RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 PLPPR4Q7Z2D5 763 aa9.41□□□□□ -0.9
VRK3-211ENST00000596445 TRIM50Q86XT4 487 aa9.41□□□□□ -0.9
VRK3-211ENST00000596445 CCDC60Q8IWA6 550 aaPredicted RBP9.41□□□□□ -0.9
VRK3-211ENST00000596445 SLC43A3Q8NBI5 491 aa9.41□□□□□ -0.9
VRK3-211ENST00000596445 AFAP1L1Q8TED9 768 aa9.41□□□□□ -0.9
VRK3-211ENST00000596445 GLG1Q92896 1179 aa9.41□□□□□ -0.9
VRK3-211ENST00000596445 ZNF396Q96N95 335 aaPredicted RBP9.41□□□□□ -0.9
VRK3-211ENST00000596445 ERAP1Q9NZ08 941 aa9.41□□□□□ -0.9
VRK3-211ENST00000596445 MAFBQ9Y5Q3 323 aaPredicted RBP9.41□□□□□ -0.9
VRK3-211ENST00000596445 CLIC4Q9Y696 253 aa9.41□□□□□ -0.9
VRK3-211ENST00000596445 MROH7Q68CQ1 1323 aa9.4□□□□□ -0.9
VRK3-211ENST00000596445 EML1O00423 815 aa9.4□□□□□ -0.9
VRK3-211ENST00000596445 TECP42680 631 aa9.4□□□□□ -0.9
VRK3-211ENST00000596445 CHMP4BP1P59074 171 aa9.4□□□□□ -0.9
VRK3-211ENST00000596445 PTPN11Q06124 597 aaPredicted RBP9.4□□□□□ -0.9
VRK3-211ENST00000596445 PDIA5Q14554 519 aa9.4□□□□□ -0.9
VRK3-211ENST00000596445 PTPAQ15257 358 aa9.4□□□□□ -0.9
VRK3-211ENST00000596445 EPHA7Q15375 998 aa9.4□□□□□ -0.9
VRK3-211ENST00000596445 LRRC26Q2I0M4 334 aa9.4□□□□□ -0.9
VRK3-211ENST00000596445 NCAPH2Q6IBW4 605 aa9.4□□□□□ -0.9
VRK3-211ENST00000596445 PDXDC2PQ6P474 469 aa9.4□□□□□ -0.9
VRK3-211ENST00000596445 DTHD1Q6ZMT9 781 aa9.4□□□□□ -0.9
VRK3-211ENST00000596445 IGSF22Q8N9C0 903 aa9.4□□□□□ -0.9
VRK3-211ENST00000596445 USP28Q96RU2 1077 aa9.4□□□□□ -0.9
VRK3-211ENST00000596445 HTATIP2Q9BUP3 242 aa9.4□□□□□ -0.9
VRK3-211ENST00000596445 RAB34Q9BZG1 259 aa9.4□□□□□ -0.9
VRK3-211ENST00000596445 FTOQ9C0B1 505 aaKnown RBP eCLIP9.4□□□□□ -0.9
VRK3-211ENST00000596445 ZNF302Q9NR11 478 aa9.4□□□□□ -0.9
VRK3-211ENST00000596445 GABBR1Q9UBS5 961 aa9.4□□□□□ -0.9
VRK3-211ENST00000596445 CIZ1Q9ULV3 898 aaPredicted RBP9.4□□□□□ -0.9
VRK3-211ENST00000596445 ATP6V1DQ9Y5K8 247 aa9.4□□□□□ -0.9
VRK3-211ENST00000596445 MORC2Q9Y6X9 1032 aaPredicted RBP9.4□□□□□ -0.9
VRK3-211ENST00000596445 IGSF9BQ9UPX0 1349 aa9.39□□□□□ -0.91
VRK3-211ENST00000596445 POTEMA6NI47 508 aa9.39□□□□□ -0.91
VRK3-211ENST00000596445 P4HBP07237 508 aaKnown RBP9.39□□□□□ -0.91
VRK3-211ENST00000596445 MARK3P27448 753 aa9.39□□□□□ -0.91
VRK3-211ENST00000596445 QARSP47897 775 aaKnown RBP9.39□□□□□ -0.91
VRK3-211ENST00000596445 NASPP49321 788 aaPredicted RBP9.39□□□□□ -0.91
VRK3-211ENST00000596445 RTP1P59025 263 aa9.39□□□□□ -0.91
VRK3-211ENST00000596445 CEBPZQ03701 1054 aaKnown RBP9.39□□□□□ -0.91
VRK3-211ENST00000596445 SLC39A14Q15043 492 aa9.39□□□□□ -0.91
VRK3-211ENST00000596445 PLCB4Q15147 1175 aa9.39□□□□□ -0.91
VRK3-211ENST00000596445 IL17AQ16552 155 aa9.39□□□□□ -0.91
VRK3-211ENST00000596445 FOXD4L6Q3SYB3 417 aaPredicted RBP9.39□□□□□ -0.91
VRK3-211ENST00000596445 FAM47CQ5HY64 1035 aa9.39□□□□□ -0.91
VRK3-211ENST00000596445 FOXD4L3Q6VB84 417 aaPredicted RBP9.39□□□□□ -0.91
VRK3-211ENST00000596445 ANKRD33Q7Z3H0 272 aa9.39□□□□□ -0.91
VRK3-211ENST00000596445 SESTD1Q86VW0 696 aa9.39□□□□□ -0.91
VRK3-211ENST00000596445 C7orf31Q8N865 590 aa9.39□□□□□ -0.91
VRK3-211ENST00000596445 BANK1Q8NDB2 785 aa9.39□□□□□ -0.91
VRK3-211ENST00000596445 NEK9Q8TD19 979 aa9.39□□□□□ -0.91
VRK3-211ENST00000596445 TNPO1Q92973 898 aaKnown RBP9.39□□□□□ -0.91
VRK3-211ENST00000596445 ATP6V0A1Q93050 837 aa9.39□□□□□ -0.91
VRK3-211ENST00000596445 TOX2Q96NM4 488 aa9.39□□□□□ -0.91
VRK3-211ENST00000596445 IPO9Q96P70 1041 aaKnown RBP9.39□□□□□ -0.91
VRK3-211ENST00000596445 EIF2AK1Q9BQI3 630 aaKnown RBP9.39□□□□□ -0.91
VRK3-211ENST00000596445 RNPEPQ9H4A4 650 aa9.39□□□□□ -0.91
VRK3-211ENST00000596445 TFIP11Q9UBB9 837 aaKnown RBP9.39□□□□□ -0.91
VRK3-211ENST00000596445 HDAC6Q9UBN7 1215 aa9.39□□□□□ -0.91
VRK3-211ENST00000596445 CFAP45Q9UL16 551 aa9.39□□□□□ -0.91
VRK3-211ENST00000596445 STK24Q9Y6E0 443 aa9.39□□□□□ -0.91
VRK3-211ENST00000596445 NRCAMQ92823 1304 aa9.38□□□□□ -0.91
VRK3-211ENST00000596445 POTEB3A0JP26 581 aa9.38□□□□□ -0.91
VRK3-211ENST00000596445 VWA3AA6NCI4 1184 aa9.38□□□□□ -0.91
VRK3-211ENST00000596445 DCDC2CA8MYV0 355 aa9.38□□□□□ -0.91
VRK3-211ENST00000596445 ZNF862O60290 1169 aa9.38□□□□□ -0.91
VRK3-211ENST00000596445 HBP1O60381 514 aa9.38□□□□□ -0.91
VRK3-211ENST00000596445 DKC1O60832 514 aaKnown RBP eCLIP9.38□□□□□ -0.91
VRK3-211ENST00000596445 SLITRK3O94933 977 aa9.38□□□□□ -0.91
VRK3-211ENST00000596445 YEATS4O95619 227 aa9.38□□□□□ -0.91
VRK3-211ENST00000596445 SMIM10L2AP0DMW4 78 aa9.38□□□□□ -0.91
VRK3-211ENST00000596445 SMIM10L2BP0DMW5 78 aa9.38□□□□□ -0.91
VRK3-211ENST00000596445 GNAT1P11488 350 aa9.38□□□□□ -0.91
VRK3-211ENST00000596445 ATP4AP20648 1035 aa9.38□□□□□ -0.91
VRK3-211ENST00000596445 HOXC8P31273 242 aa9.38□□□□□ -0.91
VRK3-211ENST00000596445 PSMC5P62195 406 aa9.38□□□□□ -0.91
VRK3-211ENST00000596445 TLE2Q04725 743 aa9.38□□□□□ -0.91
VRK3-211ENST00000596445 DNM1Q05193 864 aaKnown RBP9.38□□□□□ -0.91
VRK3-211ENST00000596445 STK38Q15208 465 aa9.38□□□□□ -0.91
VRK3-211ENST00000596445 UGCGQ16739 394 aa9.38□□□□□ -0.91
VRK3-211ENST00000596445 TRIM60Q495X7 471 aa9.38□□□□□ -0.91
VRK3-211ENST00000596445 POTEBQ6S5H4 581 aa9.38□□□□□ -0.91
VRK3-211ENST00000596445 CKAP2LQ8IYA6 745 aa9.38□□□□□ -0.91
VRK3-211ENST00000596445 LINC00301Q8NCQ3 95 aa9.38□□□□□ -0.91
VRK3-211ENST00000596445 ERMNQ8TAM6 284 aa9.38□□□□□ -0.91
VRK3-211ENST00000596445 ATP8B4Q8TF62 1192 aa9.38□□□□□ -0.91
VRK3-211ENST00000596445 PPP1R13LQ8WUF5 828 aa9.38□□□□□ -0.91
VRK3-211ENST00000596445 BBXQ8WY36 941 aaPredicted RBP9.38□□□□□ -0.91
VRK3-211ENST00000596445 DYDC2Q96IM9 177 aa9.38□□□□□ -0.91
VRK3-211ENST00000596445 FAM167AQ96KS9 214 aa9.38□□□□□ -0.91
VRK3-211ENST00000596445 HSD17B14Q9BPX1 270 aa9.38□□□□□ -0.91
VRK3-211ENST00000596445 LXNQ9BS40 222 aa9.38□□□□□ -0.91
VRK3-211ENST00000596445 POLR3CQ9BUI4 534 aaPredicted RBP9.38□□□□□ -0.91
VRK3-211ENST00000596445 ZSWIM4Q9H7M6 989 aa9.38□□□□□ -0.91
VRK3-211ENST00000596445 TUFT1Q9NNX1 390 aa9.38□□□□□ -0.91
VRK3-211ENST00000596445 RGL1Q9NZL6 768 aa9.38□□□□□ -0.91
VRK3-211ENST00000596445 LRWD1Q9UFC0 647 aa9.38□□□□□ -0.91
VRK3-211ENST00000596445 GTF2IRD1Q9UHL9 959 aa9.38□□□□□ -0.91
VRK3-211ENST00000596445 TRPC6Q9Y210 931 aa9.38□□□□□ -0.91
VRK3-211ENST00000596445 ATP11BQ9Y2G3 1177 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms