RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 LY9Q9HBG7 655 aa11.47□□□□□ -0.57
LIG1-209ENST00000596104 ERAP1Q9NZ08 941 aa11.47□□□□□ -0.57
LIG1-209ENST00000596104 PLAGL2Q9UPG8 496 aa11.47□□□□□ -0.57
LIG1-209ENST00000596104 UBIAD1Q9Y5Z9 338 aa11.47□□□□□ -0.57
LIG1-209ENST00000596104 CDY2AQ9Y6F7 541 aa11.47□□□□□ -0.57
LIG1-209ENST00000596104 MYO7AQ13402 2215 aa11.47□□□□□ -0.57
LIG1-209ENST00000596104 MYH6P13533 1939 aa11.47□□□□□ -0.57
LIG1-209ENST00000596104 LINC01565O15544 149 aa11.46□□□□□ -0.57
LIG1-209ENST00000596104 SGSM2O43147 1006 aa11.46□□□□□ -0.57
LIG1-209ENST00000596104 DDAH1O94760 285 aa11.46□□□□□ -0.57
LIG1-209ENST00000596104 PLEKHA8P1O95397 391 aa11.46□□□□□ -0.57
LIG1-209ENST00000596104 ADAM15Q13444 863 aa11.46□□□□□ -0.57
LIG1-209ENST00000596104 HERC4Q5GLZ8 1057 aaPredicted RBP11.46□□□□□ -0.57
LIG1-209ENST00000596104 HFE2Q6ZVN8 426 aa11.46□□□□□ -0.57
LIG1-209ENST00000596104 RTN4RL1Q86UN2 441 aaPredicted RBP11.46□□□□□ -0.57
LIG1-209ENST00000596104 SRBD1Q8N5C6 995 aaKnown RBP11.46□□□□□ -0.57
LIG1-209ENST00000596104 CTCFLQ8NI51 663 aaPredicted RBP11.46□□□□□ -0.57
LIG1-209ENST00000596104 RUFY2Q8WXA3 655 aa11.46□□□□□ -0.57
LIG1-209ENST00000596104 P2RX5Q93086 422 aa11.46□□□□□ -0.57
LIG1-209ENST00000596104 ZBTB10Q96DT7 871 aa11.46□□□□□ -0.57
LIG1-209ENST00000596104 CDHR1Q96JP9 859 aa11.46□□□□□ -0.57
LIG1-209ENST00000596104 MSLNLQ96KJ4 702 aa11.46□□□□□ -0.57
LIG1-209ENST00000596104 PCYT2Q99447 389 aa11.46□□□□□ -0.57
LIG1-209ENST00000596104 POP1Q99575 1024 aaKnown RBP11.46□□□□□ -0.57
LIG1-209ENST00000596104 UPF3BQ9BZI7 483 aaKnown RBP11.46□□□□□ -0.57
LIG1-209ENST00000596104 SMARCAD1Q9H4L7 1026 aa11.46□□□□□ -0.57
LIG1-209ENST00000596104 ALG13Q9NP73 1137 aaKnown RBP11.46□□□□□ -0.57
LIG1-209ENST00000596104 MRPL42Q9Y6G3 142 aaKnown RBP11.46□□□□□ -0.57
LIG1-209ENST00000596104 BAZ2BQ9UIF8 2168 aaKnown RBP11.45□□□□□ -0.58
LIG1-209ENST00000596104 EYA4O95677 639 aa11.45□□□□□ -0.58
LIG1-209ENST00000596104 DNAJB1P25685 340 aa11.45□□□□□ -0.58
LIG1-209ENST00000596104 CD52P31358 61 aa11.45□□□□□ -0.58
LIG1-209ENST00000596104 KIF5BP33176 963 aa11.45□□□□□ -0.58
LIG1-209ENST00000596104 MRE11P49959 708 aa11.45□□□□□ -0.58
LIG1-209ENST00000596104 MRPS6P82932 125 aaKnown RBP11.45□□□□□ -0.58
LIG1-209ENST00000596104 MTMR1Q13613 665 aa11.45□□□□□ -0.58
LIG1-209ENST00000596104 COL9A3Q14050 684 aaPredicted RBP11.45□□□□□ -0.58
LIG1-209ENST00000596104 RNF135Q8IUD6 432 aa11.45□□□□□ -0.58
LIG1-209ENST00000596104 CMTR2Q8IYT2 770 aaKnown RBP11.45□□□□□ -0.58
LIG1-209ENST00000596104 SPPL3Q8TCT6 385 aa11.45□□□□□ -0.58
LIG1-209ENST00000596104 GLG1Q92896 1179 aa11.45□□□□□ -0.58
LIG1-209ENST00000596104 MAP4K1Q92918 833 aa11.45□□□□□ -0.58
LIG1-209ENST00000596104 LZTS2Q9BRK4 669 aa11.45□□□□□ -0.58
LIG1-209ENST00000596104 MTA3Q9BTC8 594 aa11.45□□□□□ -0.58
LIG1-209ENST00000596104 PSTPIP2Q9H939 334 aa11.45□□□□□ -0.58
LIG1-209ENST00000596104 JADE2Q9NQC1 790 aa11.45□□□□□ -0.58
LIG1-209ENST00000596104 SEC63Q9UGP8 760 aaKnown RBP11.45□□□□□ -0.58
LIG1-209ENST00000596104 MUTYHQ9UIF7 546 aa11.45□□□□□ -0.58
LIG1-209ENST00000596104 CD207Q9UJ71 328 aa11.45□□□□□ -0.58
LIG1-209ENST00000596104 SQORQ9Y6N5 450 aa11.45□□□□□ -0.58
LIG1-209ENST00000596104 RRN3P2A6NIE6 340 aa11.44□□□□□ -0.58
LIG1-209ENST00000596104 CSPG5O95196 566 aa11.44□□□□□ -0.58
LIG1-209ENST00000596104 RPLP2P05387 115 aaKnown RBP11.44□□□□□ -0.58
LIG1-209ENST00000596104 ITGB1P05556 798 aa11.44□□□□□ -0.58
LIG1-209ENST00000596104 INSRRP14616 1297 aa11.44□□□□□ -0.58
LIG1-209ENST00000596104 GNAQP50148 359 aa11.44□□□□□ -0.58
LIG1-209ENST00000596104 IGBP1P78318 339 aa11.44□□□□□ -0.58
LIG1-209ENST00000596104 UBE2SQ16763 222 aa11.44□□□□□ -0.58
LIG1-209ENST00000596104 NAALADL2Q58DX5 795 aa11.44□□□□□ -0.58
LIG1-209ENST00000596104 ADGRD2Q7Z7M1 963 aa11.44□□□□□ -0.58
LIG1-209ENST00000596104 NPAS4Q8IUM7 802 aa11.44□□□□□ -0.58
LIG1-209ENST00000596104 CMTR1Q8N1G2 835 aaKnown RBP11.44□□□□□ -0.58
LIG1-209ENST00000596104 FTHL17Q9BXU8 183 aa11.44□□□□□ -0.58
LIG1-209ENST00000596104 FAM49AQ9H0Q0 323 aaPredicted RBP11.44□□□□□ -0.58
LIG1-209ENST00000596104 IGFLR1Q9H665 355 aa11.44□□□□□ -0.58
LIG1-209ENST00000596104 PKD2L1Q9P0L9 805 aa11.44□□□□□ -0.58
LIG1-209ENST00000596104 CLEC1BQ9P126 229 aa11.44□□□□□ -0.58
LIG1-209ENST00000596104 IGSF9BQ9UPX0 1349 aa11.43□□□□□ -0.58
LIG1-209ENST00000596104 RALGAPA2Q2PPJ7 1873 aa11.43□□□□□ -0.58
LIG1-209ENST00000596104 STXBP3O00186 592 aa11.43□□□□□ -0.58
LIG1-209ENST00000596104 SH2B2O14492 632 aaPredicted RBP11.43□□□□□ -0.58
LIG1-209ENST00000596104 MAFGO15525 162 aa11.43□□□□□ -0.58
LIG1-209ENST00000596104 PRC1O43663 620 aa11.43□□□□□ -0.58
LIG1-209ENST00000596104 GLP2RO95838 553 aa11.43□□□□□ -0.58
LIG1-209ENST00000596104 NDUFV1P49821 464 aa11.43□□□□□ -0.58
LIG1-209ENST00000596104 IER5Q5VY09 327 aa11.43□□□□□ -0.58
LIG1-209ENST00000596104 EFHBQ8N7U6 833 aa11.43□□□□□ -0.58
LIG1-209ENST00000596104 KLHL23Q8NBE8 558 aa11.43□□□□□ -0.58
LIG1-209ENST00000596104 SMRP1Q8NCR6 262 aa11.43□□□□□ -0.58
LIG1-209ENST00000596104 EDAQ92838 391 aa11.43□□□□□ -0.58
LIG1-209ENST00000596104 TMX1Q9H3N1 280 aa11.43□□□□□ -0.58
LIG1-209ENST00000596104 JPH1Q9HDC5 661 aaPredicted RBP11.43□□□□□ -0.58
LIG1-209ENST00000596104 PADI3Q9ULW8 664 aa11.43□□□□□ -0.58
LIG1-209ENST00000596104 PCDHA6Q9UN73 950 aa11.43□□□□□ -0.58
LIG1-209ENST00000596104 PCDHA8Q9Y5H6 950 aa11.43□□□□□ -0.58
LIG1-209ENST00000596104 PCDHA2Q9Y5H9 948 aa11.43□□□□□ -0.58
LIG1-209ENST00000596104 TRPV2Q9Y5S1 764 aa11.43□□□□□ -0.58
LIG1-209ENST00000596104 RBM8AQ9Y5S9 174 aaKnown RBP11.43□□□□□ -0.58
LIG1-209ENST00000596104 KDM3AQ9Y4C1 1321 aa11.42□□□□□ -0.58
LIG1-209ENST00000596104 TTC3P53804 2025 aa11.42□□□□□ -0.58
LIG1-209ENST00000596104 hCG_1642624A0A1W2PR95 340 aa11.42□□□□□ -0.58
LIG1-209ENST00000596104 SPDYE3A6NKU9 549 aa11.42□□□□□ -0.58
LIG1-209ENST00000596104 SCG2P13521 617 aa11.42□□□□□ -0.58
LIG1-209ENST00000596104 RXRAP19793 462 aa11.42□□□□□ -0.58
LIG1-209ENST00000596104 GATMP50440 423 aa11.42□□□□□ -0.58
LIG1-209ENST00000596104 TMEM62Q0P6H9 643 aa11.42□□□□□ -0.58
LIG1-209ENST00000596104 COASYQ13057 564 aa11.42□□□□□ -0.58
LIG1-209ENST00000596104 PLCB4Q15147 1175 aa11.42□□□□□ -0.58
LIG1-209ENST00000596104 PAN2Q504Q3 1202 aaKnown RBP11.42□□□□□ -0.58
LIG1-209ENST00000596104 CASC1Q6TDU7 716 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms