6NIE6 340 aa19.95■□□□□ 0.78
USHBP1-209ENST00000598570 ZBTB42B2RXF5 422 aa19.95■□□□□ 0.78
USHBP1-209ENST00000598570 TREHO43280 583 aa19.95■□□□□ 0.78
USHBP1-209ENST00000598570 SFNP31947 248 aa19.95■□□□□ 0.78
USHBP1-209ENST00000598570 PPP2R5CQ13362 524 aa19.95■□□□□ 0.78
USHBP1-209ENST00000598570 MIS18BP1Q6P0N0 1132 aa19.95■□□□□ 0.78
USHBP1-209ENST00000598570 CCDC60Q8IWA6 550 aaPredicted RBP19.95■□□□□ 0.78
USHBP1-209ENST00000598570 RPUSD2Q8IZ73 545 aaKnown RBP19.95■□□□□ 0.78
USHBP1-209ENST00000598570 CCDC155Q8N6L0 562 aa19.95■□□□□ 0.78
USHBP1-209ENST00000598570 TET1Q8NFU7 2136 aa19.95■□□□□ 0.78
USHBP1-209ENST00000598570 HERVK_113Q902F9 699 aa19.95■□□□□ 0.78
USHBP1-209ENST00000598570 GLG1Q92896 1179 aa19.95■□□□□ 0.78
USHBP1-209ENST00000598570 TNPO1Q92973 898 aaKnown RBP19.95■□□□□ 0.78
USHBP1-209ENST00000598570 ATP6V0A1Q93050 837 aa19.95■□□□□ 0.78
USHBP1-209ENST00000598570 AZI2Q9H6S1 392 aa19.95■□□□□ 0.78
USHBP1-209ENST00000598570 VAV3Q9UKW4 847 aa19.95■□□□□ 0.78
USHBP1-209ENST00000598570 SCN5AQ14524 2016 aa19.94■□□□□ 0.78
USHBP1-209ENST00000598570 WDR64B1ANS9 1081 aa19.94■□□□□ 0.78
USHBP1-209ENST00000598570 INSRRP14616 1297 aa19.94■□□□□ 0.78
USHBP1-209ENST00000598570 SELPP16109 830 aa19.94■□□□□ 0.78
USHBP1-209ENST00000598570 LETM2Q2VYF4 491 aa19.94■□□□□ 0.78
USHBP1-209ENST00000598570 LRCH2Q5VUJ6 765 aa19.94■□□□□ 0.78
USHBP1-209ENST00000598570 ATP8B4Q8TF62 1192 aa19.94■□□□□ 0.78
USHBP1-209ENST00000598570 MTMR9Q96QG7 549 aa19.94■□□□□ 0.78
USHBP1-209ENST00000598570 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.94■□□□□ 0.78
USHBP1-209ENST00000598570 IGSF9BQ9UPX0 1349 aa19.94■□□□□ 0.78
USHBP1-209ENST00000598570 GAS7O60861 476 aa19.93■□□□□ 0.78
USHBP1-209ENST00000598570 STBD1O95210 358 aa19.93■□□□□ 0.78
USHBP1-209ENST00000598570 PSAPP07602 524 aa19.93■□□□□ 0.78
USHBP1-209ENST00000598570 JAK3P52333 1124 aa19.93■□□□□ 0.78
USHBP1-209ENST00000598570 CCL23P55773 120 aa19.93■□□□□ 0.78
USHBP1-209ENST00000598570 SPIRE1Q08AE8 756 aa19.93■□□□□ 0.78
USHBP1-209ENST00000598570 ORC2Q13416 577 aaPredicted RBP19.93■□□□□ 0.78
USHBP1-209ENST00000598570 MBTPS1Q14703 1052 aa19.93■□□□□ 0.78
USHBP1-209ENST00000598570 GRIK4Q16099 956 aa19.93■□□□□ 0.78
USHBP1-209ENST00000598570 FAM160B1Q5W0V3 765 aa19.93■□□□□ 0.78
USHBP1-209ENST00000598570 SWSAP1Q6NVH7 229 aa19.93■□□□□ 0.78
USHBP1-209ENST00000598570 PSRC1Q6PGN9 363 aaPredicted RBP19.93■□□□□ 0.78
USHBP1-209ENST00000598570 RETREG2Q8NC44 543 aa19.93■□□□□ 0.78
USHBP1-209ENST00000598570 TEKT3Q9BXF9 490 aa19.93■□□□□ 0.78
USHBP1-209ENST00000598570 UNC45AQ9H3U1 944 aa19.93■□□□□ 0.78
USHBP1-209ENST00000598570 ZNF302Q9NR11 478 aa19.93■□□□□ 0.78
USHBP1-209ENST00000598570 DISC1Q9NRI5 854 aa19.93■□□□□ 0.78
USHBP1-209ENST00000598570 NOD1Q9Y239 953 aa19.93■□□□□ 0.78
USHBP1-209ENST00000598570 SZT2Q5T011 3432 aa19.92■□□□□ 0.78
USHBP1-209ENST00000598570 POTEB3A0JP26 581 aa19.92■□□□□ 0.78
USHBP1-209ENST00000598570 SOX1O00570 391 aaPredicted RBP19.92■□□□□ 0.78
USHBP1-209ENST00000598570 WNT7AO00755 349 aa19.92■□□□□ 0.78
USHBP1-209ENST00000598570 HBP1O60381 514 aa19.92■□□□□ 0.78
USHBP1-209ENST00000598570 RPLP2P05387 115 aaKnown RBP19.92■□□□□ 0.78
USHBP1-209ENST00000598570 TRAPPC10P48553 1259 aa19.92■□□□□ 0.78
USHBP1-209ENST00000598570 PPFIA1Q13136 1202 aa19.92■□□□□ 0.78
USHBP1-209ENST00000598570 MKRN4PQ13434 485 aaPredicted RBP19.92■□□□□ 0.78
USHBP1-209ENST00000598570 SAFBQ15424 915 aaKnown RBP eCLIP19.92■□□□□ 0.78
USHBP1-209ENST00000598570 TAF2Q6P1X5 1199 aa19.92■□□□□ 0.78
USHBP1-209ENST00000598570 POTEBQ6S5H4 581 aa19.92■□□□□ 0.78
USHBP1-209ENST00000598570 ZNF365Q70YC5 407 aa19.92■□□□□ 0.78
USHBP1-209ENST00000598570 LRRC8DQ7L1W4 858 aa19.92■□□□□ 0.78
USHBP1-209ENST00000598570 SNX21Q969T3 373 aa19.92■□□□□ 0.78
USHBP1-209ENST00000598570 SCLYQ96I15 445 aa19.92■□□□□ 0.78
USHBP1-209ENST00000598570 PCDHA2Q9Y5H9 948 aa19.92■□□□□ 0.78
USHBP1-209ENST00000598570 COL1A2P08123 1366 aa19.92■□□□□ 0.78
USHBP1-209ENST00000598570 DDX39AO00148 427 aaKnown RBP19.91■□□□□ 0.78
USHBP1-209ENST00000598570 ZNF862O60290 1169 aa19.91■□□□□ 0.78
USHBP1-209ENST00000598570 CCNT1O60563 726 aaKnown RBP19.91■□□□□ 0.78
USHBP1-209ENST00000598570 CHMP4BP1P59074 171 aa19.91■□□□□ 0.78
USHBP1-209ENST00000598570 ZNF484Q5JVG2 852 aa19.91■□□□□ 0.78
USHBP1-209ENST00000598570 ZNF618Q5T7W0 954 aa19.91■□□□□ 0.78
USHBP1-209ENST00000598570 NOSTRINQ8IVI9 506 aa19.91■□□□□ 0.78
USHBP1-209ENST00000598570 FAM184AQ8NB25 1140 aa19.91■□□□□ 0.78
USHBP1-209ENST00000598570 BBXQ8WY36 941 aaPredicted RBP19.91■□□□□ 0.78
USHBP1-209ENST00000598570 GJA10Q969M2 543 aa19.91■□□□□ 0.78
USHBP1-209ENST00000598570 KIF3AQ9Y496 699 aa19.91■□□□□ 0.78
USHBP1-209ENST00000598570 NBNO60934 754 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms