RNA–Protein interactions for RNA: ENST00000596788.1

IRF3-214, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-214ENST00000596788 IGSF9BQ9UPX0 1349 aa23.39■■□□□ 1.34
IRF3-214ENST00000596788 NOP56O00567 594 aaKnown RBP23.39■■□□□ 1.33
IRF3-214ENST00000596788 POLR2DO15514 142 aaKnown RBP23.39■■□□□ 1.33
IRF3-214ENST00000596788 PSAPP07602 524 aa23.39■■□□□ 1.33
IRF3-214ENST00000596788 CNGA1P29973 690 aa23.39■■□□□ 1.33
IRF3-214ENST00000596788 CTTNQ14247 550 aaKnown RBP23.39■■□□□ 1.33
IRF3-214ENST00000596788 E2F4Q16254 413 aa23.39■■□□□ 1.33
IRF3-214ENST00000596788 CCDC60Q8IWA6 550 aaPredicted RBP23.39■■□□□ 1.33
IRF3-214ENST00000596788 PPTC7Q8NI37 304 aa23.39■■□□□ 1.33
IRF3-214ENST00000596788 AFG1LQ8WV93 481 aa23.39■■□□□ 1.33
IRF3-214ENST00000596788 DHX58Q96C10 678 aa23.39■■□□□ 1.33
IRF3-214ENST00000596788 CDK5RAP3Q96JB5 506 aa23.39■■□□□ 1.33
IRF3-214ENST00000596788 LXNQ9BS40 222 aa23.39■■□□□ 1.33
IRF3-214ENST00000596788 CCDC39Q9UFE4 941 aa23.39■■□□□ 1.33
IRF3-214ENST00000596788 SLITRK3O94933 977 aa23.38■■□□□ 1.33
IRF3-214ENST00000596788 TCF7P36402 384 aaPredicted RBP23.38■■□□□ 1.33
IRF3-214ENST00000596788 NAALADL2Q58DX5 795 aa23.38■■□□□ 1.33
IRF3-214ENST00000596788 SEPT1Q8WYJ6 367 aa23.38■■□□□ 1.33
IRF3-214ENST00000596788 PCYT2Q99447 389 aa23.38■■□□□ 1.33
IRF3-214ENST00000596788 DACT1Q9NYF0 836 aa23.38■■□□□ 1.33
IRF3-214ENST00000596788 IGKV6D-21A0A0A0MT36 114 aa23.37■■□□□ 1.33
IRF3-214ENST00000596788 DYNC1LI2O43237 492 aaPredicted RBP23.37■■□□□ 1.33
IRF3-214ENST00000596788 ACTN4O43707 911 aaKnown RBP23.37■■□□□ 1.33
IRF3-214ENST00000596788 DUSP11O75319 330 aaKnown RBP23.37■■□□□ 1.33
IRF3-214ENST00000596788 ZNF202O95125 648 aa23.37■■□□□ 1.33
IRF3-214ENST00000596788 P4HBP07237 508 aaKnown RBP23.37■■□□□ 1.33
IRF3-214ENST00000596788 MMP3P08254 477 aa23.37■■□□□ 1.33
IRF3-214ENST00000596788 STAT6P42226 847 aa23.37■■□□□ 1.33
IRF3-214ENST00000596788 RRAGBQ5VZM2 374 aa23.37■■□□□ 1.33
IRF3-214ENST00000596788 KCNK18Q7Z418 384 aa23.37■■□□□ 1.33
IRF3-214ENST00000596788 TPH2Q8IWU9 490 aa23.37■■□□□ 1.33
IRF3-214ENST00000596788 DDX19AQ9NUU7 478 aaKnown RBP23.37■■□□□ 1.33
IRF3-214ENST00000596788 GABBR1Q9UBS5 961 aa23.37■■□□□ 1.33
IRF3-214ENST00000596788 KIAA1024Q9UPX6 916 aa23.37■■□□□ 1.33
IRF3-214ENST00000596788 Q9Y3F1 56 aa23.37■■□□□ 1.33
IRF3-214ENST00000596788 EMSYQ7Z589 1322 aa23.36■■□□□ 1.33
IRF3-214ENST00000596788 SYNRGQ9UMZ2 1314 aa23.36■■□□□ 1.33
IRF3-214ENST00000596788 BACH1O14867 736 aa23.36■■□□□ 1.33
IRF3-214ENST00000596788 LGR5O75473 907 aa23.36■■□□□ 1.33
IRF3-214ENST00000596788 HOXD8P13378 290 aaPredicted RBP23.36■■□□□ 1.33
IRF3-214ENST00000596788 QARSP47897 775 aaKnown RBP23.36■■□□□ 1.33
IRF3-214ENST00000596788 IRX5P78411 483 aaPredicted RBP23.36■■□□□ 1.33
IRF3-214ENST00000596788 KLHL40Q2TBA0 621 aa23.36■■□□□ 1.33
IRF3-214ENST00000596788 SWSAP1Q6NVH7 229 aa23.36■■□□□ 1.33
IRF3-214ENST00000596788 PDXDC2PQ6P474 469 aa23.36■■□□□ 1.33
IRF3-214ENST00000596788 PYM1Q9BRP8 204 aaKnown RBP23.36■■□□□ 1.33
IRF3-214ENST00000596788 NT5C3AQ9H0P0 336 aa23.36■■□□□ 1.33
IRF3-214ENST00000596788 UPF3AQ9H1J1 476 aaKnown RBP23.36■■□□□ 1.33
IRF3-214ENST00000596788 BLOC1S4Q9NUP1 217 aa23.36■■□□□ 1.33
IRF3-214ENST00000596788 SERTAD1Q9UHV2 236 aa23.36■■□□□ 1.33
IRF3-214ENST00000596788 ZNF862O60290 1169 aa23.35■■□□□ 1.33
IRF3-214ENST00000596788 KINO60870 393 aaKnown RBP23.35■■□□□ 1.33
IRF3-214ENST00000596788 MUTP22033 750 aa23.35■■□□□ 1.33
IRF3-214ENST00000596788 PSMC5P62195 406 aa23.35■■□□□ 1.33
IRF3-214ENST00000596788 LONRF3Q496Y0 759 aa23.35■■□□□ 1.33
IRF3-214ENST00000596788 SLC9C1Q4G0N8 1177 aa23.35■■□□□ 1.33
IRF3-214ENST00000596788 TRIM50Q86XT4 487 aa23.35■■□□□ 1.33
IRF3-214ENST00000596788 IQUBQ8NA54 791 aa23.35■■□□□ 1.33
IRF3-214ENST00000596788 AP5M1Q9H0R1 490 aa23.35■■□□□ 1.33
IRF3-214ENST00000596788 ZSWIM4Q9H7M6 989 aa23.35■■□□□ 1.33
IRF3-214ENST00000596788 ZNF302Q9NR11 478 aa23.35■■□□□ 1.33
IRF3-214ENST00000596788 STK17AQ9UEE5 414 aa23.35■■□□□ 1.33
IRF3-214ENST00000596788 DDX20Q9UHI6 824 aaKnown RBP23.35■■□□□ 1.33
IRF3-214ENST00000596788 A0A087WWV3 80 aa23.34■■□□□ 1.33
IRF3-214ENST00000596788 MYADML2A6NDP7 307 aa23.34■■□□□ 1.33
IRF3-214ENST00000596788 A6NJR5 290 aa23.34■■□□□ 1.33
IRF3-214ENST00000596788 CTAGE5O15320 804 aa23.34■■□□□ 1.33
IRF3-214ENST00000596788 TRAK2O60296 914 aa23.34■■□□□ 1.33
IRF3-214ENST00000596788 LYPLA2O95372 231 aa23.34■■□□□ 1.33
IRF3-214ENST00000596788 RARBP10826 455 aa23.34■■□□□ 1.33
IRF3-214ENST00000596788 PSMC6P62333 389 aa23.34■■□□□ 1.33
IRF3-214ENST00000596788 UTP14CQ5TAP6 766 aaKnown RBP23.34■■□□□ 1.33
IRF3-214ENST00000596788 FBXO46Q6PJ61 603 aaPredicted RBP23.34■■□□□ 1.33
IRF3-214ENST00000596788 KRBA2Q6ZNG9 492 aa23.34■■□□□ 1.33
IRF3-214ENST00000596788 AFAP1L1Q8TED9 768 aa23.34■■□□□ 1.33
IRF3-214ENST00000596788 ATP6V0A1Q93050 837 aa23.34■■□□□ 1.33
IRF3-214ENST00000596788 HMX1Q9NP08 348 aaPredicted RBP23.34■■□□□ 1.33
IRF3-214ENST00000596788 MAFBQ9Y5Q3 323 aaPredicted RBP23.34■■□□□ 1.33
IRF3-214ENST00000596788 E9PMD0 336 aa23.33■■□□□ 1.33
IRF3-214ENST00000596788 LGALS2P05162 132 aa23.33■■□□□ 1.33
IRF3-214ENST00000596788 ZNF286BP0CG31 522 aa23.33■■□□□ 1.33
IRF3-214ENST00000596788 GJA9P57773 515 aa23.33■■□□□ 1.33
IRF3-214ENST00000596788 PRKCEQ02156 737 aa23.33■■□□□ 1.33
IRF3-214ENST00000596788 FAM160B1Q5W0V3 765 aa23.33■■□□□ 1.33
IRF3-214ENST00000596788 C4orf19Q8IY42 314 aa23.33■■□□□ 1.33
IRF3-214ENST00000596788 RAD54LQ92698 747 aa23.33■■□□□ 1.33
IRF3-214ENST00000596788 TIGD1Q96MW7 591 aa23.33■■□□□ 1.33
IRF3-214ENST00000596788 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.33■■□□□ 1.333e-11■■■□□ 15.6
IRF3-214ENST00000596788 USP25Q9UHP3 1055 aa23.33■■□□□ 1.33
IRF3-214ENST00000596788 ZBTB39O15060 712 aa23.32■■□□□ 1.32
IRF3-214ENST00000596788 ADAMTS4O75173 837 aa23.32■■□□□ 1.32
IRF3-214ENST00000596788 STBD1O95210 358 aa23.32■■□□□ 1.32
IRF3-214ENST00000596788 SLFN14P0C7P3 912 aa23.32■■□□□ 1.32
IRF3-214ENST00000596788 CPT1AP50416 773 aa23.32■■□□□ 1.32
IRF3-214ENST00000596788 NKX3-2P78367 333 aa23.32■■□□□ 1.32
IRF3-214ENST00000596788 BEX3Q00994 111 aa23.32■■□□□ 1.32
IRF3-214ENST00000596788 FSCN1Q16658 493 aaKnown RBP23.32■■□□□ 1.32
IRF3-214ENST00000596788 SKOR2Q2VWA4 1001 aaPredicted RBP23.32■■□□□ 1.32
IRF3-214ENST00000596788 CNNM3Q8NE01 707 aa23.32■■□□□ 1.32
IRF3-214ENST00000596788 PIGOQ8TEQ8 1089 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms