RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 JMJD4Q9H9V9 463 aa17.98■□□□□ 0.47
LIG1-214ENST00000597146 TSHZ2Q9NRE2 1034 aa17.98■□□□□ 0.47
LIG1-214ENST00000597146 NEDD4P46934 1319 aa17.98■□□□□ 0.47
LIG1-214ENST00000597146 TTC41PQ6P2S7 1318 aa17.98■□□□□ 0.47
LIG1-214ENST00000597146 TPRP12270 2363 aaKnown RBP17.97■□□□□ 0.47
LIG1-214ENST00000597146 CD52P31358 61 aa17.97■□□□□ 0.47
LIG1-214ENST00000597146 GHRHRQ02643 423 aa17.97■□□□□ 0.47
LIG1-214ENST00000597146 AAMPQ13685 434 aa17.97■□□□□ 0.47
LIG1-214ENST00000597146 STOX1Q6ZVD7 989 aa17.97■□□□□ 0.47
LIG1-214ENST00000597146 GPR20Q99678 358 aa17.97■□□□□ 0.47
LIG1-214ENST00000597146 USP26Q9BXU7 913 aa17.97■□□□□ 0.47
LIG1-214ENST00000597146 S1PR5Q9H228 398 aa17.97■□□□□ 0.47
LIG1-214ENST00000597146 PPP1R11O60927 126 aaPredicted RBP17.96■□□□□ 0.47
LIG1-214ENST00000597146 TGFB3P10600 412 aa17.96■□□□□ 0.47
LIG1-214ENST00000597146 IBSPP21815 317 aaPredicted RBP17.96■□□□□ 0.47
LIG1-214ENST00000597146 CCND2P30279 289 aa17.96■□□□□ 0.47
LIG1-214ENST00000597146 SP4Q02446 784 aa17.96■□□□□ 0.47
LIG1-214ENST00000597146 MTMR3Q13615 1198 aa17.96■□□□□ 0.47
LIG1-214ENST00000597146 MCTP2Q6DN12 878 aa17.96■□□□□ 0.47
LIG1-214ENST00000597146 SYCE2Q6PIF2 218 aa17.96■□□□□ 0.47
LIG1-214ENST00000597146 TSHZ1Q6ZSZ6 1077 aa17.96■□□□□ 0.47
LIG1-214ENST00000597146 CYFIP1Q7L576 1253 aa17.96■□□□□ 0.47
LIG1-214ENST00000597146 RTN4RL1Q86UN2 441 aaPredicted RBP17.96■□□□□ 0.47
LIG1-214ENST00000597146 NPAS4Q8IUM7 802 aa17.96■□□□□ 0.47
LIG1-214ENST00000597146 RMDN1Q96DB5 314 aa17.96■□□□□ 0.47
LIG1-214ENST00000597146 RWDD1Q9H446 243 aaPredicted RBP17.96■□□□□ 0.47
LIG1-214ENST00000597146 ZNF215Q9UL58 517 aaPredicted RBP17.96■□□□□ 0.47
LIG1-214ENST00000597146 SORCS3Q9UPU3 1222 aa17.96■□□□□ 0.47
LIG1-214ENST00000597146 CDY2AQ9Y6F7 541 aa17.96■□□□□ 0.47
LIG1-214ENST00000597146 ARP10275 920 aa17.95■□□□□ 0.46
LIG1-214ENST00000597146 TECP42680 631 aa17.95■□□□□ 0.46
LIG1-214ENST00000597146 SEMA3FQ13275 785 aa17.95■□□□□ 0.46
LIG1-214ENST00000597146 ASPRV1Q53RT3 343 aa17.95■□□□□ 0.46
LIG1-214ENST00000597146 ASTLQ6HA08 431 aaPredicted RBP17.95■□□□□ 0.46
LIG1-214ENST00000597146 ANKRD54Q6NXT1 300 aa17.95■□□□□ 0.46
LIG1-214ENST00000597146 METTL7BQ6UX53 244 aa17.95■□□□□ 0.46
LIG1-214ENST00000597146 MFSD6Q6ZSS7 791 aa17.95■□□□□ 0.46
LIG1-214ENST00000597146 HCSTQ9UBK5 93 aa17.95■□□□□ 0.46
LIG1-214ENST00000597146 BAZ2BQ9UIF8 2168 aaKnown RBP17.95■□□□□ 0.46
LIG1-214ENST00000597146 C2CD4DB7Z1M9 353 aa17.94■□□□□ 0.46
LIG1-214ENST00000597146 ERVFC1P60507 584 aa17.94■□□□□ 0.46
LIG1-214ENST00000597146 LLGL2Q6P1M3 1020 aa17.94■□□□□ 0.46
LIG1-214ENST00000597146 TAF2Q6P1X5 1199 aa17.94■□□□□ 0.46
LIG1-214ENST00000597146 UBALD2Q8IYN6 164 aa17.94■□□□□ 0.46
LIG1-214ENST00000597146 DNAJB3Q8WWF6 145 aa17.94■□□□□ 0.46
LIG1-214ENST00000597146 ZBTB10Q96DT7 871 aa17.94■□□□□ 0.46
LIG1-214ENST00000597146 AMNQ9BXJ7 453 aa17.94■□□□□ 0.46
LIG1-214ENST00000597146 KAT14Q9H8E8 782 aa17.94■□□□□ 0.46
LIG1-214ENST00000597146 NRCAMQ92823 1304 aa17.94■□□□□ 0.46
LIG1-214ENST00000597146 A0A0D9SFI3 127 aa17.93■□□□□ 0.46
LIG1-214ENST00000597146 KCNC3Q14003 757 aa17.93■□□□□ 0.46
LIG1-214ENST00000597146 PLPP4Q5VZY2 271 aa17.93■□□□□ 0.46
LIG1-214ENST00000597146 DGLUCYQ7Z3D6 616 aa17.93■□□□□ 0.46
LIG1-214ENST00000597146 FCHSD1Q86WN1 690 aa17.93■□□□□ 0.46
LIG1-214ENST00000597146 DGKHQ86XP1 1220 aa17.93■□□□□ 0.46
LIG1-214ENST00000597146 FAM227BQ96M60 508 aa17.93■□□□□ 0.46
LIG1-214ENST00000597146 CDCA3Q99618 268 aaPredicted RBP17.93■□□□□ 0.46
LIG1-214ENST00000597146 ACACBO00763 2458 aa17.93■□□□□ 0.46
LIG1-214ENST00000597146 ZFHX4Q86UP3 3567 aa17.92■□□□□ 0.46
LIG1-214ENST00000597146 ASGR2P07307 311 aa17.92■□□□□ 0.46
LIG1-214ENST00000597146 PARP1P09874 1014 aaKnown RBP17.92■□□□□ 0.46
LIG1-214ENST00000597146 SCG2P13521 617 aa17.92■□□□□ 0.46
LIG1-214ENST00000597146 MRPS9P82933 396 aaKnown RBP17.92■□□□□ 0.46
LIG1-214ENST00000597146 APOBRQ0VD83 1088 aa17.92■□□□□ 0.46
LIG1-214ENST00000597146 PPFIA1Q13136 1202 aa17.92■□□□□ 0.46
LIG1-214ENST00000597146 CWF19L1Q69YN2 538 aaKnown RBP17.92■□□□□ 0.46
LIG1-214ENST00000597146 RSPH3Q86UC2 560 aa17.92■□□□□ 0.46
LIG1-214ENST00000597146 ZNF589Q86UQ0 364 aaPredicted RBP17.92■□□□□ 0.46
LIG1-214ENST00000597146 ESR2Q92731 530 aa17.92■□□□□ 0.46
LIG1-214ENST00000597146 MFSD1Q9H3U5 465 aa17.92■□□□□ 0.46
LIG1-214ENST00000597146 TUBE1Q9UJT0 475 aa17.92■□□□□ 0.46
LIG1-214ENST00000597146 DENND4AQ7Z401 1863 aa17.92■□□□□ 0.46
LIG1-214ENST00000597146 ZMYM6O95789 1325 aa17.92■□□□□ 0.46
LIG1-214ENST00000597146 TRIM6-TRIM34B2RNG4 842 aa17.91■□□□□ 0.46
LIG1-214ENST00000597146 FSCN2O14926 492 aa17.91■□□□□ 0.46
LIG1-214ENST00000597146 FGF18O76093 207 aa17.91■□□□□ 0.46
LIG1-214ENST00000597146 STAG3L1P0CL83 205 aa17.91■□□□□ 0.46
LIG1-214ENST00000597146 SRGAP2BP0DMP2 458 aa17.91■□□□□ 0.46
LIG1-214ENST00000597146 MARK3P27448 753 aa17.91■□□□□ 0.46
LIG1-214ENST00000597146 MRPS6P82932 125 aaKnown RBP17.91■□□□□ 0.46
LIG1-214ENST00000597146 UBE3AQ05086 875 aa17.91■□□□□ 0.46
LIG1-214ENST00000597146 HDAC1Q13547 482 aaPredicted RBP17.91■□□□□ 0.46
LIG1-214ENST00000597146 NEDD9Q14511 834 aa17.91■□□□□ 0.46
LIG1-214ENST00000597146 GRIK4Q16099 956 aa17.91■□□□□ 0.46
LIG1-214ENST00000597146 GNPTABQ3T906 1256 aa17.91■□□□□ 0.46
LIG1-214ENST00000597146 SPOUT1Q5T280 376 aaKnown RBP17.91■□□□□ 0.46
LIG1-214ENST00000597146 TMEM184AQ6ZMB5 413 aa17.91■□□□□ 0.46
LIG1-214ENST00000597146 STAG2Q8N3U4 1231 aa17.91■□□□□ 0.46
LIG1-214ENST00000597146 INPP4AQ96PE3 977 aaPredicted RBP17.91■□□□□ 0.46
LIG1-214ENST00000597146 FAM49AQ9H0Q0 323 aaPredicted RBP17.91■□□□□ 0.46
LIG1-214ENST00000597146 POMKQ9H5K3 350 aa17.91■□□□□ 0.46
LIG1-214ENST00000597146 HELLSQ9NRZ9 838 aa17.91■□□□□ 0.46
LIG1-214ENST00000597146 RTEL1Q9NZ71 1219 aa17.91■□□□□ 0.46
LIG1-214ENST00000597146 NR2E1Q9Y466 385 aa17.91■□□□□ 0.46
LIG1-214ENST00000597146 PCDHA1Q9Y5I3 950 aa17.91■□□□□ 0.46
LIG1-214ENST00000597146 SPTBN2O15020 2390 aa17.9■□□□□ 0.46
LIG1-214ENST00000597146 FSD2A1L4K1 749 aa17.9■□□□□ 0.46
LIG1-214ENST00000597146 SPATA31C2B4DYI2 1134 aa17.9■□□□□ 0.46
LIG1-214ENST00000597146 MX1P20591 662 aa17.9■□□□□ 0.46
LIG1-214ENST00000597146 TMEM62Q0P6H9 643 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms