RNA–Protein interactions for RNA: ENST00000596644.5

IRF3-211, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-211ENST00000596644 SETD4Q9NVD3 440 aa16.93■□□□□ 0.3
IRF3-211ENST00000596644 PCDHA10Q9Y5I2 948 aa16.93■□□□□ 0.3
IRF3-211ENST00000596644 MYH9P35579 1960 aaKnown RBP16.92■□□□□ 0.3
IRF3-211ENST00000596644 IGKV6D-21A0A0A0MT36 114 aa16.92■□□□□ 0.3
IRF3-211ENST00000596644 PSMD10O75832 226 aa16.92■□□□□ 0.3
IRF3-211ENST00000596644 BAG4O95429 457 aaKnown RBP16.92■□□□□ 0.3
IRF3-211ENST00000596644 SFNP31947 248 aa16.92■□□□□ 0.3
IRF3-211ENST00000596644 SLC26A2P50443 739 aa16.92■□□□□ 0.3
IRF3-211ENST00000596644 JAK3P52333 1124 aa16.92■□□□□ 0.3
IRF3-211ENST00000596644 CCL23P55773 120 aa16.92■□□□□ 0.3
IRF3-211ENST00000596644 PTK7Q13308 1070 aa16.92■□□□□ 0.3
IRF3-211ENST00000596644 PPIGQ13427 754 aaKnown RBP eCLIP16.92■□□□□ 0.33e-14■■■■■ 55.3
IRF3-211ENST00000596644 SWSAP1Q6NVH7 229 aa16.92■□□□□ 0.3
IRF3-211ENST00000596644 PDXDC2PQ6P474 469 aa16.92■□□□□ 0.3
IRF3-211ENST00000596644 POTEDQ86YR6 584 aa16.92■□□□□ 0.3
IRF3-211ENST00000596644 NOSTRINQ8IVI9 506 aa16.92■□□□□ 0.3
IRF3-211ENST00000596644 CCDC60Q8IWA6 550 aaPredicted RBP16.92■□□□□ 0.3
IRF3-211ENST00000596644 CAGE1Q8TC20 777 aa16.92■□□□□ 0.3
IRF3-211ENST00000596644 AFAP1L1Q8TED9 768 aa16.92■□□□□ 0.3
IRF3-211ENST00000596644 LMBR1Q8WVP7 490 aa16.92■□□□□ 0.3
IRF3-211ENST00000596644 FAM20AQ96MK3 541 aa16.92■□□□□ 0.3
IRF3-211ENST00000596644 CTAGE1Q96RT6 745 aa16.92■□□□□ 0.3
IRF3-211ENST00000596644 UNC45AQ9H3U1 944 aa16.92■□□□□ 0.3
IRF3-211ENST00000596644 KCNMB3Q9NPA1 279 aa16.92■□□□□ 0.3
IRF3-211ENST00000596644 DISC1Q9NRI5 854 aa16.92■□□□□ 0.3
IRF3-211ENST00000596644 NRCAMQ92823 1304 aa16.92■□□□□ 0.3
IRF3-211ENST00000596644 TANC1Q9C0D5 1861 aa16.91■□□□□ 0.3
IRF3-211ENST00000596644 KIF28PB7ZC32 967 aa16.91■□□□□ 0.3
IRF3-211ENST00000596644 PITPNM1O00562 1244 aa16.91■□□□□ 0.3
IRF3-211ENST00000596644 TBX3O15119 743 aa16.91■□□□□ 0.3
IRF3-211ENST00000596644 CSF2RAP15509 400 aa16.91■□□□□ 0.3
IRF3-211ENST00000596644 HOXC8P31273 242 aa16.91■□□□□ 0.3
IRF3-211ENST00000596644 HIC1Q14526 733 aa16.91■□□□□ 0.3
IRF3-211ENST00000596644 PLCB4Q15147 1175 aa16.91■□□□□ 0.3
IRF3-211ENST00000596644 GRIK4Q16099 956 aa16.91■□□□□ 0.3
IRF3-211ENST00000596644 LARP1BQ659C4 914 aaKnown RBP16.91■□□□□ 0.3
IRF3-211ENST00000596644 MCTP1Q6DN14 999 aa16.91■□□□□ 0.3
IRF3-211ENST00000596644 MIER3Q7Z3K6 550 aa16.91■□□□□ 0.3
IRF3-211ENST00000596644 HSCBQ8IWL3 235 aa16.91■□□□□ 0.3
IRF3-211ENST00000596644 CKAP2LQ8IYA6 745 aa16.91■□□□□ 0.3
IRF3-211ENST00000596644 WNT8AQ9H1J5 351 aa16.91■□□□□ 0.3
IRF3-211ENST00000596644 GABBR1Q9UBS5 961 aa16.91■□□□□ 0.3
IRF3-211ENST00000596644 NOL7Q9UMY1 257 aaKnown RBP16.91■□□□□ 0.3
IRF3-211ENST00000596644 WDR81Q562E7 1941 aa16.9■□□□□ 0.3
IRF3-211ENST00000596644 A0A1W2PPC1 479 aa16.9■□□□□ 0.3
IRF3-211ENST00000596644 POTEB3A0JP26 581 aa16.9■□□□□ 0.3
IRF3-211ENST00000596644 TREHO43280 583 aa16.9■□□□□ 0.3
IRF3-211ENST00000596644 NEMFO60524 1076 aa16.9■□□□□ 0.3
IRF3-211ENST00000596644 IGBP1P78318 339 aa16.9■□□□□ 0.3
IRF3-211ENST00000596644 CALCRLQ16602 461 aa16.9■□□□□ 0.3
IRF3-211ENST00000596644 POTEBQ6S5H4 581 aa16.9■□□□□ 0.3
IRF3-211ENST00000596644 SERINC5Q86VE9 423 aa16.9■□□□□ 0.3
IRF3-211ENST00000596644 SLFN12Q8IYM2 578 aa16.9■□□□□ 0.3
IRF3-211ENST00000596644 TDHQ8IZJ6 230 aa16.9■□□□□ 0.3
IRF3-211ENST00000596644 RDM1Q8NG50 284 aa16.9■□□□□ 0.3
IRF3-211ENST00000596644 DHX38Q92620 1227 aaKnown RBP16.9■□□□□ 0.3
IRF3-211ENST00000596644 SNX21Q969T3 373 aa16.9■□□□□ 0.3
IRF3-211ENST00000596644 SCLYQ96I15 445 aa16.9■□□□□ 0.3
IRF3-211ENST00000596644 RRN3P2A6NIE6 340 aa16.89■□□□□ 0.29
IRF3-211ENST00000596644 WNT7AO00755 349 aa16.89■□□□□ 0.29
IRF3-211ENST00000596644 INSRRP14616 1297 aa16.89■□□□□ 0.29
IRF3-211ENST00000596644 U2AF2P26368 475 aaKnown RBP eCLIP16.89■□□□□ 0.291e-7■■■■■ 32.6
IRF3-211ENST00000596644 MCM7P33993 719 aa16.89■□□□□ 0.29
IRF3-211ENST00000596644 HABP4Q5JVS0 413 aaKnown RBP16.89■□□□□ 0.29
IRF3-211ENST00000596644 ATP8B4Q8TF62 1192 aa16.89■□□□□ 0.29
IRF3-211ENST00000596644 HAS1Q92839 578 aa16.89■□□□□ 0.29
IRF3-211ENST00000596644 TUBE1Q9UJT0 475 aa16.89■□□□□ 0.29
IRF3-211ENST00000596644 MAFBQ9Y5Q3 323 aaPredicted RBP16.89■□□□□ 0.29
IRF3-211ENST00000596644 IGSF9BQ9UPX0 1349 aa16.89■□□□□ 0.29
IRF3-211ENST00000596644 HBP1O60381 514 aa16.88■□□□□ 0.29
IRF3-211ENST00000596644 CKBP12277 381 aa16.88■□□□□ 0.29
IRF3-211ENST00000596644 SELPP16109 830 aa16.88■□□□□ 0.29
IRF3-211ENST00000596644 THPOP40225 353 aa16.88■□□□□ 0.29
IRF3-211ENST00000596644 TRAPPC10P48553 1259 aa16.88■□□□□ 0.29
IRF3-211ENST00000596644 EPHB4P54760 987 aa16.88■□□□□ 0.29
IRF3-211ENST00000596644 PPP2R5CQ13362 524 aa16.88■□□□□ 0.29
IRF3-211ENST00000596644 TTC38Q5R3I4 469 aa16.88■□□□□ 0.29
IRF3-211ENST00000596644 LRRC8DQ7L1W4 858 aa16.88■□□□□ 0.29
IRF3-211ENST00000596644 TRMT1LQ7Z2T5 733 aaKnown RBP16.88■□□□□ 0.29
IRF3-211ENST00000596644 WNT8BQ93098 351 aa16.88■□□□□ 0.29
IRF3-211ENST00000596644 INTS4Q96HW7 963 aaKnown RBP16.88■□□□□ 0.29
IRF3-211ENST00000596644 FAM167AQ96KS9 214 aa16.88■□□□□ 0.29
IRF3-211ENST00000596644 IL23AQ9NPF7 189 aa16.88■□□□□ 0.29
IRF3-211ENST00000596644 FOXD4L1Q9NU39 408 aa16.88■□□□□ 0.29
IRF3-211ENST00000596644 VAV3Q9UKW4 847 aa16.88■□□□□ 0.29
IRF3-211ENST00000596644 SCN5AQ14524 2016 aa16.87■□□□□ 0.29
IRF3-211ENST00000596644 IQCF3P0C7M6 154 aa16.87■□□□□ 0.29
IRF3-211ENST00000596644 ACRP10323 421 aa16.87■□□□□ 0.29
IRF3-211ENST00000596644 PDCP20941 246 aa16.87■□□□□ 0.29
IRF3-211ENST00000596644 RFC2P35250 354 aa16.87■□□□□ 0.29
IRF3-211ENST00000596644 ADAM17P78536 824 aa16.87■□□□□ 0.29
IRF3-211ENST00000596644 RBL2Q08999 1139 aa16.87■□□□□ 0.29
IRF3-211ENST00000596644 ORC2Q13416 577 aaPredicted RBP16.87■□□□□ 0.29
IRF3-211ENST00000596644 ZNF174Q15697 407 aa16.87■□□□□ 0.29
IRF3-211ENST00000596644 TRIM71Q2Q1W2 868 aaKnown RBP16.87■□□□□ 0.29
IRF3-211ENST00000596644 NCAPH2Q6IBW4 605 aa16.87■□□□□ 0.29
IRF3-211ENST00000596644 TAF2Q6P1X5 1199 aa16.87■□□□□ 0.29
IRF3-211ENST00000596644 PSRC1Q6PGN9 363 aaPredicted RBP16.87■□□□□ 0.29
IRF3-211ENST00000596644 B3GNT9Q6UX72 402 aa16.87■□□□□ 0.29
IRF3-211ENST00000596644 DEFB128Q7Z7B8 93 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms