RNA–Protein interactions for RNA: ENST00000595874.1

SHKBP1-210, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 203 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-210ENST00000595874 GNAT1P11488 350 aa11.73□□□□□ -0.53
SHKBP1-210ENST00000595874 SREBF1P36956 1147 aa11.73□□□□□ -0.53
SHKBP1-210ENST00000595874 SSRP1Q08945 709 aaKnown RBP11.73□□□□□ -0.53
SHKBP1-210ENST00000595874 RBL2Q08999 1139 aa11.73□□□□□ -0.53
SHKBP1-210ENST00000595874 NTRK3Q16288 839 aa11.73□□□□□ -0.53
SHKBP1-210ENST00000595874 CKAP2LQ8IYA6 745 aa11.73□□□□□ -0.53
SHKBP1-210ENST00000595874 REXO1Q8N1G1 1221 aaKnown RBP11.73□□□□□ -0.53
SHKBP1-210ENST00000595874 SEPT8Q92599 483 aa11.73□□□□□ -0.53
SHKBP1-210ENST00000595874 ZNF668Q96K58 619 aaPredicted RBP11.73□□□□□ -0.53
SHKBP1-210ENST00000595874 SMARCAD1Q9H4L7 1026 aa11.73□□□□□ -0.53
SHKBP1-210ENST00000595874 ZSWIM6Q9HCJ5 1215 aa11.73□□□□□ -0.53
SHKBP1-210ENST00000595874 GJB4Q9NTQ9 266 aa11.73□□□□□ -0.53
SHKBP1-210ENST00000595874 TUBE1Q9UJT0 475 aa11.73□□□□□ -0.53
SHKBP1-210ENST00000595874 KCNJ14Q9UNX9 436 aa11.73□□□□□ -0.53
SHKBP1-210ENST00000595874 CDY2AQ9Y6F7 541 aa11.73□□□□□ -0.53
SHKBP1-210ENST00000595874 MICAL3Q7RTP6 2002 aa11.72□□□□□ -0.53
SHKBP1-210ENST00000595874 ABHD14A-ACY1A0A1B0GW23 586 aa11.72□□□□□ -0.53
SHKBP1-210ENST00000595874 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.72□□□□□ -0.53
SHKBP1-210ENST00000595874 hCG_1984214I3L0E3 225 aa11.72□□□□□ -0.53
SHKBP1-210ENST00000595874 CPLX1O14810 134 aa11.72□□□□□ -0.53
SHKBP1-210ENST00000595874 AMHP03971 560 aa11.72□□□□□ -0.53
SHKBP1-210ENST00000595874 HOXC8P31273 242 aa11.72□□□□□ -0.53
SHKBP1-210ENST00000595874 STAT5BP51692 787 aa11.72□□□□□ -0.53
SHKBP1-210ENST00000595874 ADAM17P78536 824 aa11.72□□□□□ -0.53
SHKBP1-210ENST00000595874 TFF2Q03403 129 aa11.72□□□□□ -0.53
SHKBP1-210ENST00000595874 GRB10Q13322 594 aa11.72□□□□□ -0.53
SHKBP1-210ENST00000595874 AP3B2Q13367 1082 aa11.72□□□□□ -0.53
SHKBP1-210ENST00000595874 MARCH8Q5T0T0 291 aa11.72□□□□□ -0.53
SHKBP1-210ENST00000595874 SWSAP1Q6NVH7 229 aa11.72□□□□□ -0.53
SHKBP1-210ENST00000595874 CCDC60Q8IWA6 550 aaPredicted RBP11.72□□□□□ -0.53
SHKBP1-210ENST00000595874 ZNF713Q8N859 430 aaPredicted RBP11.72□□□□□ -0.53
SHKBP1-210ENST00000595874 PHOSPHO2Q8TCD6 241 aa11.72□□□□□ -0.53
SHKBP1-210ENST00000595874 C17orf80Q9BSJ5 609 aa11.72□□□□□ -0.53
SHKBP1-210ENST00000595874 ZNF577Q9BSK1 485 aa11.72□□□□□ -0.53
SHKBP1-210ENST00000595874 TCEAL9Q9UHQ7 104 aa11.72□□□□□ -0.53
SHKBP1-210ENST00000595874 SAMM50Q9Y512 469 aa11.72□□□□□ -0.53
SHKBP1-210ENST00000595874 NRCAMQ92823 1304 aa11.71□□□□□ -0.53
SHKBP1-210ENST00000595874 LOXHD1Q8IVV2 1947 aa11.71□□□□□ -0.53
SHKBP1-210ENST00000595874 IGLV3-22A0A075B6J6 115 aa11.71□□□□□ -0.53
SHKBP1-210ENST00000595874 LINC01553A4QN01 128 aa11.71□□□□□ -0.53
SHKBP1-210ENST00000595874 MEIS1O00470 390 aa11.71□□□□□ -0.53
SHKBP1-210ENST00000595874 GJB5O95377 273 aa11.71□□□□□ -0.53
SHKBP1-210ENST00000595874 SEC24BO95487 1268 aa11.71□□□□□ -0.53
SHKBP1-210ENST00000595874 IFNAR1P17181 557 aa11.71□□□□□ -0.53
SHKBP1-210ENST00000595874 CD52P31358 61 aa11.71□□□□□ -0.53
SHKBP1-210ENST00000595874 SCRN1Q12765 414 aa11.71□□□□□ -0.53
SHKBP1-210ENST00000595874 TMEM266Q2M3C6 531 aa11.71□□□□□ -0.53
SHKBP1-210ENST00000595874 PLEKHG4Q58EX7 1191 aa11.71□□□□□ -0.53
SHKBP1-210ENST00000595874 PDXDC2PQ6P474 469 aa11.71□□□□□ -0.53
SHKBP1-210ENST00000595874 NECAB1Q8N987 351 aa11.71□□□□□ -0.53
SHKBP1-210ENST00000595874 RNF26Q9BY78 433 aaPredicted RBP11.71□□□□□ -0.53
SHKBP1-210ENST00000595874 AGXT2Q9BYV1 514 aa11.71□□□□□ -0.53
SHKBP1-210ENST00000595874 IFIH1Q9BYX4 1025 aaKnown RBP11.71□□□□□ -0.53
SHKBP1-210ENST00000595874 ZMYND12Q9H0C1 365 aa11.71□□□□□ -0.53
SHKBP1-210ENST00000595874 ZNF302Q9NR11 478 aa11.71□□□□□ -0.53
SHKBP1-210ENST00000595874 MTCH2Q9Y6C9 303 aa11.71□□□□□ -0.53
SHKBP1-210ENST00000595874 NID2Q14112 1375 aa11.7□□□□□ -0.54
SHKBP1-210ENST00000595874 NFASCO94856 1347 aa11.7□□□□□ -0.54
SHKBP1-210ENST00000595874 EMSYQ7Z589 1322 aa11.7□□□□□ -0.54
SHKBP1-210ENST00000595874 POTEB3A0JP26 581 aa11.7□□□□□ -0.54
SHKBP1-210ENST00000595874 GTPBP6O43824 516 aaPredicted RBP11.7□□□□□ -0.54
SHKBP1-210ENST00000595874 LARGE1O95461 756 aa11.7□□□□□ -0.54
SHKBP1-210ENST00000595874 TDP2O95551 362 aa11.7□□□□□ -0.54
SHKBP1-210ENST00000595874 ATP4AP20648 1035 aa11.7□□□□□ -0.54
SHKBP1-210ENST00000595874 RCAN1P53805 252 aa11.7□□□□□ -0.54
SHKBP1-210ENST00000595874 MGAT3Q09327 533 aa11.7□□□□□ -0.54
SHKBP1-210ENST00000595874 LPIN1Q14693 890 aa11.7□□□□□ -0.54
SHKBP1-210ENST00000595874 POTEBQ6S5H4 581 aa11.7□□□□□ -0.54
SHKBP1-210ENST00000595874 TRIM22Q8IYM9 498 aa11.7□□□□□ -0.54
SHKBP1-210ENST00000595874 CCDC148Q8NFR7 591 aa11.7□□□□□ -0.54
SHKBP1-210ENST00000595874 TBCKQ8TEA7 893 aa11.7□□□□□ -0.54
SHKBP1-210ENST00000595874 CCDC12Q8WUD4 166 aaPredicted RBP11.7□□□□□ -0.54
SHKBP1-210ENST00000595874 YME1L1Q96TA2 773 aa11.7□□□□□ -0.54
SHKBP1-210ENST00000595874 RAD9AQ99638 391 aa11.7□□□□□ -0.54
SHKBP1-210ENST00000595874 SH2D3AQ9BRG2 576 aa11.7□□□□□ -0.54
SHKBP1-210ENST00000595874 AGO3Q9H9G7 860 aaKnown RBP11.7□□□□□ -0.54
SHKBP1-210ENST00000595874 CDHR5Q9HBB8 845 aa11.7□□□□□ -0.54
SHKBP1-210ENST00000595874 GABBR1Q9UBS5 961 aa11.7□□□□□ -0.54
SHKBP1-210ENST00000595874 IPO5O00410 1097 aaKnown RBP11.69□□□□□ -0.54
SHKBP1-210ENST00000595874 MAFGO15525 162 aa11.69□□□□□ -0.54
SHKBP1-210ENST00000595874 DHX15O43143 795 aaKnown RBP11.69□□□□□ -0.54
SHKBP1-210ENST00000595874 EDIL3O43854 480 aa11.69□□□□□ -0.54
SHKBP1-210ENST00000595874 PARNO95453 639 aaKnown RBP11.69□□□□□ -0.54
SHKBP1-210ENST00000595874 KLRC1P26715 233 aa11.69□□□□□ -0.54
SHKBP1-210ENST00000595874 GNA11P29992 359 aa11.69□□□□□ -0.54
SHKBP1-210ENST00000595874 GATMP50440 423 aa11.69□□□□□ -0.54
SHKBP1-210ENST00000595874 AK2P54819 239 aa11.69□□□□□ -0.54
SHKBP1-210ENST00000595874 MRPS6P82932 125 aaKnown RBP11.69□□□□□ -0.54
SHKBP1-210ENST00000595874 PAN2Q504Q3 1202 aaKnown RBP11.69□□□□□ -0.54
SHKBP1-210ENST00000595874 FAM160B1Q5W0V3 765 aa11.69□□□□□ -0.54
SHKBP1-210ENST00000595874 MTHFD1LQ6UB35 978 aa11.69□□□□□ -0.54
SHKBP1-210ENST00000595874 ABHD15Q6UXT9 468 aa11.69□□□□□ -0.54
SHKBP1-210ENST00000595874 RSPH3Q86UC2 560 aa11.69□□□□□ -0.54
SHKBP1-210ENST00000595874 NECAB3Q96P71 396 aaPredicted RBP11.69□□□□□ -0.54
SHKBP1-210ENST00000595874 GLT8D2Q9H1C3 349 aa11.69□□□□□ -0.54
SHKBP1-210ENST00000595874 SLKQ9H2G2 1235 aaPredicted RBP11.69□□□□□ -0.54
SHKBP1-210ENST00000595874 THEGQ9P2T0 379 aa11.69□□□□□ -0.54
SHKBP1-210ENST00000595874 TPCN1Q9ULQ1 816 aa11.69□□□□□ -0.54
SHKBP1-210ENST00000595874 TRPV2Q9Y5S1 764 aa11.69□□□□□ -0.54
SHKBP1-210ENST00000595874 EYSQ5T1H1 3165 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms