RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 GJA10Q969M2 543 aa22.12■■□□□ 1.13
LSM4-203ENST00000593829 FAM20AQ96MK3 541 aa22.12■■□□□ 1.13
LSM4-203ENST00000593829 TRPV6Q9H1D0 765 aa22.12■■□□□ 1.13
LSM4-203ENST00000593829 KCNMB3Q9NPA1 279 aa22.12■■□□□ 1.13
LSM4-203ENST00000593829 TMEM39AQ9NV64 488 aa22.12■■□□□ 1.13
LSM4-203ENST00000593829 TBX3O15119 743 aa22.11■■□□□ 1.13
LSM4-203ENST00000593829 ZNF500O60304 480 aaPredicted RBP22.11■■□□□ 1.13
LSM4-203ENST00000593829 B4GALT4O60513 344 aa22.11■■□□□ 1.13
LSM4-203ENST00000593829 LGR5O75473 907 aa22.11■■□□□ 1.13
LSM4-203ENST00000593829 SYN1P17600 705 aa22.11■■□□□ 1.13
LSM4-203ENST00000593829 ABHD15Q6UXT9 468 aa22.11■■□□□ 1.13
LSM4-203ENST00000593829 ERAP1Q9NZ08 941 aa22.11■■□□□ 1.13
LSM4-203ENST00000593829 HDAC6Q9UBN7 1215 aa22.11■■□□□ 1.13
LSM4-203ENST00000593829 NOL7Q9UMY1 257 aaKnown RBP22.11■■□□□ 1.13
LSM4-203ENST00000593829 MARCH6O60337 910 aa22.1■■□□□ 1.13
LSM4-203ENST00000593829 SUPT20HL2P0C7V6 817 aa22.1■■□□□ 1.13
LSM4-203ENST00000593829 TRAPPC10P48553 1259 aa22.1■■□□□ 1.13
LSM4-203ENST00000593829 CAVIN1Q6NZI2 390 aaKnown RBP22.1■■□□□ 1.13
LSM4-203ENST00000593829 MIS18BP1Q6P0N0 1132 aa22.1■■□□□ 1.13
LSM4-203ENST00000593829 POTEDQ86YR6 584 aa22.1■■□□□ 1.13
LSM4-203ENST00000593829 TRMT13Q9NUP7 481 aaKnown RBP22.1■■□□□ 1.13
LSM4-203ENST00000593829 WNT7AO00755 349 aa22.1■■□□□ 1.13
LSM4-203ENST00000593829 SH3RF1Q7Z6J0 888 aa22.1■■□□□ 1.13
LSM4-203ENST00000593829 PCYT2Q99447 389 aa22.1■■□□□ 1.13
LSM4-203ENST00000593829 GTF2IRD1Q9UHL9 959 aa22.1■■□□□ 1.13
LSM4-203ENST00000593829 SAMM50Q9Y512 469 aa22.1■■□□□ 1.13
LSM4-203ENST00000593829 PCDHA10Q9Y5I2 948 aa22.1■■□□□ 1.13
LSM4-203ENST00000593829 IGKV6D-21A0A0A0MT36 114 aa22.09■■□□□ 1.13
LSM4-203ENST00000593829 TRIM43BA6NCK2 446 aa22.09■■□□□ 1.13
LSM4-203ENST00000593829 WDR64B1ANS9 1081 aa22.09■■□□□ 1.13
LSM4-203ENST00000593829 BACH1O14867 736 aa22.09■■□□□ 1.13
LSM4-203ENST00000593829 STAT5BP51692 787 aa22.09■■□□□ 1.13
LSM4-203ENST00000593829 PLPPR4Q7Z2D5 763 aa22.09■■□□□ 1.13
LSM4-203ENST00000593829 SLFN12Q8IYM2 578 aa22.09■■□□□ 1.13
LSM4-203ENST00000593829 HAS1Q92839 578 aa22.09■■□□□ 1.13
LSM4-203ENST00000593829 TRIM43Q96BQ3 446 aaPredicted RBP22.09■■□□□ 1.13
LSM4-203ENST00000593829 KIAA0355O15063 1070 aa22.08■■□□□ 1.13
LSM4-203ENST00000593829 NEMFO60524 1076 aa22.08■■□□□ 1.13
LSM4-203ENST00000593829 PSAPP07602 524 aa22.08■■□□□ 1.13
LSM4-203ENST00000593829 SFNP31947 248 aa22.08■■□□□ 1.13
LSM4-203ENST00000593829 CALCRLQ16602 461 aa22.08■■□□□ 1.13
LSM4-203ENST00000593829 FAM160B1Q5W0V3 765 aa22.08■■□□□ 1.13
LSM4-203ENST00000593829 PDCL3Q9H2J4 239 aa22.08■■□□□ 1.13
LSM4-203ENST00000593829 UNC45AQ9H3U1 944 aa22.08■■□□□ 1.13
LSM4-203ENST00000593829 RNPEPQ9H4A4 650 aa22.08■■□□□ 1.13
LSM4-203ENST00000593829 DISC1Q9NRI5 854 aa22.08■■□□□ 1.13
LSM4-203ENST00000593829 TBX21Q9UL17 535 aa22.08■■□□□ 1.13
LSM4-203ENST00000593829 ZDHHC9Q9Y397 364 aa22.08■■□□□ 1.13
LSM4-203ENST00000593829 CHMP2AO43633 222 aa22.08■■□□□ 1.12
LSM4-203ENST00000593829 SMIM10L2AP0DMW4 78 aa22.08■■□□□ 1.12
LSM4-203ENST00000593829 SMIM10L2BP0DMW5 78 aa22.08■■□□□ 1.12
LSM4-203ENST00000593829 MARK3P27448 753 aa22.08■■□□□ 1.12
LSM4-203ENST00000593829 MCM7P33993 719 aa22.08■■□□□ 1.12
LSM4-203ENST00000593829 JAK3P52333 1124 aa22.08■■□□□ 1.12
LSM4-203ENST00000593829 ORC2Q13416 577 aaPredicted RBP22.08■■□□□ 1.12
LSM4-203ENST00000593829 PTGISQ16647 500 aa22.08■■□□□ 1.12
LSM4-203ENST00000593829 TTC38Q5R3I4 469 aa22.08■■□□□ 1.12
LSM4-203ENST00000593829 PRPF38BQ5VTL8 546 aaKnown RBP22.08■■□□□ 1.12
LSM4-203ENST00000593829 GDF6Q6KF10 455 aaPredicted RBP22.08■■□□□ 1.12
LSM4-203ENST00000593829 RBSNQ9H1K0 784 aa22.08■■□□□ 1.12
LSM4-203ENST00000593829 ZNF302Q9NR11 478 aa22.08■■□□□ 1.12
LSM4-203ENST00000593829 NOD1Q9Y239 953 aa22.08■■□□□ 1.12
LSM4-203ENST00000593829 MBD3O95983 291 aa22.07■■□□□ 1.12
LSM4-203ENST00000593829 SLC26A2P50443 739 aa22.07■■□□□ 1.12
LSM4-203ENST00000593829 SWSAP1Q6NVH7 229 aa22.07■■□□□ 1.12
LSM4-203ENST00000593829 B3GNT9Q6UX72 402 aa22.07■■□□□ 1.12
LSM4-203ENST00000593829 CCDC60Q8IWA6 550 aaPredicted RBP22.07■■□□□ 1.12
LSM4-203ENST00000593829 RDM1Q8NG50 284 aa22.07■■□□□ 1.12
LSM4-203ENST00000593829 AFAP1L1Q8TED9 768 aa22.07■■□□□ 1.12
LSM4-203ENST00000593829 VPS37CA5D8V6 355 aaPredicted RBP22.06■■□□□ 1.12
LSM4-203ENST00000593829 SYT1P21579 422 aa22.06■■□□□ 1.12
LSM4-203ENST00000593829 ZNF174Q15697 407 aa22.06■■□□□ 1.12
LSM4-203ENST00000593829 LRSAM1Q6UWE0 723 aa22.06■■□□□ 1.12
LSM4-203ENST00000593829 C17orf102A2RUQ5 167 aa22.06■■□□□ 1.12
LSM4-203ENST00000593829 RAG1P15918 1043 aa22.06■■□□□ 1.12
LSM4-203ENST00000593829 PPP2R5CQ13362 524 aa22.06■■□□□ 1.12
LSM4-203ENST00000593829 MIER3Q7Z3K6 550 aa22.06■■□□□ 1.12
LSM4-203ENST00000593829 GPT2Q8TD30 523 aa22.06■■□□□ 1.12
LSM4-203ENST00000593829 VAV3Q9UKW4 847 aa22.06■■□□□ 1.12
LSM4-203ENST00000593829 GNAT1P11488 350 aa22.05■■□□□ 1.12
LSM4-203ENST00000593829 TOB1P50616 345 aaPredicted RBP22.05■■□□□ 1.12
LSM4-203ENST00000593829 PKP1Q13835 747 aa22.05■■□□□ 1.12
LSM4-203ENST00000593829 PDXDC2PQ6P474 469 aa22.05■■□□□ 1.12
LSM4-203ENST00000593829 LBHD1Q9BQE6 289 aaPredicted RBP22.05■■□□□ 1.12
LSM4-203ENST00000593829 NRCAMQ92823 1304 aa22.05■■□□□ 1.12
LSM4-203ENST00000593829 TIMP1P01033 207 aa22.04■■□□□ 1.12
LSM4-203ENST00000593829 CYP2C9P11712 490 aa22.04■■□□□ 1.12
LSM4-203ENST00000593829 HOXC8P31273 242 aa22.04■■□□□ 1.12
LSM4-203ENST00000593829 PLCB4Q15147 1175 aa22.04■■□□□ 1.12
LSM4-203ENST00000593829 RILPL1Q5EBL4 403 aa22.04■■□□□ 1.12
LSM4-203ENST00000593829 MTMR9Q96QG7 549 aa22.04■■□□□ 1.12
LSM4-203ENST00000593829 HIPK3Q9H422 1215 aa22.04■■□□□ 1.12
LSM4-203ENST00000593829 SETD4Q9NVD3 440 aa22.04■■□□□ 1.12
LSM4-203ENST00000593829 GABBR1Q9UBS5 961 aa22.04■■□□□ 1.12
LSM4-203ENST00000593829 PCDHA12Q9UN75 941 aa22.04■■□□□ 1.12
LSM4-203ENST00000593829 MAFBQ9Y5Q3 323 aaPredicted RBP22.04■■□□□ 1.12
LSM4-203ENST00000593829 ZNF200P98182 395 aaPredicted RBP22.04■■□□□ 1.12
LSM4-203ENST00000593829 HIC1Q14526 733 aa22.04■■□□□ 1.12
LSM4-203ENST00000593829 ATP6V0A1Q93050 837 aa22.04■■□□□ 1.12
LSM4-203ENST00000593829 TMEM60Q9H2L4 133 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms