RNA–Protein interactions for RNA: ENST00000592905.5

ERCC1-217, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-217ENST00000592905 ZNF746Q6NUN9 644 aaPredicted RBP17.13■□□□□ 0.33
ERCC1-217ENST00000592905 MIS18BP1Q6P0N0 1132 aa17.13■□□□□ 0.33
ERCC1-217ENST00000592905 MOXD1Q6UVY6 613 aa17.13■□□□□ 0.33
ERCC1-217ENST00000592905 TRMT1LQ7Z2T5 733 aaKnown RBP17.13■□□□□ 0.33
ERCC1-217ENST00000592905 DEFB128Q7Z7B8 93 aa17.13■□□□□ 0.33
ERCC1-217ENST00000592905 FBXO18Q8NFZ0 1043 aa17.13■□□□□ 0.33
ERCC1-217ENST00000592905 ETNPPLQ8TBG4 499 aa17.13■□□□□ 0.33
ERCC1-217ENST00000592905 LMBR1Q8WVP7 490 aa17.13■□□□□ 0.33
ERCC1-217ENST00000592905 ZBTB10Q96DT7 871 aa17.13■□□□□ 0.33
ERCC1-217ENST00000592905 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.13■□□□□ 0.333e-7■■□□□ 11.7
ERCC1-217ENST00000592905 UNC45AQ9H3U1 944 aa17.13■□□□□ 0.33
ERCC1-217ENST00000592905 TCEAL9Q9UHQ7 104 aa17.13■□□□□ 0.33
ERCC1-217ENST00000592905 SAMM50Q9Y512 469 aa17.13■□□□□ 0.33
ERCC1-217ENST00000592905 TANC1Q9C0D5 1861 aa17.13■□□□□ 0.33
ERCC1-217ENST00000592905 IGKV6D-21A0A0A0MT36 114 aa17.12■□□□□ 0.33
ERCC1-217ENST00000592905 A0A1W2PPC1 479 aa17.12■□□□□ 0.33
ERCC1-217ENST00000592905 SOX1O00570 391 aaPredicted RBP17.12■□□□□ 0.33
ERCC1-217ENST00000592905 PSMD10O75832 226 aa17.12■□□□□ 0.33
ERCC1-217ENST00000592905 IQCF3P0C7M6 154 aa17.12■□□□□ 0.33
ERCC1-217ENST00000592905 CKBP12277 381 aa17.12■□□□□ 0.33
ERCC1-217ENST00000592905 HOXC8P31273 242 aa17.12■□□□□ 0.33
ERCC1-217ENST00000592905 KRT76Q01546 638 aa17.12■□□□□ 0.33
ERCC1-217ENST00000592905 PPFIA1Q13136 1202 aa17.12■□□□□ 0.33
ERCC1-217ENST00000592905 GRIK4Q16099 956 aa17.12■□□□□ 0.33
ERCC1-217ENST00000592905 TRIM71Q2Q1W2 868 aaKnown RBP17.12■□□□□ 0.33
ERCC1-217ENST00000592905 TMEM240Q5SV17 173 aa17.12■□□□□ 0.33
ERCC1-217ENST00000592905 PPP4R3AQ6IN85 833 aa17.12■□□□□ 0.33
ERCC1-217ENST00000592905 ZNF365Q70YC5 407 aa17.12■□□□□ 0.33
ERCC1-217ENST00000592905 PLPPR4Q7Z2D5 763 aa17.12■□□□□ 0.33
ERCC1-217ENST00000592905 SERINC5Q86VE9 423 aa17.12■□□□□ 0.33
ERCC1-217ENST00000592905 IL27Q8NEV9 243 aa17.12■□□□□ 0.33
ERCC1-217ENST00000592905 TRAPPC12Q8WVT3 735 aa17.12■□□□□ 0.33
ERCC1-217ENST00000592905 VWCEQ96DN2 955 aa17.12■□□□□ 0.33
ERCC1-217ENST00000592905 RIT2Q99578 217 aa17.12■□□□□ 0.33
ERCC1-217ENST00000592905 TEKT3Q9BXF9 490 aa17.12■□□□□ 0.33
ERCC1-217ENST00000592905 IL23AQ9NPF7 189 aa17.12■□□□□ 0.33
ERCC1-217ENST00000592905 ZNF302Q9NR11 478 aa17.12■□□□□ 0.33
ERCC1-217ENST00000592905 TRPC6Q9Y210 931 aa17.12■□□□□ 0.33
ERCC1-217ENST00000592905 PITPNM1O00562 1244 aa17.11■□□□□ 0.33
ERCC1-217ENST00000592905 PSAPP07602 524 aa17.11■□□□□ 0.33
ERCC1-217ENST00000592905 INSRRP14616 1297 aa17.11■□□□□ 0.33
ERCC1-217ENST00000592905 ATP4AP20648 1035 aa17.11■□□□□ 0.33
ERCC1-217ENST00000592905 GJB2P29033 226 aa17.11■□□□□ 0.33
ERCC1-217ENST00000592905 THPOP40225 353 aa17.11■□□□□ 0.33
ERCC1-217ENST00000592905 FXR1P51114 621 aaKnown RBP eCLIP17.11■□□□□ 0.33
ERCC1-217ENST00000592905 ADAM17P78536 824 aa17.11■□□□□ 0.33
ERCC1-217ENST00000592905 ZNF618Q5T7W0 954 aa17.11■□□□□ 0.33
ERCC1-217ENST00000592905 FAM160B1Q5W0V3 765 aa17.11■□□□□ 0.33
ERCC1-217ENST00000592905 PDXDC2PQ6P474 469 aa17.11■□□□□ 0.33
ERCC1-217ENST00000592905 POTEDQ86YR6 584 aa17.11■□□□□ 0.33
ERCC1-217ENST00000592905 CCDC155Q8N6L0 562 aa17.11■□□□□ 0.33
ERCC1-217ENST00000592905 DISC1Q9NRI5 854 aa17.11■□□□□ 0.33
ERCC1-217ENST00000592905 GABBR1Q9UBS5 961 aa17.11■□□□□ 0.33
ERCC1-217ENST00000592905 PCDHA10Q9Y5I2 948 aa17.11■□□□□ 0.33
ERCC1-217ENST00000592905 NRCAMQ92823 1304 aa17.11■□□□□ 0.33
ERCC1-217ENST00000592905 POTEB3A0JP26 581 aa17.1■□□□□ 0.33
ERCC1-217ENST00000592905 KIF28PB7ZC32 967 aa17.1■□□□□ 0.33
ERCC1-217ENST00000592905 MARCH6O60337 910 aa17.1■□□□□ 0.33
ERCC1-217ENST00000592905 GNAT1P11488 350 aa17.1■□□□□ 0.33
ERCC1-217ENST00000592905 SELPP16109 830 aa17.1■□□□□ 0.33
ERCC1-217ENST00000592905 GCFC2P16383 781 aaKnown RBP17.1■□□□□ 0.33
ERCC1-217ENST00000592905 GNL2Q13823 731 aaKnown RBP17.1■□□□□ 0.33
ERCC1-217ENST00000592905 MARCH8Q5T0T0 291 aa17.1■□□□□ 0.33
ERCC1-217ENST00000592905 POTEBQ6S5H4 581 aa17.1■□□□□ 0.33
ERCC1-217ENST00000592905 RUFY4Q6ZNE9 571 aa17.1■□□□□ 0.33
ERCC1-217ENST00000592905 CKAP2LQ8IYA6 745 aa17.1■□□□□ 0.33
ERCC1-217ENST00000592905 SMAP1Q8IYB5 467 aaPredicted RBP17.1■□□□□ 0.33
ERCC1-217ENST00000592905 CAGE1Q8TC20 777 aa17.1■□□□□ 0.33
ERCC1-217ENST00000592905 AFAP1L1Q8TED9 768 aa17.1■□□□□ 0.33
ERCC1-217ENST00000592905 HAS1Q92839 578 aa17.1■□□□□ 0.33
ERCC1-217ENST00000592905 LRCH3Q96II8 777 aa17.1■□□□□ 0.33
ERCC1-217ENST00000592905 RNPC3Q96LT9 517 aaKnown RBP17.1■□□□□ 0.33
ERCC1-217ENST00000592905 SMC3Q9UQE7 1217 aa17.1■□□□□ 0.33
ERCC1-217ENST00000592905 LOXHD1Q8IVV2 1947 aa17.09■□□□□ 0.33
ERCC1-217ENST00000592905 WDR64B1ANS9 1081 aa17.09■□□□□ 0.33
ERCC1-217ENST00000592905 FGBP02675 491 aa17.09■□□□□ 0.33
ERCC1-217ENST00000592905 GPNMBQ14956 572 aa17.09■□□□□ 0.33
ERCC1-217ENST00000592905 UGCGQ16739 394 aa17.09■□□□□ 0.33
ERCC1-217ENST00000592905 LRRC8DQ7L1W4 858 aa17.09■□□□□ 0.33
ERCC1-217ENST00000592905 OTOP2Q7RTS6 562 aa17.09■□□□□ 0.33
ERCC1-217ENST00000592905 MIER3Q7Z3K6 550 aa17.09■□□□□ 0.33
ERCC1-217ENST00000592905 RPUSD2Q8IZ73 545 aaKnown RBP17.09■□□□□ 0.33
ERCC1-217ENST00000592905 NAP1L4Q99733 375 aaKnown RBP17.09■□□□□ 0.33
ERCC1-217ENST00000592905 FTOQ9C0B1 505 aaKnown RBP eCLIP17.09■□□□□ 0.33
ERCC1-217ENST00000592905 KCNMB3Q9NPA1 279 aa17.09■□□□□ 0.33
ERCC1-217ENST00000592905 EML1O00423 815 aa17.08■□□□□ 0.32
ERCC1-217ENST00000592905 CTSHP09668 335 aa17.08■□□□□ 0.32
ERCC1-217ENST00000592905 TRAF7Q6Q0C0 670 aa17.08■□□□□ 0.32
ERCC1-217ENST00000592905 ATP8B4Q8TF62 1192 aa17.08■□□□□ 0.32
ERCC1-217ENST00000592905 FOXP1Q9H334 677 aaPredicted RBP17.08■□□□□ 0.32
ERCC1-217ENST00000592905 TUBE1Q9UJT0 475 aa17.08■□□□□ 0.32
ERCC1-217ENST00000592905 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.08■□□□□ 0.32
ERCC1-217ENST00000592905 MAFBQ9Y5Q3 323 aaPredicted RBP17.08■□□□□ 0.32
ERCC1-217ENST00000592905 RRN3P2A6NIE6 340 aa17.07■□□□□ 0.32
ERCC1-217ENST00000592905 ZNF862O60290 1169 aa17.07■□□□□ 0.32
ERCC1-217ENST00000592905 NBNO60934 754 aa17.07■□□□□ 0.32
ERCC1-217ENST00000592905 SLC26A2P50443 739 aa17.07■□□□□ 0.32
ERCC1-217ENST00000592905 JAK3P52333 1124 aa17.07■□□□□ 0.32
ERCC1-217ENST00000592905 RBL2Q08999 1139 aa17.07■□□□□ 0.32
ERCC1-217ENST00000592905 MBTPS1Q14703 1052 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms