RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 SIX5Q8N196 739 aa8.64□□□□□ -1.03
VAT1-209ENST00000592388 ZNF689Q96CS4 500 aaPredicted RBP8.64□□□□□ -1.03
VAT1-209ENST00000592388 IL25Q9H293 177 aa8.64□□□□□ -1.03
VAT1-209ENST00000592388 POMKQ9H5K3 350 aa8.64□□□□□ -1.03
VAT1-209ENST00000592388 ERVK-5Q9HDB9 667 aa8.64□□□□□ -1.03
VAT1-209ENST00000592388 FBXL21Q9UKT6 434 aa8.64□□□□□ -1.03
VAT1-209ENST00000592388 KAT6AQ92794 2004 aa8.64□□□□□ -1.03
VAT1-209ENST00000592388 LOC102724159A0A0B4J2E5 919 aa8.63□□□□□ -1.03
VAT1-209ENST00000592388 SOBPA7XYQ1 873 aa8.63□□□□□ -1.03
VAT1-209ENST00000592388 HAS3O00219 553 aa8.63□□□□□ -1.03
VAT1-209ENST00000592388 SRGAP2BP0DMP2 458 aa8.63□□□□□ -1.03
VAT1-209ENST00000592388 NUCB1Q02818 461 aa8.63□□□□□ -1.03
VAT1-209ENST00000592388 ZNF543Q08ER8 600 aa8.63□□□□□ -1.03
VAT1-209ENST00000592388 PWP2Q15269 919 aaKnown RBP8.63□□□□□ -1.03
VAT1-209ENST00000592388 PAN2Q504Q3 1202 aaKnown RBP8.63□□□□□ -1.03
VAT1-209ENST00000592388 SPECC1Q5M775 1068 aa8.63□□□□□ -1.03
VAT1-209ENST00000592388 CCDC62Q6P9F0 684 aa8.63□□□□□ -1.03
VAT1-209ENST00000592388 BTNL9Q6UXG8 535 aa8.63□□□□□ -1.03
VAT1-209ENST00000592388 CHD1LQ86WJ1 897 aa8.63□□□□□ -1.03
VAT1-209ENST00000592388 CLEC4DQ8WXI8 215 aa8.63□□□□□ -1.03
VAT1-209ENST00000592388 APBB2Q92870 758 aa8.63□□□□□ -1.03
VAT1-209ENST00000592388 ATP6V0A1Q93050 837 aa8.63□□□□□ -1.03
VAT1-209ENST00000592388 MPHOSPH6Q99547 160 aaKnown RBP8.63□□□□□ -1.03
VAT1-209ENST00000592388 USP18Q9UMW8 372 aa8.63□□□□□ -1.03
VAT1-209ENST00000592388 LOXHD1Q8IVV2 1947 aa8.62□□□□□ -1.03
VAT1-209ENST00000592388 B4E1Z4 1266 aa8.62□□□□□ -1.03
VAT1-209ENST00000592388 ENPP3O14638 875 aa8.62□□□□□ -1.03
VAT1-209ENST00000592388 KINO60870 393 aaKnown RBP8.62□□□□□ -1.03
VAT1-209ENST00000592388 DGKIO75912 1065 aa8.62□□□□□ -1.03
VAT1-209ENST00000592388 F2P00734 622 aa8.62□□□□□ -1.03
VAT1-209ENST00000592388 WEE2P0C1S8 567 aa8.62□□□□□ -1.03
VAT1-209ENST00000592388 SNHG28P0DPA3 235 aa8.62□□□□□ -1.03
VAT1-209ENST00000592388 RFX1P22670 979 aa8.62□□□□□ -1.03
VAT1-209ENST00000592388 EDNRBP24530 442 aa8.62□□□□□ -1.03
VAT1-209ENST00000592388 ERVFC1P60507 584 aa8.62□□□□□ -1.03
VAT1-209ENST00000592388 LMNB2Q03252 620 aa8.62□□□□□ -1.03
VAT1-209ENST00000592388 USH1GQ495M9 461 aa8.62□□□□□ -1.03
VAT1-209ENST00000592388 TMEM184AQ6ZMB5 413 aa8.62□□□□□ -1.03
VAT1-209ENST00000592388 RNF207Q6ZRF8 634 aa8.62□□□□□ -1.03
VAT1-209ENST00000592388 MFSD6Q6ZSS7 791 aa8.62□□□□□ -1.03
VAT1-209ENST00000592388 GPR161Q8N6U8 529 aaKnown RBP8.62□□□□□ -1.03
VAT1-209ENST00000592388 TDRD5Q8NAT2 981 aaKnown RBP8.62□□□□□ -1.03
VAT1-209ENST00000592388 CDCA3Q99618 268 aaPredicted RBP8.62□□□□□ -1.03
VAT1-209ENST00000592388 UBA5Q9GZZ9 404 aa8.62□□□□□ -1.03
VAT1-209ENST00000592388 DIAPH3Q9NSV4 1193 aa8.62□□□□□ -1.03
VAT1-209ENST00000592388 TCP11L1Q9NUJ3 509 aa8.62□□□□□ -1.03
VAT1-209ENST00000592388 ANGPTL2Q9UKU9 493 aa8.62□□□□□ -1.03
VAT1-209ENST00000592388 FLNBO75369 2602 aaKnown RBP8.62□□□□□ -1.03
VAT1-209ENST00000592388 C17orf102A2RUQ5 167 aa8.61□□□□□ -1.03
VAT1-209ENST00000592388 TREHO43280 583 aa8.61□□□□□ -1.03
VAT1-209ENST00000592388 DCNP07585 359 aaKnown RBP8.61□□□□□ -1.03
VAT1-209ENST00000592388 PDE4AP27815 886 aa8.61□□□□□ -1.03
VAT1-209ENST00000592388 RPS6P62753 249 aaKnown RBP8.61□□□□□ -1.03
VAT1-209ENST00000592388 KCNC3Q14003 757 aa8.61□□□□□ -1.03
VAT1-209ENST00000592388 CDC37Q16543 378 aaPredicted RBP8.61□□□□□ -1.03
VAT1-209ENST00000592388 CES5AQ6NT32 575 aa8.61□□□□□ -1.03
VAT1-209ENST00000592388 ZDHHC14Q8IZN3 488 aa8.61□□□□□ -1.03
VAT1-209ENST00000592388 RWDD1Q9H446 243 aaPredicted RBP8.61□□□□□ -1.03
VAT1-209ENST00000592388 OSBPL3Q9H4L5 887 aa8.61□□□□□ -1.03
VAT1-209ENST00000592388 RNF216Q9NWF9 866 aaPredicted RBP8.61□□□□□ -1.03
VAT1-209ENST00000592388 WDR19Q8NEZ3 1342 aa8.6□□□□□ -1.03
VAT1-209ENST00000592388 FSD2A1L4K1 749 aa8.6□□□□□ -1.03
VAT1-209ENST00000592388 ZNF213O14771 459 aa8.6□□□□□ -1.03
VAT1-209ENST00000592388 SORBS3O60504 671 aa8.6□□□□□ -1.03
VAT1-209ENST00000592388 GHRP10912 638 aa8.6□□□□□ -1.03
VAT1-209ENST00000592388 GSPT1P15170 499 aaKnown RBP8.6□□□□□ -1.03
VAT1-209ENST00000592388 HOXB8P17481 243 aaPredicted RBP8.6□□□□□ -1.03
VAT1-209ENST00000592388 GATMP50440 423 aa8.6□□□□□ -1.03
VAT1-209ENST00000592388 IRX6P78412 446 aaPredicted RBP8.6□□□□□ -1.03
VAT1-209ENST00000592388 APOBRQ0VD83 1088 aa8.6□□□□□ -1.03
VAT1-209ENST00000592388 PLPP4Q5VZY2 271 aa8.6□□□□□ -1.03
VAT1-209ENST00000592388 C1orf210Q8IVY1 113 aa8.6□□□□□ -1.03
VAT1-209ENST00000592388 CMTR2Q8IYT2 770 aaKnown RBP8.6□□□□□ -1.03
VAT1-209ENST00000592388 ENAHQ8N8S7 591 aaPredicted RBP8.6□□□□□ -1.03
VAT1-209ENST00000592388 PNMA1Q8ND90 353 aa8.6□□□□□ -1.03
VAT1-209ENST00000592388 TBC1D5Q92609 795 aa8.6□□□□□ -1.03
VAT1-209ENST00000592388 ESR2Q92731 530 aa8.6□□□□□ -1.03
VAT1-209ENST00000592388 SECISBP2LQ93073 1101 aaKnown RBP8.6□□□□□ -1.03
VAT1-209ENST00000592388 NECTIN4Q96NY8 510 aa8.6□□□□□ -1.03
VAT1-209ENST00000592388 ADAM7Q9H2U9 754 aa8.6□□□□□ -1.03
VAT1-209ENST00000592388 RNF41Q9H4P4 317 aaPredicted RBP8.6□□□□□ -1.03
VAT1-209ENST00000592388 COL20A1Q9P218 1284 aa8.6□□□□□ -1.03
VAT1-209ENST00000592388 CACNA1IQ9P0X4 2223 aa8.6□□□□□ -1.03
VAT1-209ENST00000592388 WDR81Q562E7 1941 aa8.59□□□□□ -1.03
VAT1-209ENST00000592388 B4DLN1 442 aa8.59□□□□□ -1.03
VAT1-209ENST00000592388 NARSO43776 548 aaKnown RBP8.59□□□□□ -1.03
VAT1-209ENST00000592388 CFHP08603 1231 aa8.59□□□□□ -1.03
VAT1-209ENST00000592388 PCP11498 1178 aaKnown RBP8.59□□□□□ -1.03
VAT1-209ENST00000592388 IBSPP21815 317 aaPredicted RBP8.59□□□□□ -1.03
VAT1-209ENST00000592388 MRPL12P52815 198 aaKnown RBP8.59□□□□□ -1.03
VAT1-209ENST00000592388 MFAP1P55081 439 aaKnown RBP8.59□□□□□ -1.03
VAT1-209ENST00000592388 TBC1D8BQ0IIM8 1120 aa8.59□□□□□ -1.03
VAT1-209ENST00000592388 TDGQ13569 410 aa8.59□□□□□ -1.03
VAT1-209ENST00000592388 TPRNQ4KMQ1 711 aa8.59□□□□□ -1.03
VAT1-209ENST00000592388 SPOUT1Q5T280 376 aaKnown RBP8.59□□□□□ -1.03
VAT1-209ENST00000592388 PLCD3Q8N3E9 789 aa8.59□□□□□ -1.03
VAT1-209ENST00000592388 STAG2Q8N3U4 1231 aa8.59□□□□□ -1.03
VAT1-209ENST00000592388 DNERQ8NFT8 737 aa8.59□□□□□ -1.03
VAT1-209ENST00000592388 TTC14Q96N46 770 aa8.59□□□□□ -1.03
VAT1-209ENST00000592388 ZSCAN10Q96SZ4 725 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms